Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-957P-201ENST00000363652 99 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 RNU6-675P-201ENST00000384236 104 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 Y_RNA.620-201ENST00000411009 88 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 AC011195.1-201ENST00000578177 177 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 MIR4536-1-201ENST00000583537 88 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
DKK3Q9UBP4 MIR330-201ENST00000362196 94 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MIR18A-201ENST00000362310 71 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 Y_RNA.17-201ENST00000362433 111 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 RNU6-1134P-201ENST00000365156 101 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 SNORD28-201ENST00000384706 75 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MIR644A-201ENST00000385262 94 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 RNU6-75P-201ENST00000515944 104 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 RNU6-65P-201ENST00000516332 98 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MIR3678-201ENST00000578455 94 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 TRDV1-202ENST00000621643 102 ntBASIC0.83□□□□□ -2.28
DKK3Q9UBP4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
DKK3Q9UBP4 RNU6-633P-201ENST00000362612 103 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 SNORD115-24-201ENST00000363528 82 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 RNU6-219P-201ENST00000364728 107 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 RNU6-35P-201ENST00000384530 107 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.82□□□□□ -2.28
DKK3Q9UBP4 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
DKK3Q9UBP4 SNORD18A-201ENST00000363753 72 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 RNU6-497P-201ENST00000365316 104 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 MIR450A2-201ENST00000385022 100 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 Y_RNA.593-201ENST00000410292 98 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 RNU6-402P-201ENST00000410678 103 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 RNU7-161P-201ENST00000517289 62 ntBASIC0.81□□□□□ -2.28
DKK3Q9UBP4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.8□□□□□ -2.28
DKK3Q9UBP4 RNA5SP47-201ENST00000517230 109 ntBASIC0.8□□□□□ -2.28
DKK3Q9UBP4 MIR4679-1-201ENST00000637619 75 ntBASIC0.8□□□□□ -2.28
DKK3Q9UBP4 SNORD115-44-201ENST00000365391 82 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 RNU6-820P-201ENST00000384273 107 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 MIR1302-4-201ENST00000408701 150 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 AC244669.1-204ENST00000621564 178 ntBASIC0.79□□□□□ -2.28
DKK3Q9UBP4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.78□□□□□ -2.28
DKK3Q9UBP4 SNORD73B-201ENST00000364394 72 ntBASIC0.78□□□□□ -2.28
DKK3Q9UBP4 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
DKK3Q9UBP4 U6.100-201ENST00000636230 99 ntBASIC0.78□□□□□ -2.28
DKK3Q9UBP4 RNU6-509P-201ENST00000363519 107 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 RNU6-811P-201ENST00000384069 107 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 MIR548U-201ENST00000390728 81 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 MIR1236-201ENST00000408340 102 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 IGLL4P-201ENST00000614590 133 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 AC067863.3-201ENST00000624172 122 ntBASIC0.77□□□□□ -2.29
DKK3Q9UBP4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
DKK3Q9UBP4 RNU6-664P-201ENST00000362381 107 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 SNORD101-201ENST00000384027 73 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR519C-201ENST00000385053 87 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.76□□□□□ -2.29
DKK3Q9UBP4 RNU7-13P-201ENST00000516413 62 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 RNU6-267P-201ENST00000516714 103 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR3064-201ENST00000581130 66 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR4696-201ENST00000581431 70 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR3920-201ENST00000581751 86 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR6086-201ENST00000638065 55 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
DKK3Q9UBP4 RNY1P1-201ENST00000364372 112 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 SNORD41.1-201ENST00000391000 69 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 RNU6-762P-201ENST00000517107 102 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 AC104996.3-201ENST00000590718 94 ntBASIC0.75□□□□□ -2.29
DKK3Q9UBP4 RNU6-726P-201ENST00000364680 107 ntBASIC0.74□□□□□ -2.29
DKK3Q9UBP4 RNU6-132P-201ENST00000383863 107 ntBASIC0.74□□□□□ -2.29
DKK3Q9UBP4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
DKK3Q9UBP4 RNU7-104P-201ENST00000459398 79 ntBASIC0.74□□□□□ -2.29
DKK3Q9UBP4 RNA5SP94-201ENST00000516917 108 ntBASIC0.74□□□□□ -2.29
DKK3Q9UBP4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
DKK3Q9UBP4 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 SNORD115-27-201ENST00000364430 82 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 Y_RNA.239-201ENST00000364444 113 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 MIR1197-201ENST00000408818 88 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 MIR4711-201ENST00000578274 70 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 AC062037.1-201ENST00000605302 128 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 MIR548BB-201ENST00000626714 66 ntBASIC0.73□□□□□ -2.29
DKK3Q9UBP4 RNU4-32P-201ENST00000363404 141 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 Y_RNA.491-201ENST00000384417 107 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 MIR140-201ENST00000385282 100 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 RNU6-287P-201ENST00000516230 98 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 RN7SKP12-201ENST00000516275 143 ntBASIC0.72□□□□□ -2.29
DKK3Q9UBP4 MIRLET7F1-201ENST00000362202 87 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms