Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 MIR450A2-201ENST00000385022 100 ntBASIC0.83□□□□□ -2.28
PNKPQ96T60 RNA5SP480-201ENST00000516840 109 ntBASIC0.83□□□□□ -2.28
PNKPQ96T60 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.83□□□□□ -2.28
PNKPQ96T60 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.83□□□□□ -2.28
PNKPQ96T60 IGLL4P-201ENST00000614590 133 ntBASIC0.83□□□□□ -2.28
PNKPQ96T60 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PNKPQ96T60 RNU6-633P-201ENST00000362612 103 ntBASIC0.82□□□□□ -2.28
PNKPQ96T60 Y_RNA.73-201ENST00000362910 113 ntBASIC0.82□□□□□ -2.28
PNKPQ96T60 RNU6-1229P-201ENST00000364295 107 ntBASIC0.82□□□□□ -2.28
PNKPQ96T60 SNORA36.2-201ENST00000384004 127 ntBASIC0.82□□□□□ -2.28
PNKPQ96T60 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.82□□□□□ -2.28
PNKPQ96T60 RNA5SP47-201ENST00000517230 109 ntBASIC0.82□□□□□ -2.28
PNKPQ96T60 AC062037.1-201ENST00000605302 128 ntBASIC0.82□□□□□ -2.28
PNKPQ96T60 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
PNKPQ96T60 RNU6-811P-201ENST00000384069 107 ntBASIC0.81□□□□□ -2.28
PNKPQ96T60 RNA5SP292-201ENST00000390974 118 ntBASIC0.81□□□□□ -2.28
PNKPQ96T60 Y_RNA.596-201ENST00000410462 109 ntBASIC0.81□□□□□ -2.28
PNKPQ96T60 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.81□□□□□ -2.28
PNKPQ96T60 MIR4696-201ENST00000581431 70 ntBASIC0.81□□□□□ -2.28
PNKPQ96T60 RNU6-664P-201ENST00000362381 107 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 RNU6-509P-201ENST00000363519 107 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 SNORD101-201ENST00000384027 73 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 RNU7-13P-201ENST00000516413 62 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 RNU7-153P-201ENST00000516455 62 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 MIR3064-201ENST00000581130 66 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 AC067863.3-201ENST00000624172 122 ntBASIC0.8□□□□□ -2.28
PNKPQ96T60 SNORA36.1-201ENST00000363424 132 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 RNU4-45P-201ENST00000365469 141 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 MIR7-2-201ENST00000384970 110 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 MIR519C-201ENST00000385053 87 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 Y_RNA.611-201ENST00000410682 108 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 RNA5SP94-201ENST00000516917 108 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 MIR3920-201ENST00000581751 86 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 AC104996.3-201ENST00000590718 94 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 MTRNR2L2-201ENST00000604882 87 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.79□□□□□ -2.28
PNKPQ96T60 MIR548BB-201ENST00000626714 66 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
PNKPQ96T60 SNORD114-26-201ENST00000363543 72 ntBASIC0.78□□□□□ -2.28
PNKPQ96T60 RNU6-497P-201ENST00000365316 104 ntBASIC0.78□□□□□ -2.28
PNKPQ96T60 RNU6-716P-201ENST00000365621 103 ntBASIC0.78□□□□□ -2.28
PNKPQ96T60 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PNKPQ96T60 MIR1236-201ENST00000408340 102 ntBASIC0.78□□□□□ -2.28
PNKPQ96T60 RNY4P29-201ENST00000410801 97 ntBASIC0.78□□□□□ -2.28
PNKPQ96T60 RNU6-287P-201ENST00000516230 98 ntBASIC0.78□□□□□ -2.28
PNKPQ96T60 SCARNA16.5-201ENST00000517114 183 ntBASIC0.78□□□□□ -2.28
PNKPQ96T60 Y_RNA.36-201ENST00000362602 112 ntBASIC0.77□□□□□ -2.29
PNKPQ96T60 Y_RNA.207-201ENST00000364142 106 ntBASIC0.77□□□□□ -2.29
PNKPQ96T60 Y_RNA.239-201ENST00000364444 113 ntBASIC0.77□□□□□ -2.29
PNKPQ96T60 Y_RNA.388-201ENST00000383919 113 ntBASIC0.77□□□□□ -2.29
PNKPQ96T60 SNORA26.2-201ENST00000390922 122 ntBASIC0.77□□□□□ -2.29
PNKPQ96T60 MIR548L-201ENST00000408303 86 ntBASIC0.77□□□□□ -2.29
PNKPQ96T60 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.77□□□□□ -2.29
PNKPQ96T60 RN7SKP12-201ENST00000516275 143 ntBASIC0.77□□□□□ -2.29
PNKPQ96T60 SNORA18.5-201ENST00000516616 101 ntBASIC0.77□□□□□ -2.29
PNKPQ96T60 RNU6-820P-201ENST00000384273 107 ntBASIC0.76□□□□□ -2.29
PNKPQ96T60 Y_RNA.491-201ENST00000384417 107 ntBASIC0.76□□□□□ -2.29
PNKPQ96T60 MIR548U-201ENST00000390728 81 ntBASIC0.76□□□□□ -2.29
PNKPQ96T60 AC022137.1-201ENST00000483735 151 ntBASIC0.76□□□□□ -2.29
PNKPQ96T60 MIR548AG2-201ENST00000581228 64 ntBASIC0.76□□□□□ -2.29
PNKPQ96T60 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.76□□□□□ -2.29
PNKPQ96T60 RNU6-726P-201ENST00000364680 107 ntBASIC0.75□□□□□ -2.29
PNKPQ96T60 SNORD115-44-201ENST00000365391 82 ntBASIC0.75□□□□□ -2.29
PNKPQ96T60 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
PNKPQ96T60 MIR140-201ENST00000385282 100 ntBASIC0.75□□□□□ -2.29
PNKPQ96T60 MIR6828-201ENST00000636181 60 ntBASIC0.75□□□□□ -2.29
PNKPQ96T60 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PNKPQ96T60 RNU6-1126P-201ENST00000384002 107 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
PNKPQ96T60 MIR2113-201ENST00000459007 91 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 RNA5SP227-201ENST00000516184 113 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 RNA5SP268-201ENST00000516828 124 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 MIR4796-201ENST00000580742 81 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 MIR5588-201ENST00000581890 63 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.74□□□□□ -2.29
PNKPQ96T60 RNA5SP517-201ENST00000364724 117 ntBASIC0.73□□□□□ -2.29
PNKPQ96T60 RNU6-110P-201ENST00000384508 104 ntBASIC0.73□□□□□ -2.29
PNKPQ96T60 SNORD41.1-201ENST00000391000 69 ntBASIC0.73□□□□□ -2.29
PNKPQ96T60 SNORD90-201ENST00000391145 111 ntBASIC0.73□□□□□ -2.29
PNKPQ96T60 MIR1302-4-201ENST00000408701 150 ntBASIC0.73□□□□□ -2.29
PNKPQ96T60 RNU6-592P-201ENST00000411333 103 ntBASIC0.73□□□□□ -2.29
PNKPQ96T60 RNU6-979P-201ENST00000383896 107 ntBASIC0.72□□□□□ -2.29
PNKPQ96T60 RNU6-935P-201ENST00000410371 100 ntBASIC0.72□□□□□ -2.29
PNKPQ96T60 AC093729.1-201ENST00000513074 128 ntBASIC0.72□□□□□ -2.29
PNKPQ96T60 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.72□□□□□ -2.29
PNKPQ96T60 MIR6513-201ENST00000621188 64 ntBASIC0.72□□□□□ -2.29
PNKPQ96T60 AC006160.2-201ENST00000637708 154 ntBASIC0.72□□□□□ -2.29
PNKPQ96T60 SNORD115-37-201ENST00000363768 82 ntBASIC0.71□□□□□ -2.3
PNKPQ96T60 SNORA8.2-201ENST00000384372 139 ntBASIC0.71□□□□□ -2.3
PNKPQ96T60 MIR216A-201ENST00000385063 110 ntBASIC0.71□□□□□ -2.3
PNKPQ96T60 SNORA25.13-201ENST00000516395 103 ntBASIC0.71□□□□□ -2.3
PNKPQ96T60 RN7SL793P-201ENST00000583259 296 ntBASIC0.71□□□□□ -2.3
PNKPQ96T60 MIR7107-201ENST00000611489 80 ntBASIC0.71□□□□□ -2.3
PNKPQ96T60 AC092634.7-201ENST00000621022 103 ntBASIC0.71□□□□□ -2.3
PNKPQ96T60 RNA5SP173-201ENST00000364857 136 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms