Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU7-161P-201ENST00000517289 62 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 TRDV1-202ENST00000621643 102 ntBASIC0.72□□□□□ -2.29
SSX2IPQ9Y2D8 RNU6-957P-201ENST00000363652 99 ntBASIC0.71□□□□□ -2.3
SSX2IPQ9Y2D8 MIR488-201ENST00000365739 83 ntBASIC0.71□□□□□ -2.3
SSX2IPQ9Y2D8 RNU6-65P-201ENST00000516332 98 ntBASIC0.71□□□□□ -2.3
SSX2IPQ9Y2D8 RNU6-1265P-201ENST00000516342 103 ntBASIC0.71□□□□□ -2.3
SSX2IPQ9Y2D8 MIR4536-1-201ENST00000583537 88 ntBASIC0.71□□□□□ -2.3
SSX2IPQ9Y2D8 MIR8087-201ENST00000612745 78 ntBASIC0.71□□□□□ -2.3
SSX2IPQ9Y2D8 AC067863.3-201ENST00000624172 122 ntBASIC0.71□□□□□ -2.3
SSX2IPQ9Y2D8 Y_RNA.433-201ENST00000384089 102 ntBASIC0.7□□□□□ -2.3
SSX2IPQ9Y2D8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
SSX2IPQ9Y2D8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.7□□□□□ -2.3
SSX2IPQ9Y2D8 RNU7-104P-201ENST00000459398 79 ntBASIC0.7□□□□□ -2.3
SSX2IPQ9Y2D8 RNU7-13P-201ENST00000516413 62 ntBASIC0.7□□□□□ -2.3
SSX2IPQ9Y2D8 MIR6828-201ENST00000636181 60 ntBASIC0.7□□□□□ -2.3
SSX2IPQ9Y2D8 RNA5SP257-201ENST00000363023 116 ntBASIC0.69□□□□□ -2.3
SSX2IPQ9Y2D8 SNORD115-44-201ENST00000365391 82 ntBASIC0.69□□□□□ -2.3
SSX2IPQ9Y2D8 AL161932.1-201ENST00000437408 146 ntBASIC0.69□□□□□ -2.3
SSX2IPQ9Y2D8 SNORD4B-201ENST00000459083 72 ntBASIC0.69□□□□□ -2.3
SSX2IPQ9Y2D8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.69□□□□□ -2.3
SSX2IPQ9Y2D8 RNU6-1131P-201ENST00000364955 107 ntBASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 RNU6-716P-201ENST00000365621 103 ntBASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 MIR548L-201ENST00000408303 86 ntBASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 Y_RNA.609-201ENST00000410669 89 ntBASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 RNU7-85P-201ENST00000458851 63 ntBASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 RNA5SP170-201ENST00000517150 101 ntBASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.68□□□□□ -2.3
SSX2IPQ9Y2D8 RNY1P8-201ENST00000383970 114 ntBASIC0.67□□□□□ -2.3
SSX2IPQ9Y2D8 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
SSX2IPQ9Y2D8 RNA5SP268-201ENST00000516828 124 ntBASIC0.67□□□□□ -2.3
SSX2IPQ9Y2D8 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
SSX2IPQ9Y2D8 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
SSX2IPQ9Y2D8 MIR330-201ENST00000362196 94 ntBASIC0.66□□□□□ -2.3
SSX2IPQ9Y2D8 SNORA36.1-201ENST00000363424 132 ntBASIC0.66□□□□□ -2.3
SSX2IPQ9Y2D8 RNA5SP227-201ENST00000516184 113 ntBASIC0.66□□□□□ -2.3
SSX2IPQ9Y2D8 RNU6-844P-201ENST00000517175 102 ntBASIC0.66□□□□□ -2.3
SSX2IPQ9Y2D8 AC026421.1-201ENST00000519101 163 ntBASIC0.66□□□□□ -2.3
SSX2IPQ9Y2D8 RNU6-726P-201ENST00000364680 107 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 Y_RNA.369-201ENST00000365568 117 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 SNORD116-22-201ENST00000384430 92 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 RNY1P7-201ENST00000384743 110 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 SNORD41.1-201ENST00000391000 69 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-75P-201ENST00000515944 104 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 MIR5582-201ENST00000579697 68 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 MIR3920-201ENST00000581751 86 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 U6.100-201ENST00000636230 99 ntBASIC0.65□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-1298P-201ENST00000362456 101 ntBASIC0.64□□□□□ -2.31
SSX2IPQ9Y2D8 RNA5SP62-201ENST00000363457 110 ntBASIC0.64□□□□□ -2.31
SSX2IPQ9Y2D8 RNA5SP517-201ENST00000364724 117 ntBASIC0.64□□□□□ -2.31
SSX2IPQ9Y2D8 SNORD101-201ENST00000384027 73 ntBASIC0.64□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-49P-201ENST00000384256 107 ntBASIC0.64□□□□□ -2.31
SSX2IPQ9Y2D8 SNORA8.2-201ENST00000384372 139 ntBASIC0.64□□□□□ -2.31
SSX2IPQ9Y2D8 MIR548U-201ENST00000390728 81 ntBASIC0.64□□□□□ -2.31
SSX2IPQ9Y2D8 RNU7-74P-201ENST00000459104 62 ntBASIC0.64□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-664P-201ENST00000362381 107 ntBASIC0.63□□□□□ -2.31
SSX2IPQ9Y2D8 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
SSX2IPQ9Y2D8 MIR4696-201ENST00000581431 70 ntBASIC0.63□□□□□ -2.31
SSX2IPQ9Y2D8 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
SSX2IPQ9Y2D8 Y_RNA.239-201ENST00000364444 113 ntBASIC0.62□□□□□ -2.31
SSX2IPQ9Y2D8 MIR1197-201ENST00000408818 88 ntBASIC0.62□□□□□ -2.31
SSX2IPQ9Y2D8 SNORD71-201ENST00000411292 86 ntBASIC0.62□□□□□ -2.31
SSX2IPQ9Y2D8 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
SSX2IPQ9Y2D8 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
SSX2IPQ9Y2D8 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
SSX2IPQ9Y2D8 Y_RNA.207-201ENST00000364142 106 ntBASIC0.61□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-287P-201ENST00000516230 98 ntBASIC0.61□□□□□ -2.31
SSX2IPQ9Y2D8 RNA5SP395-201ENST00000516567 118 ntBASIC0.61□□□□□ -2.31
SSX2IPQ9Y2D8 MIR4668-201ENST00000582284 70 ntBASIC0.61□□□□□ -2.31
SSX2IPQ9Y2D8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
SSX2IPQ9Y2D8 SNORD118-201ENST00000363593 134 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-294P-201ENST00000364999 102 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-1134P-201ENST00000365156 101 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-811P-201ENST00000384069 107 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 MIR617-201ENST00000385030 97 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-1057P-201ENST00000517162 102 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 MIR7107-201ENST00000611489 80 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.6□□□□□ -2.31
SSX2IPQ9Y2D8 MIR518A1-201ENST00000385068 85 ntBASIC0.59□□□□□ -2.31
SSX2IPQ9Y2D8 MIR1236-201ENST00000408340 102 ntBASIC0.59□□□□□ -2.31
SSX2IPQ9Y2D8 RNU6-935P-201ENST00000410371 100 ntBASIC0.59□□□□□ -2.31
SSX2IPQ9Y2D8 RN7SKP12-201ENST00000516275 143 ntBASIC0.59□□□□□ -2.31
SSX2IPQ9Y2D8 AL162376.1-201ENST00000624117 175 ntBASIC0.59□□□□□ -2.31
SSX2IPQ9Y2D8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 MIRLET7F1-201ENST00000362202 87 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 Y_RNA.43-201ENST00000362670 111 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 RNU4-32P-201ENST00000363404 141 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 RNU6-509P-201ENST00000363519 107 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 MIR2113-201ENST00000459007 91 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 MIR3064-201ENST00000581130 66 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 AC104996.3-201ENST00000590718 94 ntBASIC0.58□□□□□ -2.32
SSX2IPQ9Y2D8 RNU6-633P-201ENST00000362612 103 ntBASIC0.57□□□□□ -2.32
SSX2IPQ9Y2D8 RNU6-132P-201ENST00000383863 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms