Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNA5SP403-201ENST00000363598 108 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 Y_RNA.207-201ENST00000364142 106 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 RNY4P3-201ENST00000365254 95 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 SNORD115-44-201ENST00000365391 82 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 MIR200A-201ENST00000384875 90 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 SNORD89-201ENST00000390981 114 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 AC002350.1-201ENST00000490759 375 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 U7.4-201ENST00000614961 63 ntBASIC1.3□□□□□ -2.2
FOXP3Q9BZS1 SNORD105-201ENST00000386910 85 ntBASIC1.29□□□□□ -2.2
FOXP3Q9BZS1 RNU6-135P-201ENST00000516769 101 ntBASIC1.29□□□□□ -2.2
FOXP3Q9BZS1 MIR4452-201ENST00000583004 71 ntBASIC1.29□□□□□ -2.2
FOXP3Q9BZS1 SNORD115-24-201ENST00000363528 82 ntBASIC1.28□□□□□ -2.2
FOXP3Q9BZS1 MIR489-201ENST00000384923 84 ntBASIC1.28□□□□□ -2.2
FOXP3Q9BZS1 MIR889-201ENST00000401280 79 ntBASIC1.28□□□□□ -2.2
FOXP3Q9BZS1 snoU13.17-201ENST00000458802 104 ntBASIC1.28□□□□□ -2.2
FOXP3Q9BZS1 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
FOXP3Q9BZS1 RNU7-161P-201ENST00000517289 62 ntBASIC1.28□□□□□ -2.2
FOXP3Q9BZS1 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
FOXP3Q9BZS1 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
FOXP3Q9BZS1 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
FOXP3Q9BZS1 Y_RNA.532-201ENST00000384590 113 ntBASIC1.27□□□□□ -2.21
FOXP3Q9BZS1 MIR451A-201ENST00000385059 72 ntBASIC1.27□□□□□ -2.21
FOXP3Q9BZS1 RNU6-287P-201ENST00000516230 98 ntBASIC1.27□□□□□ -2.21
FOXP3Q9BZS1 RNU7-13P-201ENST00000516413 62 ntBASIC1.27□□□□□ -2.21
FOXP3Q9BZS1 MIR3140-201ENST00000583685 90 ntBASIC1.27□□□□□ -2.21
FOXP3Q9BZS1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.27□□□□□ -2.21
FOXP3Q9BZS1 RNU1-124P-201ENST00000363861 145 ntBASIC1.26□□□□□ -2.21
FOXP3Q9BZS1 RNA5SP117-201ENST00000365294 118 ntBASIC1.26□□□□□ -2.21
FOXP3Q9BZS1 SNORA40.6-201ENST00000391153 128 ntBASIC1.26□□□□□ -2.21
FOXP3Q9BZS1 snoU13.18-201ENST00000459483 104 ntBASIC1.26□□□□□ -2.21
FOXP3Q9BZS1 SNORD124-201ENST00000459577 104 ntBASIC1.26□□□□□ -2.21
FOXP3Q9BZS1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.26□□□□□ -2.21
FOXP3Q9BZS1 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.26□□□□□ -2.21
FOXP3Q9BZS1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 U3.27-201ENST00000391237 200 ntBASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 MIR942-201ENST00000401111 86 ntBASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 SCARNA18B-201ENST00000458806 135 ntBASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 RNU6-303P-201ENST00000517091 106 ntBASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 YWHAEP2-201ENST00000580066 112 ntBASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 YWHAEP3-201ENST00000582767 121 ntBASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 Y_RNA.788-201ENST00000622394 112 ntBASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 MIR1297-201ENST00000637311 77 ntBASIC1.25□□□□□ -2.21
FOXP3Q9BZS1 MIR96-201ENST00000362288 78 ntBASIC1.24□□□□□ -2.21
FOXP3Q9BZS1 SNORD114-27-201ENST00000363766 70 ntBASIC1.24□□□□□ -2.21
FOXP3Q9BZS1 SNORA24B-201ENST00000384176 131 ntBASIC1.24□□□□□ -2.21
FOXP3Q9BZS1 RNU6-807P-201ENST00000516805 107 ntBASIC1.24□□□□□ -2.21
FOXP3Q9BZS1 AL078603.1-201ENST00000603824 313 ntBASIC1.24□□□□□ -2.21
FOXP3Q9BZS1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.24□□□□□ -2.21
FOXP3Q9BZS1 Y_RNA.12-201ENST00000362393 112 ntBASIC1.23□□□□□ -2.21
FOXP3Q9BZS1 RNU6-1126P-201ENST00000384002 107 ntBASIC1.23□□□□□ -2.21
FOXP3Q9BZS1 MIR644A-201ENST00000385262 94 ntBASIC1.23□□□□□ -2.21
FOXP3Q9BZS1 AC074348.1-201ENST00000426503 132 ntBASIC1.23□□□□□ -2.21
FOXP3Q9BZS1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.23□□□□□ -2.21
FOXP3Q9BZS1 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
FOXP3Q9BZS1 RNU6-1057P-201ENST00000517162 102 ntBASIC1.23□□□□□ -2.21
FOXP3Q9BZS1 MIR3920-201ENST00000581751 86 ntBASIC1.23□□□□□ -2.21
FOXP3Q9BZS1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 MIR573-201ENST00000384964 99 ntBASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 MIR2113-201ENST00000459007 91 ntBASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 RNU7-104P-201ENST00000459398 79 ntBASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 MIR548AG2-201ENST00000581228 64 ntBASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 AC025627.3-201ENST00000582078 182 ntBASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 MIR4639-201ENST00000584938 69 ntBASIC1.22□□□□□ -2.21
FOXP3Q9BZS1 SNORD114-24-201ENST00000365029 72 ntBASIC1.21□□□□□ -2.22
FOXP3Q9BZS1 RNU6-469P-201ENST00000516253 101 ntBASIC1.21□□□□□ -2.22
FOXP3Q9BZS1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 Y_RNA.545-201ENST00000384652 105 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 SNORD28-201ENST00000384706 75 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 MIR216B-201ENST00000390186 82 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 RNU2-59P-201ENST00000410482 191 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 AC097510.1-201ENST00000510945 133 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 RNU6-719P-201ENST00000516671 104 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 MIR6734-201ENST00000621166 68 ntBASIC1.2□□□□□ -2.22
FOXP3Q9BZS1 RNU6-340P-201ENST00000364005 107 ntBASIC1.19□□□□□ -2.22
FOXP3Q9BZS1 Y_RNA.565-201ENST00000384719 101 ntBASIC1.19□□□□□ -2.22
FOXP3Q9BZS1 Y_RNA.606-201ENST00000410579 103 ntBASIC1.19□□□□□ -2.22
FOXP3Q9BZS1 RNA5SP255-201ENST00000516370 107 ntBASIC1.19□□□□□ -2.22
FOXP3Q9BZS1 MIR3134-201ENST00000579433 74 ntBASIC1.19□□□□□ -2.22
FOXP3Q9BZS1 MIR4484-201ENST00000582855 83 ntBASIC1.19□□□□□ -2.22
FOXP3Q9BZS1 AC244669.1-204ENST00000621564 178 ntBASIC1.19□□□□□ -2.22
FOXP3Q9BZS1 AC067863.3-201ENST00000624172 122 ntBASIC1.19□□□□□ -2.22
FOXP3Q9BZS1 SNORD18A-201ENST00000363753 72 ntBASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 RNU6-42P-201ENST00000384165 107 ntBASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 MIR617-201ENST00000385030 97 ntBASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 AC073261.1-201ENST00000429409 121 ntBASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 RNU6-523P-201ENST00000516304 54 ntBASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 MIR3612-201ENST00000579753 87 ntBASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 U6.81-201ENST00000612550 106 ntBASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
FOXP3Q9BZS1 Y_RNA.371-201ENST00000365591 113 ntBASIC1.17□□□□□ -2.22
FOXP3Q9BZS1 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
FOXP3Q9BZS1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 240.8 ms