Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 MIR1263-201ENST00000408324 86 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 SNORD75.2-201ENST00000408784 58 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 AC022028.1-201ENST00000412054 408 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU7-134P-201ENST00000458997 64 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 MIR548S-201ENST00000581352 82 ntBASIC-1.55□□□□□ -2.66
TRAV38-1A0A0B4J264 SNORA33.2-201ENST00000365413 134 ntBASIC-1.56□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-746P-201ENST00000384112 109 ntBASIC-1.56□□□□□ -2.66
TRAV38-1A0A0B4J264 RNY3P14-201ENST00000384309 102 ntBASIC-1.56□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.56□□□□□ -2.66
TRAV38-1A0A0B4J264 MIR29B1-201ENST00000385015 81 ntBASIC-1.56□□□□□ -2.66
TRAV38-1A0A0B4J264 MIR548A1-201ENST00000385041 97 ntBASIC-1.56□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.56□□□□□ -2.66
TRAV38-1A0A0B4J264 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.56□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.57□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.57□□□□□ -2.66
TRAV38-1A0A0B4J264 SNORD63.1-201ENST00000516178 80 ntBASIC-1.57□□□□□ -2.66
TRAV38-1A0A0B4J264 MIR3064-201ENST00000581130 66 ntBASIC-1.57□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-816P-201ENST00000390914 107 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU7-197P-201ENST00000458836 62 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 AL513043.2-201ENST00000573941 143 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 MIR6818-201ENST00000621576 65 ntBASIC-1.58□□□□□ -2.66
TRAV38-1A0A0B4J264 SNORD115-33-201ENST00000363723 82 ntBASIC-1.59□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-639P-201ENST00000384074 107 ntBASIC-1.59□□□□□ -2.66
TRAV38-1A0A0B4J264 SNORA26.4-201ENST00000391188 123 ntBASIC-1.59□□□□□ -2.66
TRAV38-1A0A0B4J264 RNU6-924P-201ENST00000362926 108 ntBASIC-1.6□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.6□□□□□ -2.67
TRAV38-1A0A0B4J264 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.6□□□□□ -2.67
TRAV38-1A0A0B4J264 MIR577-201ENST00000385196 96 ntBASIC-1.6□□□□□ -2.67
TRAV38-1A0A0B4J264 MIR548U-201ENST00000390728 81 ntBASIC-1.6□□□□□ -2.67
TRAV38-1A0A0B4J264 MIR1255B2-201ENST00000408618 67 ntBASIC-1.6□□□□□ -2.67
TRAV38-1A0A0B4J264 snoU13.17-201ENST00000458802 104 ntBASIC-1.6□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU4-32P-201ENST00000363404 141 ntBASIC-1.61□□□□□ -2.67
TRAV38-1A0A0B4J264 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.61□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-915P-201ENST00000364943 103 ntBASIC-1.61□□□□□ -2.67
TRAV38-1A0A0B4J264 SNORA33.1-201ENST00000364957 130 ntBASIC-1.61□□□□□ -2.67
TRAV38-1A0A0B4J264 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.61□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-460P-201ENST00000391158 108 ntBASIC-1.61□□□□□ -2.67
TRAV38-1A0A0B4J264 AC104996.3-201ENST00000590718 94 ntBASIC-1.61□□□□□ -2.67
TRAV38-1A0A0B4J264 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.62□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-260P-201ENST00000384092 107 ntBASIC-1.62□□□□□ -2.67
TRAV38-1A0A0B4J264 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.62□□□□□ -2.67
TRAV38-1A0A0B4J264 MIR548F4-201ENST00000408515 105 ntBASIC-1.62□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-706P-201ENST00000517229 104 ntBASIC-1.62□□□□□ -2.67
TRAV38-1A0A0B4J264 AC022559.1-201ENST00000520905 205 ntBASIC-1.62□□□□□ -2.67
TRAV38-1A0A0B4J264 RNY4P6-201ENST00000363667 96 ntBASIC-1.63□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.63□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-382P-201ENST00000365181 106 ntBASIC-1.63□□□□□ -2.67
TRAV38-1A0A0B4J264 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.63□□□□□ -2.67
TRAV38-1A0A0B4J264 SNORD90-201ENST00000391145 111 ntBASIC-1.63□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU4-71P-201ENST00000516258 113 ntBASIC-1.63□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-781P-201ENST00000516377 101 ntBASIC-1.63□□□□□ -2.67
TRAV38-1A0A0B4J264 MIR4320-201ENST00000636981 65 ntBASIC-1.63□□□□□ -2.67
TRAV38-1A0A0B4J264 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.64□□□□□ -2.67
TRAV38-1A0A0B4J264 RNA5SP331-201ENST00000364986 107 ntBASIC-1.64□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU4-11P-201ENST00000365287 132 ntBASIC-1.64□□□□□ -2.67
TRAV38-1A0A0B4J264 SNORD4B-201ENST00000459083 72 ntBASIC-1.64□□□□□ -2.67
TRAV38-1A0A0B4J264 RNA5SP147-201ENST00000516493 109 ntBASIC-1.64□□□□□ -2.67
TRAV38-1A0A0B4J264 CYP3A54P-201ENST00000566950 75 ntBASIC-1.64□□□□□ -2.67
TRAV38-1A0A0B4J264 AC138207.3-201ENST00000585289 166 ntBASIC-1.64□□□□□ -2.67
TRAV38-1A0A0B4J264 AL627230.5-201ENST00000619807 58 ntBASIC-1.64□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-151P-201ENST00000364158 107 ntBASIC-1.65□□□□□ -2.67
TRAV38-1A0A0B4J264 SNORD115-22-201ENST00000364456 82 ntBASIC-1.65□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.65□□□□□ -2.67
TRAV38-1A0A0B4J264 MIR527-201ENST00000385244 85 ntBASIC-1.65□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU6-576P-201ENST00000390854 102 ntBASIC-1.65□□□□□ -2.67
TRAV38-1A0A0B4J264 MIR8485-201ENST00000401372 91 ntBASIC-1.65□□□□□ -2.67
TRAV38-1A0A0B4J264 MTCYBP6-201ENST00000441810 138 ntBASIC-1.65□□□□□ -2.67
TRAV38-1A0A0B4J264 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.65□□□□□ -2.67
TRAV38-1A0A0B4J264 RNU2-51P-201ENST00000410708 197 ntBASIC-1.66□□□□□ -2.68
TRAV38-1A0A0B4J264 RNU4-61P-201ENST00000411243 107 ntBASIC-1.66□□□□□ -2.68
TRAV38-1A0A0B4J264 RNU6-62P-201ENST00000516526 102 ntBASIC-1.66□□□□□ -2.68
TRAV38-1A0A0B4J264 MIR4694-201ENST00000578534 80 ntBASIC-1.66□□□□□ -2.68
TRAV38-1A0A0B4J264 MIR3165-201ENST00000579874 75 ntBASIC-1.66□□□□□ -2.68
TRAV38-1A0A0B4J264 AC006254.2-201ENST00000603259 279 ntBASIC-1.66□□□□□ -2.68
TRAV38-1A0A0B4J264 AC141273.2-201ENST00000618989 130 ntBASIC-1.66□□□□□ -2.68
TRAV38-1A0A0B4J264 RNU6-832P-201ENST00000363319 107 ntBASIC-1.67□□□□□ -2.68
TRAV38-1A0A0B4J264 RNA5SP192-201ENST00000364404 120 ntBASIC-1.67□□□□□ -2.68
TRAV38-1A0A0B4J264 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.67□□□□□ -2.68
TRAV38-1A0A0B4J264 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.67□□□□□ -2.68
TRAV38-1A0A0B4J264 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.67□□□□□ -2.68
TRAV38-1A0A0B4J264 RNA5SP292-201ENST00000390974 118 ntBASIC-1.67□□□□□ -2.68
TRAV38-1A0A0B4J264 SNORA81.3-201ENST00000517283 198 ntBASIC-1.67□□□□□ -2.68
TRAV38-1A0A0B4J264 MIR3613-201ENST00000579844 87 ntBASIC-1.67□□□□□ -2.68
TRAV38-1A0A0B4J264 RNA5SP26-201ENST00000362406 119 ntBASIC-1.68□□□□□ -2.68
TRAV38-1A0A0B4J264 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.68□□□□□ -2.68
TRAV38-1A0A0B4J264 MIR203A-201ENST00000384836 110 ntBASIC-1.68□□□□□ -2.68
TRAV38-1A0A0B4J264 RNU6-644P-201ENST00000391155 98 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 311.9 ms