Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
TDP1Q9NUW8 SNORA40.8-201ENST00000411034 126 ntBASIC0.66□□□□□ -2.3
TDP1Q9NUW8 RNU6-75P-201ENST00000515944 104 ntBASIC0.66□□□□□ -2.3
TDP1Q9NUW8 SNORA25.18-201ENST00000607153 114 ntBASIC0.66□□□□□ -2.3
TDP1Q9NUW8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TDP1Q9NUW8 RNA5SP347-201ENST00000362445 119 ntBASIC0.65□□□□□ -2.31
TDP1Q9NUW8 RNY1P4-201ENST00000384595 115 ntBASIC0.65□□□□□ -2.31
TDP1Q9NUW8 RNU6-519P-201ENST00000410590 108 ntBASIC0.65□□□□□ -2.31
TDP1Q9NUW8 MTATP6P29-201ENST00000415057 132 ntBASIC0.65□□□□□ -2.31
TDP1Q9NUW8 RNU6-65P-201ENST00000516332 98 ntBASIC0.65□□□□□ -2.31
TDP1Q9NUW8 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
TDP1Q9NUW8 MIR4536-1-201ENST00000583537 88 ntBASIC0.65□□□□□ -2.31
TDP1Q9NUW8 MIR6779-201ENST00000617283 64 ntBASIC0.65□□□□□ -2.31
TDP1Q9NUW8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.64□□□□□ -2.31
TDP1Q9NUW8 SNORD4B-201ENST00000459083 72 ntBASIC0.64□□□□□ -2.31
TDP1Q9NUW8 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
TDP1Q9NUW8 SNORD115-44-201ENST00000365391 82 ntBASIC0.63□□□□□ -2.31
TDP1Q9NUW8 Y_RNA.609-201ENST00000410669 89 ntBASIC0.63□□□□□ -2.31
TDP1Q9NUW8 SNORD71-201ENST00000411292 86 ntBASIC0.63□□□□□ -2.31
TDP1Q9NUW8 AC026421.1-201ENST00000519101 163 ntBASIC0.63□□□□□ -2.31
TDP1Q9NUW8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.63□□□□□ -2.31
TDP1Q9NUW8 MIR518A1-201ENST00000385068 85 ntBASIC0.62□□□□□ -2.31
TDP1Q9NUW8 RN7SKP12-201ENST00000516275 143 ntBASIC0.62□□□□□ -2.31
TDP1Q9NUW8 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
TDP1Q9NUW8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.61□□□□□ -2.31
TDP1Q9NUW8 SNORD101-201ENST00000384027 73 ntBASIC0.61□□□□□ -2.31
TDP1Q9NUW8 RNY1P7-201ENST00000384743 110 ntBASIC0.61□□□□□ -2.31
TDP1Q9NUW8 RNU6-287P-201ENST00000516230 98 ntBASIC0.61□□□□□ -2.31
TDP1Q9NUW8 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
TDP1Q9NUW8 Y_RNA.694-201ENST00000516677 117 ntBASIC0.61□□□□□ -2.31
TDP1Q9NUW8 MIR548AG2-201ENST00000581228 64 ntBASIC0.61□□□□□ -2.31
TDP1Q9NUW8 MIR4696-201ENST00000581431 70 ntBASIC0.61□□□□□ -2.31
TDP1Q9NUW8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
TDP1Q9NUW8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
TDP1Q9NUW8 RNU6-664P-201ENST00000362381 107 ntBASIC0.6□□□□□ -2.31
TDP1Q9NUW8 Y_RNA.220-201ENST00000364244 109 ntBASIC0.6□□□□□ -2.31
TDP1Q9NUW8 RNU6-1131P-201ENST00000364955 107 ntBASIC0.6□□□□□ -2.31
TDP1Q9NUW8 RNY4P30-201ENST00000410216 95 ntBASIC0.6□□□□□ -2.31
TDP1Q9NUW8 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
TDP1Q9NUW8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.6□□□□□ -2.31
TDP1Q9NUW8 AL162376.1-201ENST00000624117 175 ntBASIC0.6□□□□□ -2.31
TDP1Q9NUW8 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
TDP1Q9NUW8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.59□□□□□ -2.31
TDP1Q9NUW8 Y_RNA.207-201ENST00000364142 106 ntBASIC0.59□□□□□ -2.31
TDP1Q9NUW8 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
TDP1Q9NUW8 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
TDP1Q9NUW8 MIR2113-201ENST00000459007 91 ntBASIC0.59□□□□□ -2.31
TDP1Q9NUW8 MIRLET7F1-201ENST00000362202 87 ntBASIC0.58□□□□□ -2.32
TDP1Q9NUW8 RNU6-49P-201ENST00000384256 107 ntBASIC0.58□□□□□ -2.32
TDP1Q9NUW8 RNU6-269P-201ENST00000391077 97 ntBASIC0.58□□□□□ -2.32
TDP1Q9NUW8 AC069271.1-201ENST00000445577 156 ntBASIC0.58□□□□□ -2.32
TDP1Q9NUW8 SNORD114-23-201ENST00000363536 72 ntBASIC0.57□□□□□ -2.32
TDP1Q9NUW8 RNU6-132P-201ENST00000383863 107 ntBASIC0.57□□□□□ -2.32
TDP1Q9NUW8 MIR617-201ENST00000385030 97 ntBASIC0.57□□□□□ -2.32
TDP1Q9NUW8 RNU7-74P-201ENST00000459104 62 ntBASIC0.57□□□□□ -2.32
TDP1Q9NUW8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.57□□□□□ -2.32
TDP1Q9NUW8 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
TDP1Q9NUW8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TDP1Q9NUW8 RNU6-811P-201ENST00000384069 107 ntBASIC0.56□□□□□ -2.32
TDP1Q9NUW8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.56□□□□□ -2.32
TDP1Q9NUW8 SNORA68.3-201ENST00000515906 83 ntBASIC0.56□□□□□ -2.32
TDP1Q9NUW8 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
TDP1Q9NUW8 MIR3064-201ENST00000581130 66 ntBASIC0.56□□□□□ -2.32
TDP1Q9NUW8 Y_RNA.239-201ENST00000364444 113 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 MIR519E-201ENST00000385075 84 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 MIR548U-201ENST00000390728 81 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 RNU2-59P-201ENST00000410482 191 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 RNU6-844P-201ENST00000517175 102 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 MIR4752-201ENST00000579672 72 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 AC104996.3-201ENST00000590718 94 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 AC010487.4-201ENST00000637027 61 ntBASIC0.55□□□□□ -2.32
TDP1Q9NUW8 RNU6-1298P-201ENST00000362456 101 ntBASIC0.54□□□□□ -2.32
TDP1Q9NUW8 RNU4-32P-201ENST00000363404 141 ntBASIC0.54□□□□□ -2.32
TDP1Q9NUW8 MIR193B-201ENST00000384907 83 ntBASIC0.54□□□□□ -2.32
TDP1Q9NUW8 RNU6-935P-201ENST00000410371 100 ntBASIC0.54□□□□□ -2.32
TDP1Q9NUW8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
TDP1Q9NUW8 MIR4668-201ENST00000582284 70 ntBASIC0.53□□□□□ -2.32
TDP1Q9NUW8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
TDP1Q9NUW8 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
TDP1Q9NUW8 SNORD44.1-201ENST00000363202 61 ntBASIC0.52□□□□□ -2.33
TDP1Q9NUW8 RNU6-509P-201ENST00000363519 107 ntBASIC0.52□□□□□ -2.33
TDP1Q9NUW8 SNORD116-22-201ENST00000384430 92 ntBASIC0.52□□□□□ -2.33
TDP1Q9NUW8 RNA5SP292-201ENST00000390974 118 ntBASIC0.52□□□□□ -2.33
TDP1Q9NUW8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TDP1Q9NUW8 MIR1273G-201ENST00000577677 100 ntBASIC0.52□□□□□ -2.33
TDP1Q9NUW8 MIR5582-201ENST00000579697 68 ntBASIC0.52□□□□□ -2.33
TDP1Q9NUW8 RNU1-29P-201ENST00000606574 126 ntBASIC0.52□□□□□ -2.33
TDP1Q9NUW8 MIRLET7D-201ENST00000362263 87 ntBASIC0.51□□□□□ -2.33
TDP1Q9NUW8 Y_RNA.491-201ENST00000384417 107 ntBASIC0.51□□□□□ -2.33
TDP1Q9NUW8 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
TDP1Q9NUW8 RNA5SP484-201ENST00000458857 111 ntBASIC0.51□□□□□ -2.33
TDP1Q9NUW8 RNA5SP170-201ENST00000517150 101 ntBASIC0.51□□□□□ -2.33
TDP1Q9NUW8 RNU6-1057P-201ENST00000517162 102 ntBASIC0.51□□□□□ -2.33
TDP1Q9NUW8 AC073869.9-201ENST00000641610 120 ntBASIC0.51□□□□□ -2.33
TDP1Q9NUW8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TDP1Q9NUW8 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
TDP1Q9NUW8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.5□□□□□ -2.33
TDP1Q9NUW8 RNU6-402P-201ENST00000410678 103 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms