Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-219P-201ENST00000364728 107 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 RNU6-287P-201ENST00000516230 98 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 SNORA70.25-201ENST00000612741 95 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 MIR6788-201ENST00000618842 66 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 AC067863.3-201ENST00000624172 122 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
ZIM3Q96PE6 MIRLET7F1-201ENST00000362202 87 ntBASIC0.32□□□□□ -2.36
ZIM3Q96PE6 RNU6-664P-201ENST00000362381 107 ntBASIC0.32□□□□□ -2.36
ZIM3Q96PE6 Y_RNA.191-201ENST00000363972 113 ntBASIC0.32□□□□□ -2.36
ZIM3Q96PE6 RNA5SP292-201ENST00000390974 118 ntBASIC0.32□□□□□ -2.36
ZIM3Q96PE6 RNA5SP227-201ENST00000516184 113 ntBASIC0.32□□□□□ -2.36
ZIM3Q96PE6 MIR3064-201ENST00000581130 66 ntBASIC0.32□□□□□ -2.36
ZIM3Q96PE6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.32□□□□□ -2.36
ZIM3Q96PE6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.31□□□□□ -2.36
ZIM3Q96PE6 RNU6-1131P-201ENST00000364955 107 ntBASIC0.31□□□□□ -2.36
ZIM3Q96PE6 MIR518E-201ENST00000385252 88 ntBASIC0.31□□□□□ -2.36
ZIM3Q96PE6 Y_RNA.596-201ENST00000410462 109 ntBASIC0.31□□□□□ -2.36
ZIM3Q96PE6 MIR2113-201ENST00000459007 91 ntBASIC0.31□□□□□ -2.36
ZIM3Q96PE6 RNU7-13P-201ENST00000516413 62 ntBASIC0.31□□□□□ -2.36
ZIM3Q96PE6 MIR5000-201ENST00000577717 103 ntBASIC0.31□□□□□ -2.36
ZIM3Q96PE6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.31□□□□□ -2.36
ZIM3Q96PE6 SNORD101-201ENST00000384027 73 ntBASIC0.3□□□□□ -2.36
ZIM3Q96PE6 SNORA24B-201ENST00000384176 131 ntBASIC0.3□□□□□ -2.36
ZIM3Q96PE6 MIR617-201ENST00000385030 97 ntBASIC0.3□□□□□ -2.36
ZIM3Q96PE6 RNU6-466P-201ENST00000391224 103 ntBASIC0.3□□□□□ -2.36
ZIM3Q96PE6 Y_RNA.609-201ENST00000410669 89 ntBASIC0.3□□□□□ -2.36
ZIM3Q96PE6 RNA5SP484-201ENST00000458857 111 ntBASIC0.3□□□□□ -2.36
ZIM3Q96PE6 RNU6-267P-201ENST00000516714 103 ntBASIC0.3□□□□□ -2.36
ZIM3Q96PE6 MIR4452-201ENST00000583004 71 ntBASIC0.3□□□□□ -2.36
ZIM3Q96PE6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.3□□□□□ -2.36
ZIM3Q96PE6 SNORD115-44-201ENST00000365391 82 ntBASIC0.29□□□□□ -2.36
ZIM3Q96PE6 SNORA2A-201ENST00000383885 135 ntBASIC0.29□□□□□ -2.36
ZIM3Q96PE6 Y_RNA.593-201ENST00000410292 98 ntBASIC0.29□□□□□ -2.36
ZIM3Q96PE6 Y_RNA.620-201ENST00000411009 88 ntBASIC0.29□□□□□ -2.36
ZIM3Q96PE6 AC104996.3-201ENST00000590718 94 ntBASIC0.29□□□□□ -2.36
ZIM3Q96PE6 MIR2052-201ENST00000636055 55 ntBASIC0.29□□□□□ -2.36
ZIM3Q96PE6 RNU1-141P-201ENST00000364623 158 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 SNORA25.9-201ENST00000365087 128 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 RNU6-675P-201ENST00000384236 104 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 RNU2-59P-201ENST00000410482 191 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 RNU6-519P-201ENST00000410590 108 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 HMGN2P22-201ENST00000427588 175 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 RNU6-844P-201ENST00000517175 102 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 MIR4536-1-201ENST00000583537 88 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 MIR5087-201ENST00000635826 76 ntBASIC0.28□□□□□ -2.36
ZIM3Q96PE6 Y_RNA.96-201ENST00000363092 109 ntBASIC0.27□□□□□ -2.37
ZIM3Q96PE6 MIR501-201ENST00000390204 84 ntBASIC0.27□□□□□ -2.37
ZIM3Q96PE6 RNU7-153P-201ENST00000516455 62 ntBASIC0.27□□□□□ -2.37
ZIM3Q96PE6 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
ZIM3Q96PE6 MIR5582-201ENST00000579697 68 ntBASIC0.27□□□□□ -2.37
ZIM3Q96PE6 MIR4668-201ENST00000582284 70 ntBASIC0.27□□□□□ -2.37
ZIM3Q96PE6 MIR151B-201ENST00000584249 96 ntBASIC0.27□□□□□ -2.37
ZIM3Q96PE6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.27□□□□□ -2.37
ZIM3Q96PE6 RNU6-811P-201ENST00000384069 107 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 RNU6-815P-201ENST00000384080 113 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 MIR548H2-201ENST00000408874 88 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 RNU6-935P-201ENST00000410371 100 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 RNU6-402P-201ENST00000410678 103 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 MIR3124-201ENST00000582636 67 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 MIR3140-201ENST00000583685 90 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.26□□□□□ -2.37
ZIM3Q96PE6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.25□□□□□ -2.37
ZIM3Q96PE6 RNU6-633P-201ENST00000362612 103 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.258-201ENST00000364613 105 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 RNY1P4-201ENST00000384595 115 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 MT-TY-201ENST00000387409 66 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
ZIM3Q96PE6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
ZIM3Q96PE6 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 RNU6-65P-201ENST00000516332 98 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 SNORA18.5-201ENST00000516616 101 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.694-201ENST00000516677 117 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 NAMPTP3-201ENST00000569273 224 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 MIR548O2-201ENST00000616090 70 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 MIR6513-201ENST00000621188 64 ntBASIC0.25□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.17-201ENST00000362433 111 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 RNU6-161P-201ENST00000363051 106 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.164-201ENST00000363709 102 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.491-201ENST00000384417 107 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 MIR451A-201ENST00000385059 72 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 RNY4P30-201ENST00000410216 95 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 MIR548AE1-201ENST00000583292 70 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 AC243829.3-201ENST00000622177 108 ntBASIC0.24□□□□□ -2.37
ZIM3Q96PE6 RNU4-32P-201ENST00000363404 141 ntBASIC0.23□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.369-201ENST00000365568 117 ntBASIC0.23□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.508-201ENST00000384502 114 ntBASIC0.23□□□□□ -2.37
ZIM3Q96PE6 Y_RNA.558-201ENST00000384685 113 ntBASIC0.23□□□□□ -2.37
ZIM3Q96PE6 MIR548L-201ENST00000408303 86 ntBASIC0.23□□□□□ -2.37
ZIM3Q96PE6 RNA5SP193-201ENST00000410353 107 ntBASIC0.23□□□□□ -2.37
ZIM3Q96PE6 snoU13.17-201ENST00000458802 104 ntBASIC0.23□□□□□ -2.37
ZIM3Q96PE6 RNU6-848P-201ENST00000515948 107 ntBASIC0.23□□□□□ -2.37
ZIM3Q96PE6 RNU6-617P-201ENST00000516147 107 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms