Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.72□□□□□ -2.29
VSX1Q9NZR4 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
VSX1Q9NZR4 MIR617-201ENST00000385030 97 ntBASIC0.72□□□□□ -2.29
VSX1Q9NZR4 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
VSX1Q9NZR4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.72□□□□□ -2.29
VSX1Q9NZR4 MIR3064-201ENST00000581130 66 ntBASIC0.72□□□□□ -2.29
VSX1Q9NZR4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.72□□□□□ -2.29
VSX1Q9NZR4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 RNU6-726P-201ENST00000364680 107 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 RNU6-497P-201ENST00000365316 104 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 Y_RNA.491-201ENST00000384417 107 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 Y_RNA.593-201ENST00000410292 98 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 AC093729.1-201ENST00000513074 128 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 RNA5SP227-201ENST00000516184 113 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 RNU6-287P-201ENST00000516230 98 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 RNA5SP268-201ENST00000516828 124 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 U6.100-201ENST00000636230 99 ntBASIC0.71□□□□□ -2.3
VSX1Q9NZR4 RNU4-32P-201ENST00000363404 141 ntBASIC0.7□□□□□ -2.3
VSX1Q9NZR4 SNORA25.9-201ENST00000365087 128 ntBASIC0.7□□□□□ -2.3
VSX1Q9NZR4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.7□□□□□ -2.3
VSX1Q9NZR4 Y_RNA.426-201ENST00000384068 113 ntBASIC0.7□□□□□ -2.3
VSX1Q9NZR4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
VSX1Q9NZR4 RNU6-242P-201ENST00000384359 107 ntBASIC0.69□□□□□ -2.3
VSX1Q9NZR4 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
VSX1Q9NZR4 SNORD73B-201ENST00000364394 72 ntBASIC0.68□□□□□ -2.3
VSX1Q9NZR4 SNORA8.2-201ENST00000384372 139 ntBASIC0.68□□□□□ -2.3
VSX1Q9NZR4 SNORA18.5-201ENST00000516616 101 ntBASIC0.68□□□□□ -2.3
VSX1Q9NZR4 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
VSX1Q9NZR4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
VSX1Q9NZR4 SNORA40.8-201ENST00000411034 126 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 SNORD71-201ENST00000411292 86 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 MIR2113-201ENST00000459007 91 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 RPS29P1-201ENST00000465274 159 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 RNU6-848P-201ENST00000515948 107 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 RNU6-863P-201ENST00000515989 104 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 RNU6-617P-201ENST00000516147 107 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 RNU6-473P-201ENST00000516164 107 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 MIR4796-201ENST00000580742 81 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 MIR548BB-201ENST00000626714 66 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 AC073869.9-201ENST00000641610 120 ntBASIC0.67□□□□□ -2.3
VSX1Q9NZR4 MIRLET7F1-201ENST00000362202 87 ntBASIC0.66□□□□□ -2.3
VSX1Q9NZR4 SNORA36.1-201ENST00000363424 132 ntBASIC0.66□□□□□ -2.3
VSX1Q9NZR4 RNU6-132P-201ENST00000383863 107 ntBASIC0.66□□□□□ -2.3
VSX1Q9NZR4 SNORA26.2-201ENST00000390922 122 ntBASIC0.66□□□□□ -2.3
VSX1Q9NZR4 RN7SKP12-201ENST00000516275 143 ntBASIC0.66□□□□□ -2.3
VSX1Q9NZR4 SNORA72.7-201ENST00000516349 94 ntBASIC0.66□□□□□ -2.3
VSX1Q9NZR4 AL162376.1-201ENST00000624117 175 ntBASIC0.66□□□□□ -2.3
VSX1Q9NZR4 MIR499A-201ENST00000384903 122 ntBASIC0.65□□□□□ -2.31
VSX1Q9NZR4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
VSX1Q9NZR4 Y_RNA.611-201ENST00000410682 108 ntBASIC0.65□□□□□ -2.31
VSX1Q9NZR4 RNU6-267P-201ENST00000516714 103 ntBASIC0.65□□□□□ -2.31
VSX1Q9NZR4 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.65□□□□□ -2.31
VSX1Q9NZR4 AC006160.2-201ENST00000637708 154 ntBASIC0.65□□□□□ -2.31
VSX1Q9NZR4 SNORA63.2-201ENST00000362603 126 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 SNORD118-201ENST00000363593 134 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 RNA5SP517-201ENST00000364724 117 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 RNU6-716P-201ENST00000365621 103 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 RNU6-979P-201ENST00000383896 107 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 RNU6-1152P-201ENST00000384576 107 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 Y_RNA.607-201ENST00000410597 98 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 MIR5588-201ENST00000581890 63 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 MIR6504-201ENST00000613520 61 ntBASIC0.64□□□□□ -2.31
VSX1Q9NZR4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
VSX1Q9NZR4 Y_RNA.191-201ENST00000363972 113 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 SNORD115-27-201ENST00000364430 82 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 Y_RNA.264-201ENST00000364665 102 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 RNA5SP292-201ENST00000390974 118 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 RNU7-171P-201ENST00000459581 62 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 Y_RNA.660-201ENST00000516002 120 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 SNORA25.13-201ENST00000516395 103 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 MIR5706-201ENST00000579841 80 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 MIR4679-1-201ENST00000637619 75 ntBASIC0.63□□□□□ -2.31
VSX1Q9NZR4 MIR494-201ENST00000349529 81 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 RNU5F-1-201ENST00000362507 117 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 RNU6-1051P-201ENST00000365471 102 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 MIR451A-201ENST00000385059 72 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 MIR519E-201ENST00000385075 84 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 RNY4P29-201ENST00000410801 97 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 FGF7P7-201ENST00000514120 227 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 RNU6-762P-201ENST00000517107 102 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 AC140658.3-201ENST00000567603 271 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 MIR4452-201ENST00000583004 71 ntBASIC0.62□□□□□ -2.31
VSX1Q9NZR4 RNU6-624P-201ENST00000363411 107 ntBASIC0.61□□□□□ -2.31
VSX1Q9NZR4 MIR518A1-201ENST00000385068 85 ntBASIC0.61□□□□□ -2.31
VSX1Q9NZR4 RNU2-59P-201ENST00000410482 191 ntBASIC0.61□□□□□ -2.31
VSX1Q9NZR4 AC022137.1-201ENST00000483735 151 ntBASIC0.61□□□□□ -2.31
VSX1Q9NZR4 MIR548AG2-201ENST00000581228 64 ntBASIC0.61□□□□□ -2.31
VSX1Q9NZR4 MIR7107-201ENST00000611489 80 ntBASIC0.61□□□□□ -2.31
VSX1Q9NZR4 MIR1287-201ENST00000408492 90 ntBASIC0.6□□□□□ -2.31
VSX1Q9NZR4 RNA5SP247-201ENST00000411181 105 ntBASIC0.6□□□□□ -2.31
VSX1Q9NZR4 RNU6-557P-201ENST00000516842 110 ntBASIC0.6□□□□□ -2.31
VSX1Q9NZR4 AC062037.1-201ENST00000605302 128 ntBASIC0.6□□□□□ -2.31
VSX1Q9NZR4 U7.6-201ENST00000610841 64 ntBASIC0.6□□□□□ -2.31
VSX1Q9NZR4 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
VSX1Q9NZR4 RNU1-141P-201ENST00000364623 158 ntBASIC0.59□□□□□ -2.31
VSX1Q9NZR4 RNU6-1276P-201ENST00000365372 104 ntBASIC0.59□□□□□ -2.31
VSX1Q9NZR4 RNU6-269P-201ENST00000391077 97 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 399.3 ms