Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MIR6516-201ENST00000630554 81 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 AC093010.3-201ENST00000570269 15214 ntBASIC0.78□□□□□ -2.29
KRTAP4-3Q9BYR4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.63-201ENST00000362841 102 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORD114-13-201ENST00000364377 74 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORA7.2-201ENST00000364446 145 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU4-52P-201ENST00000384209 138 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR581-201ENST00000384895 96 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR504-201ENST00000385065 83 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIRLET7B-201ENST00000385140 83 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR29C-201ENST00000385231 88 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORD41.1-201ENST00000391000 69 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR548AJ2-201ENST00000408539 92 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORD88.1-201ENST00000408684 91 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP95-201ENST00000410319 137 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 snoU13.21-201ENST00000459368 105 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 snoU13.15-201ENST00000459407 104 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 RN7SL274P-201ENST00000492268 272 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU7-193P-201ENST00000516723 65 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.698-201ENST00000516798 118 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORA48.11-201ENST00000517015 89 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-1238P-201ENST00000517215 102 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR548AE1-201ENST00000583292 70 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR3192-201ENST00000584920 77 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 AL353803.5-201ENST00000599815 141 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR6773-201ENST00000612812 74 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.783-201ENST00000613546 102 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
KRTAP4-3Q9BYR4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-23P-201ENST00000363283 107 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.223-201ENST00000364290 113 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP189-201ENST00000364920 115 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-939P-201ENST00000384634 107 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 AC092427.1-202ENST00000430569 476 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 HMGN2P3-201ENST00000433603 273 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 HMGN2P5-201ENST00000436882 273 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 AC003989.2-201ENST00000440224 169 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.652-201ENST00000458902 102 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORA70.14-201ENST00000516205 110 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORA31.14-201ENST00000516728 116 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-1121P-201ENST00000516802 109 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP380-201ENST00000517190 98 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP47-201ENST00000517230 109 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4648-201ENST00000580107 72 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4802-201ENST00000581881 80 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP108-201ENST00000605921 117 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR6873-201ENST00000622788 63 ntBASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR379-201ENST00000362218 67 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORD115-33-201ENST00000363723 82 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-737P-201ENST00000365370 107 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 RNY4P10-201ENST00000365571 96 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORD21-201ENST00000383953 95 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-1083P-201ENST00000384022 107 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU1-138P-201ENST00000384093 164 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-198P-201ENST00000384258 104 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.511-201ENST00000384514 103 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.566-201ENST00000384735 101 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR653-201ENST00000385279 96 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-482P-201ENST00000391068 107 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP425-201ENST00000410336 112 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORD83.1-201ENST00000411362 77 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.657-201ENST00000515983 102 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.663-201ENST00000516043 101 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 AC120024.2-201ENST00000576526 175 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4709-201ENST00000577272 72 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR6766-201ENST00000622641 72 ntBASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC0.75□□□□□ -2.29
KRTAP4-3Q9BYR4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms