Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 MIR19B1-201ENST00000384829 87 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 SNORD105-201ENST00000386910 85 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 RNU6-1052P-201ENST00000411398 104 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 U7.7-201ENST00000459276 60 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 RNU6-719P-201ENST00000516671 104 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 YWHAEP2-201ENST00000580066 112 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 YWHAEP3-201ENST00000582767 121 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 AL353770.2-201ENST00000620024 78 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 MIR1297-201ENST00000637311 77 ntBASIC1.64□□□□□ -2.15
NOD1Q9Y239 RNA5SP403-201ENST00000363598 108 ntBASIC1.63□□□□□ -2.15
NOD1Q9Y239 AC073261.1-201ENST00000429409 121 ntBASIC1.63□□□□□ -2.15
NOD1Q9Y239 RNU6-303P-201ENST00000517091 106 ntBASIC1.63□□□□□ -2.15
NOD1Q9Y239 RNU7-161P-201ENST00000517289 62 ntBASIC1.63□□□□□ -2.15
NOD1Q9Y239 Y_RNA.545-201ENST00000384652 105 ntBASIC1.62□□□□□ -2.15
NOD1Q9Y239 MIR644A-201ENST00000385262 94 ntBASIC1.62□□□□□ -2.15
NOD1Q9Y239 MIR942-201ENST00000401111 86 ntBASIC1.62□□□□□ -2.15
NOD1Q9Y239 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
NOD1Q9Y239 MIR6078-201ENST00000611069 100 ntBASIC1.62□□□□□ -2.15
NOD1Q9Y239 MIR200A-201ENST00000384875 90 ntBASIC1.61□□□□□ -2.15
NOD1Q9Y239 SNORD124-201ENST00000459577 104 ntBASIC1.61□□□□□ -2.15
NOD1Q9Y239 MIR6504-201ENST00000613520 61 ntBASIC1.61□□□□□ -2.15
NOD1Q9Y239 Y_RNA.371-201ENST00000365591 113 ntBASIC1.6□□□□□ -2.15
NOD1Q9Y239 MIR1276-201ENST00000408707 83 ntBASIC1.6□□□□□ -2.15
NOD1Q9Y239 RNU7-104P-201ENST00000459398 79 ntBASIC1.6□□□□□ -2.15
NOD1Q9Y239 MIR3134-201ENST00000579433 74 ntBASIC1.6□□□□□ -2.15
NOD1Q9Y239 MIR2113-201ENST00000459007 91 ntBASIC1.59□□□□□ -2.15
NOD1Q9Y239 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.59□□□□□ -2.15
NOD1Q9Y239 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
NOD1Q9Y239 SNORA25.8-201ENST00000364831 128 ntBASIC1.58□□□□□ -2.16
NOD1Q9Y239 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
NOD1Q9Y239 AC074348.1-201ENST00000426503 132 ntBASIC1.58□□□□□ -2.16
NOD1Q9Y239 RNU1-123P-201ENST00000458950 160 ntBASIC1.58□□□□□ -2.16
NOD1Q9Y239 RNU6-469P-201ENST00000516253 101 ntBASIC1.58□□□□□ -2.16
NOD1Q9Y239 RNU6-135P-201ENST00000516769 101 ntBASIC1.58□□□□□ -2.16
NOD1Q9Y239 MIR3920-201ENST00000581751 86 ntBASIC1.58□□□□□ -2.16
NOD1Q9Y239 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.58□□□□□ -2.16
NOD1Q9Y239 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NOD1Q9Y239 RNU6-1126P-201ENST00000384002 107 ntBASIC1.57□□□□□ -2.16
NOD1Q9Y239 SNORA24B-201ENST00000384176 131 ntBASIC1.57□□□□□ -2.16
NOD1Q9Y239 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
NOD1Q9Y239 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
NOD1Q9Y239 RNU6-340P-201ENST00000364005 107 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 U3.27-201ENST00000391237 200 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 snoU13.18-201ENST00000459483 104 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 AC004223.1-201ENST00000479840 271 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 AC097510.1-201ENST00000510945 133 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 RNA5SP102-201ENST00000516865 106 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 MIR548AG2-201ENST00000581228 64 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 AC067863.3-201ENST00000624172 122 ntBASIC1.56□□□□□ -2.16
NOD1Q9Y239 RNU2-59P-201ENST00000410482 191 ntBASIC1.55□□□□□ -2.16
NOD1Q9Y239 RNU6-70P-201ENST00000516438 60 ntBASIC1.55□□□□□ -2.16
NOD1Q9Y239 Y_RNA.681-201ENST00000516445 113 ntBASIC1.55□□□□□ -2.16
NOD1Q9Y239 RNU6-681P-201ENST00000364012 104 ntBASIC1.54□□□□□ -2.16
NOD1Q9Y239 RNU6-1335P-201ENST00000365426 107 ntBASIC1.54□□□□□ -2.16
NOD1Q9Y239 RNU6-411P-201ENST00000384451 107 ntBASIC1.54□□□□□ -2.16
NOD1Q9Y239 RNA5SP404-201ENST00000517118 132 ntBASIC1.54□□□□□ -2.16
NOD1Q9Y239 MIR4639-201ENST00000584938 69 ntBASIC1.54□□□□□ -2.16
NOD1Q9Y239 SNORD114-24-201ENST00000365029 72 ntBASIC1.53□□□□□ -2.16
NOD1Q9Y239 Y_RNA.606-201ENST00000410579 103 ntBASIC1.53□□□□□ -2.16
NOD1Q9Y239 RNU6-523P-201ENST00000516304 54 ntBASIC1.53□□□□□ -2.16
NOD1Q9Y239 AC025627.3-201ENST00000582078 182 ntBASIC1.53□□□□□ -2.16
NOD1Q9Y239 MIR4452-201ENST00000583004 71 ntBASIC1.53□□□□□ -2.16
NOD1Q9Y239 AL078603.1-201ENST00000603824 313 ntBASIC1.53□□□□□ -2.16
NOD1Q9Y239 AC244669.1-204ENST00000621564 178 ntBASIC1.53□□□□□ -2.16
NOD1Q9Y239 RNU6-824P-201ENST00000363724 104 ntBASIC1.52□□□□□ -2.17
NOD1Q9Y239 SNORD28-201ENST00000384706 75 ntBASIC1.52□□□□□ -2.17
NOD1Q9Y239 MIR573-201ENST00000384964 99 ntBASIC1.52□□□□□ -2.17
NOD1Q9Y239 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
NOD1Q9Y239 Y_RNA.36-201ENST00000362602 112 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 RNU1-124P-201ENST00000363861 145 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 RNU6-154P-201ENST00000384306 106 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 MIR489-201ENST00000384923 84 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 MIR617-201ENST00000385030 97 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 RNU6-1177P-201ENST00000391058 104 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 MIR3612-201ENST00000579753 87 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 U6.81-201ENST00000612550 106 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 MIR664A-201ENST00000626086 82 ntBASIC1.51□□□□□ -2.17
NOD1Q9Y239 SNORA8.1-201ENST00000384250 140 ntBASIC1.5□□□□□ -2.17
NOD1Q9Y239 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
NOD1Q9Y239 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
NOD1Q9Y239 RNU6-330P-201ENST00000363015 107 ntBASIC1.49□□□□□ -2.17
NOD1Q9Y239 SNORD18A-201ENST00000363753 72 ntBASIC1.49□□□□□ -2.17
NOD1Q9Y239 MIR3678-201ENST00000578455 94 ntBASIC1.49□□□□□ -2.17
NOD1Q9Y239 MIR6734-201ENST00000621166 68 ntBASIC1.49□□□□□ -2.17
NOD1Q9Y239 RNU6-42P-201ENST00000384165 107 ntBASIC1.48□□□□□ -2.17
NOD1Q9Y239 MIR519E-201ENST00000385075 84 ntBASIC1.48□□□□□ -2.17
NOD1Q9Y239 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
NOD1Q9Y239 MIR216B-201ENST00000390186 82 ntBASIC1.48□□□□□ -2.17
NOD1Q9Y239 MIR548L-201ENST00000408303 86 ntBASIC1.48□□□□□ -2.17
NOD1Q9Y239 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
NOD1Q9Y239 RNA5SP255-201ENST00000516370 107 ntBASIC1.48□□□□□ -2.17
NOD1Q9Y239 RNU6-1015P-201ENST00000517121 99 ntBASIC1.48□□□□□ -2.17
NOD1Q9Y239 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
NOD1Q9Y239 RNA5SP220-201ENST00000516298 104 ntBASIC1.47□□□□□ -2.17
NOD1Q9Y239 MIR4773-1-201ENST00000637203 78 ntBASIC1.47□□□□□ -2.17
NOD1Q9Y239 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
NOD1Q9Y239 AC139453.2-201ENST00000487255 133 ntBASIC1.46□□□□□ -2.18
NOD1Q9Y239 RNA5SP47-201ENST00000517230 109 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 247.7 ms