Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNU6-1126P-201ENST00000384002 107 ntBASIC0.41□□□□□ -2.34
UPF2Q9HAU5 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
UPF2Q9HAU5 RNU6-243P-201ENST00000391140 107 ntBASIC0.41□□□□□ -2.34
UPF2Q9HAU5 RNU6-644P-201ENST00000391155 98 ntBASIC0.41□□□□□ -2.34
UPF2Q9HAU5 MTRNR2L2-201ENST00000604882 87 ntBASIC0.41□□□□□ -2.34
UPF2Q9HAU5 RNU6-1125P-201ENST00000363601 107 ntBASIC0.4□□□□□ -2.35
UPF2Q9HAU5 RNU6-480P-201ENST00000384332 107 ntBASIC0.4□□□□□ -2.35
UPF2Q9HAU5 RNU6-269P-201ENST00000391077 97 ntBASIC0.4□□□□□ -2.35
UPF2Q9HAU5 RNU7-61P-201ENST00000515897 61 ntBASIC0.4□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.818-201ENST00000618813 71 ntBASIC0.4□□□□□ -2.35
UPF2Q9HAU5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.4□□□□□ -2.35
UPF2Q9HAU5 MIR924-201ENST00000638017 53 ntBASIC0.4□□□□□ -2.35
UPF2Q9HAU5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.283-201ENST00000364798 112 ntBASIC0.39□□□□□ -2.35
UPF2Q9HAU5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.39□□□□□ -2.35
UPF2Q9HAU5 AL031737.1-201ENST00000450125 223 ntBASIC0.39□□□□□ -2.35
UPF2Q9HAU5 AC243829.6-201ENST00000612652 106 ntBASIC0.39□□□□□ -2.35
UPF2Q9HAU5 AC067863.3-201ENST00000624172 122 ntBASIC0.39□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.648-201ENST00000459455 110 ntBASIC0.38□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.93-201ENST00000363066 109 ntBASIC0.37□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.107-201ENST00000363190 121 ntBASIC0.37□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.348-201ENST00000365403 103 ntBASIC0.37□□□□□ -2.35
UPF2Q9HAU5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.37□□□□□ -2.35
UPF2Q9HAU5 SNORA70.25-201ENST00000612741 95 ntBASIC0.37□□□□□ -2.35
UPF2Q9HAU5 AP001318.4-201ENST00000616637 121 ntBASIC0.37□□□□□ -2.35
UPF2Q9HAU5 RNU6-640P-201ENST00000363693 105 ntBASIC0.36□□□□□ -2.35
UPF2Q9HAU5 SNORD58A-201ENST00000383875 65 ntBASIC0.36□□□□□ -2.35
UPF2Q9HAU5 MTATP8P2-201ENST00000435212 202 ntBASIC0.36□□□□□ -2.35
UPF2Q9HAU5 RNU7-13P-201ENST00000516413 62 ntBASIC0.36□□□□□ -2.35
UPF2Q9HAU5 RNU6-158P-201ENST00000517104 100 ntBASIC0.36□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 RNU6-1113P-201ENST00000384348 107 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 MIR519E-201ENST00000385075 84 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 RNU2-59P-201ENST00000410482 191 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 RNU6-887P-201ENST00000410660 100 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 AC093423.1-201ENST00000440817 142 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 RNU6-287P-201ENST00000516230 98 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.705-201ENST00000516862 110 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 MIR4696-201ENST00000581431 70 ntBASIC0.35□□□□□ -2.35
UPF2Q9HAU5 Y_RNA.207-201ENST00000364142 106 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 RNU6-153P-201ENST00000364422 104 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.290-201ENST00000364879 114 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 RNU6-905P-201ENST00000384434 107 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 RNA5SP484-201ENST00000458857 111 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 MIR2113-201ENST00000459007 91 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 SNORD4B-201ENST00000459083 72 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 RNU6-162P-201ENST00000516228 103 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 U7.3-201ENST00000616123 62 ntBASIC0.34□□□□□ -2.36
UPF2Q9HAU5 RNU6-132P-201ENST00000383863 107 ntBASIC0.33□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.544-201ENST00000384650 113 ntBASIC0.33□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.596-201ENST00000410462 109 ntBASIC0.33□□□□□ -2.36
UPF2Q9HAU5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.33□□□□□ -2.36
UPF2Q9HAU5 MIR8087-201ENST00000612745 78 ntBASIC0.33□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.30-201ENST00000362572 97 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.81-201ENST00000362997 102 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.190-201ENST00000363964 101 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 MIR488-201ENST00000365739 83 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 RNU6-815P-201ENST00000384080 113 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.495-201ENST00000384435 112 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 RNU6-972P-201ENST00000391208 107 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 RNU6-466P-201ENST00000391224 103 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 MIR548L-201ENST00000408303 86 ntBASIC0.32□□□□□ -2.36
UPF2Q9HAU5 MIRLET7F1-201ENST00000362202 87 ntBASIC0.31□□□□□ -2.36
UPF2Q9HAU5 RNU6-664P-201ENST00000362381 107 ntBASIC0.31□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.31□□□□□ -2.36
UPF2Q9HAU5 MIR617-201ENST00000385030 97 ntBASIC0.31□□□□□ -2.36
UPF2Q9HAU5 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
UPF2Q9HAU5 RNA5SP330-201ENST00000517096 96 ntBASIC0.31□□□□□ -2.36
UPF2Q9HAU5 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
UPF2Q9HAU5 SNORD115-44-201ENST00000365391 82 ntBASIC0.3□□□□□ -2.36
UPF2Q9HAU5 SNORA2A-201ENST00000383885 135 ntBASIC0.3□□□□□ -2.36
UPF2Q9HAU5 SNORD101-201ENST00000384027 73 ntBASIC0.3□□□□□ -2.36
UPF2Q9HAU5 MIR1197-201ENST00000408818 88 ntBASIC0.3□□□□□ -2.36
UPF2Q9HAU5 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
UPF2Q9HAU5 AC026421.1-201ENST00000519101 163 ntBASIC0.3□□□□□ -2.36
UPF2Q9HAU5 RNA5SP457-201ENST00000363657 124 ntBASIC0.29□□□□□ -2.36
UPF2Q9HAU5 Y_RNA.374-201ENST00000365606 101 ntBASIC0.29□□□□□ -2.36
UPF2Q9HAU5 RNU6-32P-201ENST00000383948 107 ntBASIC0.29□□□□□ -2.36
UPF2Q9HAU5 RNU6-13P-201ENST00000384248 107 ntBASIC0.29□□□□□ -2.36
UPF2Q9HAU5 RNU6-12P-201ENST00000384604 107 ntBASIC0.29□□□□□ -2.36
UPF2Q9HAU5 RNU6-41P-201ENST00000384741 107 ntBASIC0.29□□□□□ -2.36
UPF2Q9HAU5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
UPF2Q9HAU5 SNORD116-10-201ENST00000363791 102 ntBASIC0.28□□□□□ -2.36
UPF2Q9HAU5 RNU1-141P-201ENST00000364623 158 ntBASIC0.28□□□□□ -2.36
UPF2Q9HAU5 MIR501-201ENST00000390204 84 ntBASIC0.28□□□□□ -2.36
UPF2Q9HAU5 RNA5SP89-201ENST00000410300 108 ntBASIC0.28□□□□□ -2.36
UPF2Q9HAU5 HMGN2P22-201ENST00000427588 175 ntBASIC0.28□□□□□ -2.36
UPF2Q9HAU5 NAMPTP3-201ENST00000569273 224 ntBASIC0.28□□□□□ -2.36
UPF2Q9HAU5 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
UPF2Q9HAU5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.28□□□□□ -2.36
UPF2Q9HAU5 MIR330-201ENST00000362196 94 ntBASIC0.27□□□□□ -2.37
UPF2Q9HAU5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
UPF2Q9HAU5 RNA5SP292-201ENST00000390974 118 ntBASIC0.27□□□□□ -2.37
UPF2Q9HAU5 SNORD90-201ENST00000391145 111 ntBASIC0.27□□□□□ -2.37
UPF2Q9HAU5 AC069113.3-201ENST00000521019 150 ntBASIC0.27□□□□□ -2.37
UPF2Q9HAU5 MIR3064-201ENST00000581130 66 ntBASIC0.27□□□□□ -2.37
UPF2Q9HAU5 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms