Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 RNA5SP47-201ENST00000517230 109 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 TRDV1-202ENST00000621643 102 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 U6.100-201ENST00000636230 99 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 Y_RNA.221-201ENST00000364248 96 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 Y_RNA.620-201ENST00000411009 88 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 RNU6-267P-201ENST00000516714 103 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 MIR4668-201ENST00000582284 70 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 MIR4639-201ENST00000584938 69 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 MIR6828-201ENST00000636181 60 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 MIR4679-1-201ENST00000637619 75 ntBASIC0.61□□□□□ -2.31
DDX43Q9NXZ2 Y_RNA.17-201ENST00000362433 111 ntBASIC0.6□□□□□ -2.31
DDX43Q9NXZ2 SNORA36.1-201ENST00000363424 132 ntBASIC0.6□□□□□ -2.31
DDX43Q9NXZ2 SNORD115-24-201ENST00000363528 82 ntBASIC0.6□□□□□ -2.31
DDX43Q9NXZ2 SNORD115-27-201ENST00000364430 82 ntBASIC0.6□□□□□ -2.31
DDX43Q9NXZ2 RNU6-402P-201ENST00000410678 103 ntBASIC0.6□□□□□ -2.31
DDX43Q9NXZ2 RNU6-135P-201ENST00000516769 101 ntBASIC0.6□□□□□ -2.31
DDX43Q9NXZ2 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
DDX43Q9NXZ2 AC244669.1-204ENST00000621564 178 ntBASIC0.6□□□□□ -2.31
DDX43Q9NXZ2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 RNU6-132P-201ENST00000383863 107 ntBASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 RNU6-466P-201ENST00000391224 103 ntBASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 RNU6-762P-201ENST00000517107 102 ntBASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
DDX43Q9NXZ2 RNU6-633P-201ENST00000362612 103 ntBASIC0.58□□□□□ -2.32
DDX43Q9NXZ2 RNU4-45P-201ENST00000365469 141 ntBASIC0.58□□□□□ -2.32
DDX43Q9NXZ2 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
DDX43Q9NXZ2 SNORD116-22-201ENST00000384430 92 ntBASIC0.58□□□□□ -2.32
DDX43Q9NXZ2 RNU6-519P-201ENST00000410590 108 ntBASIC0.58□□□□□ -2.32
DDX43Q9NXZ2 RNA5SP94-201ENST00000516917 108 ntBASIC0.58□□□□□ -2.32
DDX43Q9NXZ2 MIR548AG2-201ENST00000581228 64 ntBASIC0.58□□□□□ -2.32
DDX43Q9NXZ2 MIR3920-201ENST00000581751 86 ntBASIC0.58□□□□□ -2.32
DDX43Q9NXZ2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 RNA5SP457-201ENST00000363657 124 ntBASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 Y_RNA.558-201ENST00000384685 113 ntBASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 SNORD41.1-201ENST00000391000 69 ntBASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 MIR3064-201ENST00000581130 66 ntBASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 MIR4696-201ENST00000581431 70 ntBASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
DDX43Q9NXZ2 RNU6-509P-201ENST00000363519 107 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 SNORD73B-201ENST00000364394 72 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 RNU6-726P-201ENST00000364680 107 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 RNU6-1134P-201ENST00000365156 101 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 RNA5SP292-201ENST00000390974 118 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 RNU6-469P-201ENST00000516253 101 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 MIR4536-1-201ENST00000583537 88 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 AC006254.2-201ENST00000603259 279 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 AC062037.1-201ENST00000605302 128 ntBASIC0.56□□□□□ -2.32
DDX43Q9NXZ2 MIRLET7F1-201ENST00000362202 87 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 RNU6-664P-201ENST00000362381 107 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 Y_RNA.207-201ENST00000364142 106 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 Y_RNA.596-201ENST00000410462 109 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 RNU7-104P-201ENST00000459398 79 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 RNU6-65P-201ENST00000516332 98 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
DDX43Q9NXZ2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
DDX43Q9NXZ2 MIR140-201ENST00000385282 100 ntBASIC0.54□□□□□ -2.32
DDX43Q9NXZ2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
DDX43Q9NXZ2 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
DDX43Q9NXZ2 RNU6-287P-201ENST00000516230 98 ntBASIC0.54□□□□□ -2.32
DDX43Q9NXZ2 AC104996.3-201ENST00000590718 94 ntBASIC0.54□□□□□ -2.32
DDX43Q9NXZ2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
DDX43Q9NXZ2 AC243829.3-201ENST00000622177 108 ntBASIC0.54□□□□□ -2.32
DDX43Q9NXZ2 Y_RNA.73-201ENST00000362910 113 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 RNA5SP517-201ENST00000364724 117 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 SNORD115-44-201ENST00000365391 82 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 SNORD101-201ENST00000384027 73 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 RNU6-811P-201ENST00000384069 107 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 MIR450A2-201ENST00000385022 100 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 SNORD90-201ENST00000391145 111 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 RNU7-13P-201ENST00000516413 62 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 RNU7-153P-201ENST00000516455 62 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 AC067863.3-201ENST00000624172 122 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 MIR548BB-201ENST00000626714 66 ntBASIC0.53□□□□□ -2.32
DDX43Q9NXZ2 RNU4-32P-201ENST00000363404 141 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 RNU6-979P-201ENST00000383896 107 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 SNORA8.2-201ENST00000384372 139 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 AC093423.1-201ENST00000440817 142 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 MIR2113-201ENST00000459007 91 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 RN7SKP12-201ENST00000516275 143 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 SNORA18.5-201ENST00000516616 101 ntBASIC0.52□□□□□ -2.33
DDX43Q9NXZ2 RNA5SP268-201ENST00000516828 124 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 354.7 ms