Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNORD115-24-201ENST00000363528 82 ntBASIC2.06□□□□□ -2.08
PHOX2BQ99453 RNU6-663P-201ENST00000391105 106 ntBASIC2.06□□□□□ -2.08
PHOX2BQ99453 RNU6-1052P-201ENST00000411398 104 ntBASIC2.06□□□□□ -2.08
PHOX2BQ99453 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
PHOX2BQ99453 RNU6-719P-201ENST00000516671 104 ntBASIC2.06□□□□□ -2.08
PHOX2BQ99453 U6.111-201ENST00000636093 83 ntBASIC2.06□□□□□ -2.08
PHOX2BQ99453 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PHOX2BQ99453 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PHOX2BQ99453 RNU6-330P-201ENST00000363015 107 ntBASIC2.05□□□□□ -2.08
PHOX2BQ99453 RNU6-824P-201ENST00000363724 104 ntBASIC2.05□□□□□ -2.08
PHOX2BQ99453 RNU6-895P-201ENST00000384125 103 ntBASIC2.05□□□□□ -2.08
PHOX2BQ99453 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
PHOX2BQ99453 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
PHOX2BQ99453 Y_RNA.30-201ENST00000362572 97 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 RNA5SP403-201ENST00000363598 108 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 SNORA31.14-201ENST00000516728 116 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 AL157834.3-201ENST00000615543 103 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 MIR6515-201ENST00000619843 57 ntBASIC2.04□□□□□ -2.08
PHOX2BQ99453 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.04□□□□□ -2.08
PHOX2BQ99453 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PHOX2BQ99453 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
PHOX2BQ99453 RNU6-392P-201ENST00000364926 101 ntBASIC2.03□□□□□ -2.08
PHOX2BQ99453 RNU6-800P-201ENST00000384473 103 ntBASIC2.03□□□□□ -2.08
PHOX2BQ99453 RNA5SP338-201ENST00000410495 85 ntBASIC2.03□□□□□ -2.08
PHOX2BQ99453 RNU7-74P-201ENST00000459104 62 ntBASIC2.03□□□□□ -2.08
PHOX2BQ99453 AC022709.1-201ENST00000615967 87 ntBASIC2.03□□□□□ -2.08
PHOX2BQ99453 Y_RNA.32-201ENST00000362589 110 ntBASIC2.02□□□□□ -2.09
PHOX2BQ99453 SNORD114-22-201ENST00000365423 72 ntBASIC2.02□□□□□ -2.09
PHOX2BQ99453 MIR2113-201ENST00000459007 91 ntBASIC2.02□□□□□ -2.09
PHOX2BQ99453 RNA5SP102-201ENST00000516865 106 ntBASIC2.02□□□□□ -2.09
PHOX2BQ99453 RNA5SP117-201ENST00000365294 118 ntBASIC2.01□□□□□ -2.09
PHOX2BQ99453 MIR222-201ENST00000384992 110 ntBASIC2.01□□□□□ -2.09
PHOX2BQ99453 MIR617-201ENST00000385030 97 ntBASIC2.01□□□□□ -2.09
PHOX2BQ99453 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
PHOX2BQ99453 SNORD45.1-201ENST00000363181 77 ntBASIC2□□□□□ -2.09
PHOX2BQ99453 RNU6-1126P-201ENST00000384002 107 ntBASIC2□□□□□ -2.09
PHOX2BQ99453 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
PHOX2BQ99453 AC067863.3-201ENST00000624172 122 ntBASIC2□□□□□ -2.09
PHOX2BQ99453 MIR4773-1-201ENST00000637203 78 ntBASIC2□□□□□ -2.09
PHOX2BQ99453 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
PHOX2BQ99453 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PHOX2BQ99453 SNORD115-31-201ENST00000365318 82 ntBASIC1.99□□□□□ -2.09
PHOX2BQ99453 FABP5P4-201ENST00000437203 171 ntBASIC1.99□□□□□ -2.09
PHOX2BQ99453 AC093423.1-201ENST00000440817 142 ntBASIC1.99□□□□□ -2.09
PHOX2BQ99453 RNU7-24P-201ENST00000458867 62 ntBASIC1.99□□□□□ -2.09
PHOX2BQ99453 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.99□□□□□ -2.09
PHOX2BQ99453 RNU6-469P-201ENST00000516253 101 ntBASIC1.98□□□□□ -2.09
PHOX2BQ99453 RNU6-1110P-201ENST00000516462 101 ntBASIC1.98□□□□□ -2.09
PHOX2BQ99453 MIR3920-201ENST00000581751 86 ntBASIC1.98□□□□□ -2.09
PHOX2BQ99453 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
PHOX2BQ99453 AC084768.2-201ENST00000622736 221 ntBASIC1.98□□□□□ -2.09
PHOX2BQ99453 RNU6-471P-201ENST00000383944 106 ntBASIC1.97□□□□□ -2.09
PHOX2BQ99453 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
PHOX2BQ99453 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
PHOX2BQ99453 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
PHOX2BQ99453 RNU6-382P-201ENST00000365181 106 ntBASIC1.96□□□□□ -2.1
PHOX2BQ99453 Y_RNA.386-201ENST00000383913 105 ntBASIC1.96□□□□□ -2.1
PHOX2BQ99453 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.96□□□□□ -2.1
PHOX2BQ99453 SNORD75.2-201ENST00000408784 58 ntBASIC1.96□□□□□ -2.1
PHOX2BQ99453 AC244098.3-201ENST00000424803 96 ntBASIC1.96□□□□□ -2.1
PHOX2BQ99453 AC002429.1-201ENST00000437672 148 ntBASIC1.96□□□□□ -2.1
PHOX2BQ99453 RNU7-161P-201ENST00000517289 62 ntBASIC1.96□□□□□ -2.1
PHOX2BQ99453 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PHOX2BQ99453 SNORA25-201ENST00000384384 134 ntBASIC1.95□□□□□ -2.1
PHOX2BQ99453 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PHOX2BQ99453 RNU1-123P-201ENST00000458950 160 ntBASIC1.95□□□□□ -2.1
PHOX2BQ99453 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.95□□□□□ -2.1
PHOX2BQ99453 AC002350.1-201ENST00000490759 375 ntBASIC1.95□□□□□ -2.1
PHOX2BQ99453 RNU6-881P-201ENST00000516813 102 ntBASIC1.95□□□□□ -2.1
PHOX2BQ99453 MIR4639-201ENST00000584938 69 ntBASIC1.95□□□□□ -2.1
PHOX2BQ99453 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PHOX2BQ99453 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
PHOX2BQ99453 MIR1265-201ENST00000408444 86 ntBASIC1.94□□□□□ -2.1
PHOX2BQ99453 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.94□□□□□ -2.1
PHOX2BQ99453 AL691482.2-201ENST00000457453 84 ntBASIC1.94□□□□□ -2.1
PHOX2BQ99453 U7.7-201ENST00000459276 60 ntBASIC1.94□□□□□ -2.1
PHOX2BQ99453 RNU7-104P-201ENST00000459398 79 ntBASIC1.94□□□□□ -2.1
PHOX2BQ99453 MIR4285-201ENST00000581001 85 ntBASIC1.94□□□□□ -2.1
PHOX2BQ99453 RNU6-1216P-201ENST00000362590 107 ntBASIC1.93□□□□□ -2.1
PHOX2BQ99453 MIR9-3-201ENST00000385084 90 ntBASIC1.93□□□□□ -2.1
PHOX2BQ99453 SNORA67.5-201ENST00000391036 107 ntBASIC1.93□□□□□ -2.1
PHOX2BQ99453 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.93□□□□□ -2.1
PHOX2BQ99453 SNORA25.4-201ENST00000363666 124 ntBASIC1.91□□□□□ -2.1
PHOX2BQ99453 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PHOX2BQ99453 RNU6-495P-201ENST00000362995 107 ntBASIC1.9□□□□□ -2.11
PHOX2BQ99453 SNORD45A-201ENST00000384512 84 ntBASIC1.9□□□□□ -2.11
PHOX2BQ99453 RNU6-630P-201ENST00000391258 106 ntBASIC1.9□□□□□ -2.11
PHOX2BQ99453 MIR548AG2-201ENST00000581228 64 ntBASIC1.9□□□□□ -2.11
PHOX2BQ99453 MIR548O2-201ENST00000616090 70 ntBASIC1.9□□□□□ -2.11
PHOX2BQ99453 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
PHOX2BQ99453 SNORD115-22-201ENST00000364456 82 ntBASIC1.89□□□□□ -2.11
PHOX2BQ99453 MIR200A-201ENST00000384875 90 ntBASIC1.89□□□□□ -2.11
PHOX2BQ99453 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
PHOX2BQ99453 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
PHOX2BQ99453 Y_RNA.443-201ENST00000384135 111 ntBASIC1.88□□□□□ -2.11
PHOX2BQ99453 MIR598-201ENST00000384868 97 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 273.9 ms