Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 MIR599-201ENST00000385069 95 ntBASIC0.9□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-243P-201ENST00000391140 107 ntBASIC0.9□□□□□ -2.27
NR2E3Q9Y5X4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.9□□□□□ -2.27
NR2E3Q9Y5X4 MIR6086-201ENST00000638065 55 ntBASIC0.9□□□□□ -2.27
NR2E3Q9Y5X4 Y_RNA.283-201ENST00000364798 112 ntBASIC0.89□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-524P-201ENST00000384270 107 ntBASIC0.89□□□□□ -2.27
NR2E3Q9Y5X4 Y_RNA.609-201ENST00000410669 89 ntBASIC0.89□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-267P-201ENST00000516714 103 ntBASIC0.89□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-762P-201ENST00000517107 102 ntBASIC0.89□□□□□ -2.27
NR2E3Q9Y5X4 Y_RNA.17-201ENST00000362433 111 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 RNA5SP403-201ENST00000363598 108 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 RNA5SP117-201ENST00000365294 118 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-675P-201ENST00000384236 104 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-402P-201ENST00000410678 103 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 Y_RNA.620-201ENST00000411009 88 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 RNU7-161P-201ENST00000517289 62 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 MIR6866-201ENST00000638146 69 ntBASIC0.88□□□□□ -2.27
NR2E3Q9Y5X4 MIR18A-201ENST00000362310 71 ntBASIC0.87□□□□□ -2.27
NR2E3Q9Y5X4 SNORD18A-201ENST00000363753 72 ntBASIC0.87□□□□□ -2.27
NR2E3Q9Y5X4 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
NR2E3Q9Y5X4 MIR3678-201ENST00000578455 94 ntBASIC0.87□□□□□ -2.27
NR2E3Q9Y5X4 MIR4668-201ENST00000582284 70 ntBASIC0.87□□□□□ -2.27
NR2E3Q9Y5X4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.87□□□□□ -2.27
NR2E3Q9Y5X4 TRDV1-202ENST00000621643 102 ntBASIC0.87□□□□□ -2.27
NR2E3Q9Y5X4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.87□□□□□ -2.27
NR2E3Q9Y5X4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
NR2E3Q9Y5X4 SNORD115-27-201ENST00000364430 82 ntBASIC0.86□□□□□ -2.27
NR2E3Q9Y5X4 AC098934.3-201ENST00000430450 190 ntBASIC0.86□□□□□ -2.27
NR2E3Q9Y5X4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.86□□□□□ -2.27
NR2E3Q9Y5X4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.86□□□□□ -2.27
NR2E3Q9Y5X4 U6.100-201ENST00000636230 99 ntBASIC0.86□□□□□ -2.27
NR2E3Q9Y5X4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.85□□□□□ -2.27
NR2E3Q9Y5X4 SNORD73B-201ENST00000364394 72 ntBASIC0.85□□□□□ -2.27
NR2E3Q9Y5X4 Y_RNA.558-201ENST00000384685 113 ntBASIC0.85□□□□□ -2.27
NR2E3Q9Y5X4 SNORD28-201ENST00000384706 75 ntBASIC0.85□□□□□ -2.27
NR2E3Q9Y5X4 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
NR2E3Q9Y5X4 RNA5SP222-201ENST00000411039 105 ntBASIC0.85□□□□□ -2.27
NR2E3Q9Y5X4 AC006254.2-201ENST00000603259 279 ntBASIC0.85□□□□□ -2.27
NR2E3Q9Y5X4 AC243829.3-201ENST00000622177 108 ntBASIC0.85□□□□□ -2.27
NR2E3Q9Y5X4 SNORD115-24-201ENST00000363528 82 ntBASIC0.84□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-1134P-201ENST00000365156 101 ntBASIC0.84□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-132P-201ENST00000383863 107 ntBASIC0.84□□□□□ -2.27
NR2E3Q9Y5X4 RNY1P8-201ENST00000383970 114 ntBASIC0.84□□□□□ -2.27
NR2E3Q9Y5X4 SNORD116-22-201ENST00000384430 92 ntBASIC0.84□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-519P-201ENST00000410590 108 ntBASIC0.84□□□□□ -2.27
NR2E3Q9Y5X4 RNA5SP47-201ENST00000517230 109 ntBASIC0.84□□□□□ -2.27
NR2E3Q9Y5X4 RNU6-633P-201ENST00000362612 103 ntBASIC0.83□□□□□ -2.28
NR2E3Q9Y5X4 RNU6-135P-201ENST00000516769 101 ntBASIC0.83□□□□□ -2.28
NR2E3Q9Y5X4 MIR4639-201ENST00000584938 69 ntBASIC0.83□□□□□ -2.28
NR2E3Q9Y5X4 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
NR2E3Q9Y5X4 AC062037.1-201ENST00000605302 128 ntBASIC0.83□□□□□ -2.28
NR2E3Q9Y5X4 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
NR2E3Q9Y5X4 RNU6-466P-201ENST00000391224 103 ntBASIC0.82□□□□□ -2.28
NR2E3Q9Y5X4 RNU6-469P-201ENST00000516253 101 ntBASIC0.82□□□□□ -2.28
NR2E3Q9Y5X4 AC244669.1-204ENST00000621564 178 ntBASIC0.82□□□□□ -2.28
NR2E3Q9Y5X4 MIR5087-201ENST00000635826 76 ntBASIC0.82□□□□□ -2.28
NR2E3Q9Y5X4 SNORA36.1-201ENST00000363424 132 ntBASIC0.81□□□□□ -2.28
NR2E3Q9Y5X4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.81□□□□□ -2.28
NR2E3Q9Y5X4 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
NR2E3Q9Y5X4 MIR548AG2-201ENST00000581228 64 ntBASIC0.81□□□□□ -2.28
NR2E3Q9Y5X4 MIR3920-201ENST00000581751 86 ntBASIC0.81□□□□□ -2.28
NR2E3Q9Y5X4 MIR4536-1-201ENST00000583537 88 ntBASIC0.81□□□□□ -2.28
NR2E3Q9Y5X4 MIR6828-201ENST00000636181 60 ntBASIC0.81□□□□□ -2.28
NR2E3Q9Y5X4 RNU6-509P-201ENST00000363519 107 ntBASIC0.8□□□□□ -2.28
NR2E3Q9Y5X4 RNA5SP292-201ENST00000390974 118 ntBASIC0.8□□□□□ -2.28
NR2E3Q9Y5X4 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.8□□□□□ -2.28
NR2E3Q9Y5X4 MIR3064-201ENST00000581130 66 ntBASIC0.8□□□□□ -2.28
NR2E3Q9Y5X4 MIR4696-201ENST00000581431 70 ntBASIC0.8□□□□□ -2.28
NR2E3Q9Y5X4 MIRLET7F1-201ENST00000362202 87 ntBASIC0.79□□□□□ -2.28
NR2E3Q9Y5X4 Y_RNA.73-201ENST00000362910 113 ntBASIC0.79□□□□□ -2.28
NR2E3Q9Y5X4 Y_RNA.388-201ENST00000383919 113 ntBASIC0.79□□□□□ -2.28
NR2E3Q9Y5X4 MIR450A2-201ENST00000385022 100 ntBASIC0.79□□□□□ -2.28
NR2E3Q9Y5X4 RNA5SP285-201ENST00000516619 119 ntBASIC0.79□□□□□ -2.28
NR2E3Q9Y5X4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
NR2E3Q9Y5X4 SNORA36.2-201ENST00000384004 127 ntBASIC0.78□□□□□ -2.28
NR2E3Q9Y5X4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
NR2E3Q9Y5X4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.78□□□□□ -2.28
NR2E3Q9Y5X4 RNU6-65P-201ENST00000516332 98 ntBASIC0.78□□□□□ -2.28
NR2E3Q9Y5X4 RNU7-153P-201ENST00000516455 62 ntBASIC0.78□□□□□ -2.28
NR2E3Q9Y5X4 RNA5SP94-201ENST00000516917 108 ntBASIC0.78□□□□□ -2.28
NR2E3Q9Y5X4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.78□□□□□ -2.29
NR2E3Q9Y5X4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
NR2E3Q9Y5X4 MIR494-201ENST00000349529 81 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 RNU6-664P-201ENST00000362381 107 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 RNU6-726P-201ENST00000364680 107 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 SNORD41.1-201ENST00000391000 69 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 RNY4P29-201ENST00000410801 97 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 RNU7-104P-201ENST00000459398 79 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 AC104996.3-201ENST00000590718 94 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 MIR2909-201ENST00000617113 69 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 MIR548BB-201ENST00000626714 66 ntBASIC0.77□□□□□ -2.29
NR2E3Q9Y5X4 RNU4-32P-201ENST00000363404 141 ntBASIC0.76□□□□□ -2.29
NR2E3Q9Y5X4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.76□□□□□ -2.29
NR2E3Q9Y5X4 RNU6-979P-201ENST00000383896 107 ntBASIC0.76□□□□□ -2.29
NR2E3Q9Y5X4 RNU6-811P-201ENST00000384069 107 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms