Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 SNORD38.1-201ENST00000363863 68 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.190-201ENST00000363964 101 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU6-726P-201ENST00000364680 107 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.309-201ENST00000365046 111 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.342-201ENST00000365352 113 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU6-1056P-201ENST00000383996 107 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 MIR635-201ENST00000384830 98 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 SNORD90-201ENST00000391145 111 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU7-85P-201ENST00000458851 63 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.809-201ENST00000516058 95 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU6-1018P-201ENST00000516577 106 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 MIR4694-201ENST00000578534 80 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 MIR3920-201ENST00000581751 86 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 RNU6-90P-201ENST00000606352 106 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 AC103810.7-201ENST00000607821 91 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 AC092634.7-201ENST00000621022 103 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 MIR6828-201ENST00000636181 60 ntBASIC0.22□□□□□ -2.37
CDX2Q99626 Y_RNA.57-201ENST00000362806 113 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 Y_RNA.377-201ENST00000365644 108 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 MIR518A1-201ENST00000385068 85 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 RNU6-269P-201ENST00000391077 97 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.21□□□□□ -2.38
CDX2Q99626 RNU7-61P-201ENST00000515897 61 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 RNU6-75P-201ENST00000515944 104 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 SCARNA16.5-201ENST00000517114 183 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 AL513043.2-201ENST00000573941 143 ntBASIC0.21□□□□□ -2.38
CDX2Q99626 Y_RNA.95-201ENST00000363079 95 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 Y_RNA.273-201ENST00000364703 102 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 MIR488-201ENST00000365739 83 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNU6-132P-201ENST00000383863 107 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNU6-147P-201ENST00000383983 107 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 Y_RNA.423-201ENST00000384057 113 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 SNORA51.5-201ENST00000384126 131 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNU6-571P-201ENST00000384128 107 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.2□□□□□ -2.38
CDX2Q99626 AL035461.1-201ENST00000421490 332 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNA5SP227-201ENST00000516184 113 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 RNU6-1265P-201ENST00000516342 103 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 AC138869.1-201ENST00000568623 124 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 MIR548H5-201ENST00000580314 60 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 AP001180.6-201ENST00000584918 159 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 MTRNR2L2-201ENST00000604882 87 ntBASIC0.2□□□□□ -2.38
CDX2Q99626 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.2□□□□□ -2.38
CDX2Q99626 MIRLET7F1-201ENST00000362202 87 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNU6-1260P-201ENST00000362944 107 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 Y_RNA.78-201ENST00000362970 110 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 Y_RNA.174-201ENST00000363781 105 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNU6-756P-201ENST00000383997 107 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNY1P7-201ENST00000384743 110 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR604-201ENST00000384880 94 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR519A1-201ENST00000385257 85 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 Y_RNA.629-201ENST00000411368 105 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 RNA5SP484-201ENST00000458857 111 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 AC026421.1-201ENST00000519101 163 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR4639-201ENST00000584938 69 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 TRDV1-202ENST00000621643 102 ntBASIC0.19□□□□□ -2.38
CDX2Q99626 SNORD114-31-201ENST00000363219 75 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 RNU6-640P-201ENST00000363693 105 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 Y_RNA.290-201ENST00000364879 114 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 Y_RNA.348-201ENST00000365403 103 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 RNU6-1254P-201ENST00000391266 104 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 Y_RNA.601-201ENST00000410500 113 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 SNORA40.8-201ENST00000411034 126 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 AC097635.1-201ENST00000450678 155 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 SCARNA23-201ENST00000516060 130 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 RNU6-287P-201ENST00000516230 98 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 AC108676.2-201ENST00000605225 163 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 AL162376.1-201ENST00000624117 175 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 MIR499B-201ENST00000636498 73 ntBASIC0.18□□□□□ -2.38
CDX2Q99626 Y_RNA.207-201ENST00000364142 106 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-755P-201ENST00000364400 103 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 Y_RNA.283-201ENST00000364798 112 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-905P-201ENST00000384434 107 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-813P-201ENST00000384691 107 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 MIR519E-201ENST00000385075 84 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNA5SP292-201ENST00000390974 118 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 SNORD41.1-201ENST00000391000 69 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-1052P-201ENST00000411398 104 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-469P-201ENST00000516253 101 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-719P-201ENST00000516671 104 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-919P-201ENST00000516731 104 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 MIR4696-201ENST00000581431 70 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 U7.3-201ENST00000616123 62 ntBASIC0.17□□□□□ -2.38
CDX2Q99626 RNU6-834P-201ENST00000362367 110 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-766P-201ENST00000362478 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 SNORD95.1-201ENST00000364099 68 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-1229P-201ENST00000364295 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 SNORD115-27-201ENST00000364430 82 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 SNORD58A-201ENST00000383875 65 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-1126P-201ENST00000384002 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-1081P-201ENST00000384537 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 RNU6-243P-201ENST00000391140 107 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 MIR1302-5-201ENST00000408164 150 ntBASIC0.16□□□□□ -2.38
CDX2Q99626 HMGN2P22-201ENST00000427588 175 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 280.7 ms