Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
FOXN4Q96NZ1 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 RNU6-716P-201ENST00000365621 103 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 RNA5SP94-201ENST00000516917 108 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 RNA5SP47-201ENST00000517230 109 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 MIR4536-1-201ENST00000583537 88 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 MIR4639-201ENST00000584938 69 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 U6.100-201ENST00000636230 99 ntBASIC0.49□□□□□ -2.33
FOXN4Q96NZ1 SNORA36.1-201ENST00000363424 132 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 RNA5SP403-201ENST00000363598 108 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 SNORD4B-201ENST00000459083 72 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 RNU6-75P-201ENST00000515944 104 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 RNU6-65P-201ENST00000516332 98 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 RNU6-135P-201ENST00000516769 101 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 RNU6-844P-201ENST00000517175 102 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
FOXN4Q96NZ1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 MIRLET7F1-201ENST00000362202 87 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 RNU4-32P-201ENST00000363404 141 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 RNU6-1134P-201ENST00000365156 101 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 MIR548L-201ENST00000408303 86 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 AC067863.3-201ENST00000624172 122 ntBASIC0.47□□□□□ -2.33
FOXN4Q96NZ1 RNU6-1255P-201ENST00000363434 112 ntBASIC0.46□□□□□ -2.34
FOXN4Q96NZ1 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
FOXN4Q96NZ1 RNA5SP227-201ENST00000516184 113 ntBASIC0.46□□□□□ -2.34
FOXN4Q96NZ1 RNU6-1265P-201ENST00000516342 103 ntBASIC0.46□□□□□ -2.34
FOXN4Q96NZ1 RNU7-13P-201ENST00000516413 62 ntBASIC0.46□□□□□ -2.34
FOXN4Q96NZ1 RNA5SP268-201ENST00000516828 124 ntBASIC0.46□□□□□ -2.34
FOXN4Q96NZ1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.46□□□□□ -2.34
FOXN4Q96NZ1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.46□□□□□ -2.34
FOXN4Q96NZ1 RNU6-294P-201ENST00000364999 102 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 Y_RNA.369-201ENST00000365568 117 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 RNU6-132P-201ENST00000383863 107 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 SNORD116-22-201ENST00000384430 92 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 Y_RNA.596-201ENST00000410462 109 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 RNU6-402P-201ENST00000410678 103 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 RNU6-267P-201ENST00000516714 103 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 MIR1273G-201ENST00000577677 100 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 MIR3920-201ENST00000581751 86 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 MIR4668-201ENST00000582284 70 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 SNORA25.18-201ENST00000607153 114 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 AC010487.4-201ENST00000637027 61 ntBASIC0.45□□□□□ -2.34
FOXN4Q96NZ1 RNU6-664P-201ENST00000362381 107 ntBASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 SNORD115-27-201ENST00000364430 82 ntBASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 RNU6-726P-201ENST00000364680 107 ntBASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 SNORD101-201ENST00000384027 73 ntBASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 SNORA8.2-201ENST00000384372 139 ntBASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 RNU6-287P-201ENST00000516230 98 ntBASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 MIR4696-201ENST00000581431 70 ntBASIC0.44□□□□□ -2.34
FOXN4Q96NZ1 Y_RNA.17-201ENST00000362433 111 ntBASIC0.43□□□□□ -2.34
FOXN4Q96NZ1 Y_RNA.43-201ENST00000362670 111 ntBASIC0.43□□□□□ -2.34
FOXN4Q96NZ1 Y_RNA.207-201ENST00000364142 106 ntBASIC0.43□□□□□ -2.34
FOXN4Q96NZ1 RNA5SP292-201ENST00000390974 118 ntBASIC0.43□□□□□ -2.34
FOXN4Q96NZ1 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
FOXN4Q96NZ1 MIR548AG2-201ENST00000581228 64 ntBASIC0.43□□□□□ -2.34
FOXN4Q96NZ1 MIR7107-201ENST00000611489 80 ntBASIC0.43□□□□□ -2.34
FOXN4Q96NZ1 MIR6828-201ENST00000636181 60 ntBASIC0.43□□□□□ -2.34
FOXN4Q96NZ1 RNU6-219P-201ENST00000364728 107 ntBASIC0.42□□□□□ -2.34
FOXN4Q96NZ1 RNU6-811P-201ENST00000384069 107 ntBASIC0.42□□□□□ -2.34
FOXN4Q96NZ1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
FOXN4Q96NZ1 Y_RNA.593-201ENST00000410292 98 ntBASIC0.42□□□□□ -2.34
FOXN4Q96NZ1 Y_RNA.620-201ENST00000411009 88 ntBASIC0.42□□□□□ -2.34
FOXN4Q96NZ1 MIR3064-201ENST00000581130 66 ntBASIC0.42□□□□□ -2.34
FOXN4Q96NZ1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 Y_RNA.239-201ENST00000364444 113 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 SNORD41.1-201ENST00000391000 69 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 RNU6-269P-201ENST00000391077 97 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 MIR2113-201ENST00000459007 91 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 RNU7-153P-201ENST00000516455 62 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 AC104996.3-201ENST00000590718 94 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 AC006254.2-201ENST00000603259 279 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 MTRNR2L2-201ENST00000604882 87 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.41□□□□□ -2.34
FOXN4Q96NZ1 MIR494-201ENST00000349529 81 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 SNORD115-44-201ENST00000365391 82 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 Y_RNA.491-201ENST00000384417 107 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 MIR548U-201ENST00000390728 81 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 SNORA40.8-201ENST00000411034 126 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 RNU6-1052P-201ENST00000411398 104 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 AC069271.1-201ENST00000445577 156 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 SNORA18.5-201ENST00000516616 101 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 RNU6-719P-201ENST00000516671 104 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 RNU6-762P-201ENST00000517107 102 ntBASIC0.4□□□□□ -2.35
FOXN4Q96NZ1 MIR4752-201ENST00000579672 72 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms