Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 Y_RNA.239-201ENST00000364444 113 ntBASIC1.24□□□□□ -2.21
SIT1Q9Y3P8 SNORD101-201ENST00000384027 73 ntBASIC1.24□□□□□ -2.21
SIT1Q9Y3P8 SNORA31.14-201ENST00000516728 116 ntBASIC1.24□□□□□ -2.21
SIT1Q9Y3P8 MIR4696-201ENST00000581431 70 ntBASIC1.24□□□□□ -2.21
SIT1Q9Y3P8 U6.100-201ENST00000636230 99 ntBASIC1.24□□□□□ -2.21
SIT1Q9Y3P8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SIT1Q9Y3P8 Y_RNA.244-201ENST00000364484 109 ntBASIC1.23□□□□□ -2.21
SIT1Q9Y3P8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SIT1Q9Y3P8 RPS29P23-201ENST00000458635 123 ntBASIC1.23□□□□□ -2.21
SIT1Q9Y3P8 AC002350.1-201ENST00000490759 375 ntBASIC1.23□□□□□ -2.21
SIT1Q9Y3P8 RNU6-135P-201ENST00000516769 101 ntBASIC1.23□□□□□ -2.21
SIT1Q9Y3P8 RNA5SP403-201ENST00000363598 108 ntBASIC1.22□□□□□ -2.21
SIT1Q9Y3P8 RNU6-478P-201ENST00000363904 110 ntBASIC1.22□□□□□ -2.21
SIT1Q9Y3P8 MIR520H-201ENST00000385126 88 ntBASIC1.22□□□□□ -2.21
SIT1Q9Y3P8 SNORD105-201ENST00000386910 85 ntBASIC1.22□□□□□ -2.21
SIT1Q9Y3P8 SNORD115-44-201ENST00000365391 82 ntBASIC1.21□□□□□ -2.22
SIT1Q9Y3P8 AL450471.1-201ENST00000447509 127 ntBASIC1.21□□□□□ -2.22
SIT1Q9Y3P8 MIRLET7A1-201ENST00000362295 80 ntBASIC1.2□□□□□ -2.22
SIT1Q9Y3P8 Y_RNA.264-201ENST00000364665 102 ntBASIC1.2□□□□□ -2.22
SIT1Q9Y3P8 RNU6-686P-201ENST00000364839 107 ntBASIC1.2□□□□□ -2.22
SIT1Q9Y3P8 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
SIT1Q9Y3P8 SNORD89-201ENST00000390981 114 ntBASIC1.2□□□□□ -2.22
SIT1Q9Y3P8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.2□□□□□ -2.22
SIT1Q9Y3P8 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
SIT1Q9Y3P8 AC025627.3-201ENST00000582078 182 ntBASIC1.2□□□□□ -2.22
SIT1Q9Y3P8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
SIT1Q9Y3P8 Y_RNA.221-201ENST00000364248 96 ntBASIC1.19□□□□□ -2.22
SIT1Q9Y3P8 SNORD114-24-201ENST00000365029 72 ntBASIC1.19□□□□□ -2.22
SIT1Q9Y3P8 RNU6-935P-201ENST00000410371 100 ntBASIC1.19□□□□□ -2.22
SIT1Q9Y3P8 RNA5SP436-201ENST00000516020 115 ntBASIC1.19□□□□□ -2.22
SIT1Q9Y3P8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.19□□□□□ -2.22
SIT1Q9Y3P8 RNY4P3-201ENST00000365254 95 ntBASIC1.18□□□□□ -2.22
SIT1Q9Y3P8 SNORD77.2-201ENST00000391045 68 ntBASIC1.18□□□□□ -2.22
SIT1Q9Y3P8 RNU6-955P-201ENST00000410497 104 ntBASIC1.18□□□□□ -2.22
SIT1Q9Y3P8 SNORD124-201ENST00000459577 104 ntBASIC1.18□□□□□ -2.22
SIT1Q9Y3P8 RNA5SP61-201ENST00000516453 100 ntBASIC1.18□□□□□ -2.22
SIT1Q9Y3P8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
SIT1Q9Y3P8 RNU6-1094P-201ENST00000362416 104 ntBASIC1.17□□□□□ -2.22
SIT1Q9Y3P8 SNORD115-24-201ENST00000363528 82 ntBASIC1.17□□□□□ -2.22
SIT1Q9Y3P8 Y_RNA.207-201ENST00000364142 106 ntBASIC1.17□□□□□ -2.22
SIT1Q9Y3P8 RNA5SP117-201ENST00000365294 118 ntBASIC1.17□□□□□ -2.22
SIT1Q9Y3P8 RNU6-1051P-201ENST00000365471 102 ntBASIC1.17□□□□□ -2.22
SIT1Q9Y3P8 MIR942-201ENST00000401111 86 ntBASIC1.17□□□□□ -2.22
SIT1Q9Y3P8 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.17□□□□□ -2.22
SIT1Q9Y3P8 MIR26B-201ENST00000362251 77 ntBASIC1.16□□□□□ -2.22
SIT1Q9Y3P8 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
SIT1Q9Y3P8 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
SIT1Q9Y3P8 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
SIT1Q9Y3P8 RNU6-380P-201ENST00000410207 107 ntBASIC1.16□□□□□ -2.22
SIT1Q9Y3P8 RNU7-161P-201ENST00000517289 62 ntBASIC1.16□□□□□ -2.22
SIT1Q9Y3P8 MIR4639-201ENST00000584938 69 ntBASIC1.16□□□□□ -2.22
SIT1Q9Y3P8 MIR4662A-201ENST00000637499 67 ntBASIC1.16□□□□□ -2.22
SIT1Q9Y3P8 Y_RNA.374-201ENST00000365606 101 ntBASIC1.15□□□□□ -2.23
SIT1Q9Y3P8 RNU6-1296P-201ENST00000383879 107 ntBASIC1.15□□□□□ -2.23
SIT1Q9Y3P8 SNORD90-201ENST00000391145 111 ntBASIC1.15□□□□□ -2.23
SIT1Q9Y3P8 U3.27-201ENST00000391237 200 ntBASIC1.15□□□□□ -2.23
SIT1Q9Y3P8 RNA5SP255-201ENST00000516370 107 ntBASIC1.15□□□□□ -2.23
SIT1Q9Y3P8 MIR5000-201ENST00000577717 103 ntBASIC1.15□□□□□ -2.23
SIT1Q9Y3P8 RN7SL793P-201ENST00000583259 296 ntBASIC1.15□□□□□ -2.23
SIT1Q9Y3P8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SIT1Q9Y3P8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
SIT1Q9Y3P8 RNU6-208P-201ENST00000362431 107 ntBASIC1.14□□□□□ -2.23
SIT1Q9Y3P8 RNU5F-1-201ENST00000362507 117 ntBASIC1.14□□□□□ -2.23
SIT1Q9Y3P8 RNU6-161P-201ENST00000363051 106 ntBASIC1.14□□□□□ -2.23
SIT1Q9Y3P8 RNU6-287P-201ENST00000516230 98 ntBASIC1.14□□□□□ -2.23
SIT1Q9Y3P8 RNU7-13P-201ENST00000516413 62 ntBASIC1.14□□□□□ -2.23
SIT1Q9Y3P8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
SIT1Q9Y3P8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SIT1Q9Y3P8 RNU6-1126P-201ENST00000384002 107 ntBASIC1.13□□□□□ -2.23
SIT1Q9Y3P8 MIR3920-201ENST00000581751 86 ntBASIC1.13□□□□□ -2.23
SIT1Q9Y3P8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.13□□□□□ -2.23
SIT1Q9Y3P8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SIT1Q9Y3P8 SNORA24B-201ENST00000384176 131 ntBASIC1.12□□□□□ -2.23
SIT1Q9Y3P8 SNORD28-201ENST00000384706 75 ntBASIC1.12□□□□□ -2.23
SIT1Q9Y3P8 RNU6-469P-201ENST00000516253 101 ntBASIC1.12□□□□□ -2.23
SIT1Q9Y3P8 RNU6-1108P-201ENST00000516308 104 ntBASIC1.12□□□□□ -2.23
SIT1Q9Y3P8 AC068338.1-201ENST00000565567 176 ntBASIC1.12□□□□□ -2.23
SIT1Q9Y3P8 AC211469.2-201ENST00000605461 205 ntBASIC1.12□□□□□ -2.23
SIT1Q9Y3P8 AC145423.2-201ENST00000610631 239 ntBASIC1.12□□□□□ -2.23
SIT1Q9Y3P8 RNU6-776P-201ENST00000364403 104 ntBASIC1.11□□□□□ -2.23
SIT1Q9Y3P8 RNU6-1022P-201ENST00000365049 104 ntBASIC1.11□□□□□ -2.23
SIT1Q9Y3P8 MIR451A-201ENST00000385059 72 ntBASIC1.11□□□□□ -2.23
SIT1Q9Y3P8 MIR216A-201ENST00000385063 110 ntBASIC1.11□□□□□ -2.23
SIT1Q9Y3P8 MIR644A-201ENST00000385262 94 ntBASIC1.11□□□□□ -2.23
SIT1Q9Y3P8 MIR216B-201ENST00000390186 82 ntBASIC1.11□□□□□ -2.23
SIT1Q9Y3P8 MIR1297-201ENST00000637311 77 ntBASIC1.11□□□□□ -2.23
SIT1Q9Y3P8 RNU6-1335P-201ENST00000365426 107 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 MIR150-201ENST00000385048 84 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 SNORD41.1-201ENST00000391000 69 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 snoU13.17-201ENST00000458802 104 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 MIR2113-201ENST00000459007 91 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 RNU6-1057P-201ENST00000517162 102 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 MIR3612-201ENST00000579753 87 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 YWHAEP2-201ENST00000580066 112 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 MIR548AG2-201ENST00000581228 64 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 YWHAEP3-201ENST00000582767 121 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 AC067863.3-201ENST00000624172 122 ntBASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
SIT1Q9Y3P8 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
SIT1Q9Y3P8 SNORD18A-201ENST00000363753 72 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms