Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 MIR6844-201ENST00000637122 62 ntBASIC-1.43□□□□□ -2.64
LRRC39Q96DD0 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 RNU6-495P-201ENST00000362995 107 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 RNU4-40P-201ENST00000364351 143 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 SNORD18B-201ENST00000365659 72 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 MIR759-201ENST00000390224 91 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 SNORD127-201ENST00000458892 86 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 AC107027.2-201ENST00000512197 115 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 AC068339.1-201ENST00000526965 141 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 MIR3646-201ENST00000578301 84 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 MIR6888-201ENST00000621977 67 ntBASIC-1.44□□□□□ -2.64
LRRC39Q96DD0 RNU6-363P-201ENST00000362895 105 ntBASIC-1.45□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.45□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.45□□□□□ -2.64
LRRC39Q96DD0 AC021146.9-201ENST00000512503 156 ntBASIC-1.45□□□□□ -2.64
LRRC39Q96DD0 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.45□□□□□ -2.64
LRRC39Q96DD0 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.45□□□□□ -2.64
LRRC39Q96DD0 AL445584.3-201ENST00000617173 78 ntBASIC-1.45□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.46□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.46□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.46□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.46□□□□□ -2.64
LRRC39Q96DD0 AL353803.5-201ENST00000599815 141 ntBASIC-1.46□□□□□ -2.64
LRRC39Q96DD0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.46□□□□□ -2.64
LRRC39Q96DD0 MIR3658-201ENST00000636291 56 ntBASIC-1.46□□□□□ -2.64
LRRC39Q96DD0 RNU6-713P-201ENST00000384761 107 ntBASIC-1.47□□□□□ -2.64
LRRC39Q96DD0 MIR587-201ENST00000384845 96 ntBASIC-1.47□□□□□ -2.64
LRRC39Q96DD0 RNU7-134P-201ENST00000458997 64 ntBASIC-1.47□□□□□ -2.64
LRRC39Q96DD0 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.47□□□□□ -2.64
LRRC39Q96DD0 MIR4324-201ENST00000584846 72 ntBASIC-1.47□□□□□ -2.64
LRRC39Q96DD0 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 SNORA24B-201ENST00000384176 131 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 MIR548D2-201ENST00000384955 97 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 RNU7-85P-201ENST00000458851 63 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 RNU6-479P-201ENST00000516348 105 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 MIR3140-201ENST00000583685 90 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 AL442128.1-201ENST00000615151 90 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 AC025521.1-201ENST00000621624 286 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 U6.96-201ENST00000636425 70 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 AC132825.6-201ENST00000638861 357 ntBASIC-1.48□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.49□□□□□ -2.65
LRRC39Q96DD0 RNU6-132P-201ENST00000383863 107 ntBASIC-1.49□□□□□ -2.65
LRRC39Q96DD0 RNU6-918P-201ENST00000391219 106 ntBASIC-1.49□□□□□ -2.65
LRRC39Q96DD0 RNU6-985P-201ENST00000410182 104 ntBASIC-1.49□□□□□ -2.65
LRRC39Q96DD0 MIR8062-201ENST00000621515 85 ntBASIC-1.49□□□□□ -2.65
LRRC39Q96DD0 SNORA63.2-201ENST00000362603 126 ntBASIC-1.5□□□□□ -2.65
LRRC39Q96DD0 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.5□□□□□ -2.65
LRRC39Q96DD0 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.5□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.5□□□□□ -2.65
LRRC39Q96DD0 RNU6-746P-201ENST00000384112 109 ntBASIC-1.5□□□□□ -2.65
LRRC39Q96DD0 MIR29B1-201ENST00000385015 81 ntBASIC-1.5□□□□□ -2.65
LRRC39Q96DD0 MIR548P-201ENST00000408336 84 ntBASIC-1.5□□□□□ -2.65
LRRC39Q96DD0 MIR6738-201ENST00000619620 64 ntBASIC-1.5□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 SNORD50.2-201ENST00000365465 70 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 RNU6-409P-201ENST00000384114 104 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 MIR1302-6-201ENST00000408466 90 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 MTND2P23-201ENST00000422990 651 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 RNU6-65P-201ENST00000516332 98 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 AC134503.1-201ENST00000633048 54 ntBASIC-1.51□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.52□□□□□ -2.65
LRRC39Q96DD0 SNORD75.2-201ENST00000408784 58 ntBASIC-1.52□□□□□ -2.65
LRRC39Q96DD0 MTND5P20-201ENST00000448677 143 ntBASIC-1.52□□□□□ -2.65
LRRC39Q96DD0 RNU7-24P-201ENST00000458867 62 ntBASIC-1.52□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.52□□□□□ -2.65
LRRC39Q96DD0 MIR4536-1-201ENST00000583537 88 ntBASIC-1.52□□□□□ -2.65
LRRC39Q96DD0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.53□□□□□ -2.65
LRRC39Q96DD0 RNU2-38P-201ENST00000410856 79 ntBASIC-1.53□□□□□ -2.65
LRRC39Q96DD0 SNORD57-201ENST00000448188 72 ntBASIC-1.53□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.53□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.53□□□□□ -2.65
LRRC39Q96DD0 MIR6818-201ENST00000621576 65 ntBASIC-1.53□□□□□ -2.65
LRRC39Q96DD0 AL160413.1-201ENST00000622780 310 ntBASIC-1.53□□□□□ -2.65
LRRC39Q96DD0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.53□□□□□ -2.65
LRRC39Q96DD0 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 RNU6-312P-201ENST00000364629 107 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 SNORD58.1-201ENST00000391313 66 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 SNORD63.1-201ENST00000516178 80 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 RNU7-121P-201ENST00000516604 62 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 MIR3121-201ENST00000579680 77 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 MIR3171-201ENST00000584270 74 ntBASIC-1.54□□□□□ -2.66
LRRC39Q96DD0 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.55□□□□□ -2.66
LRRC39Q96DD0 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.55□□□□□ -2.66
LRRC39Q96DD0 MIR548A1-201ENST00000385041 97 ntBASIC-1.55□□□□□ -2.66
LRRC39Q96DD0 MT-TD-201ENST00000387419 68 ntBASIC-1.55□□□□□ -2.66
LRRC39Q96DD0 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.55□□□□□ -2.66
LRRC39Q96DD0 SNORA26.4-201ENST00000391188 123 ntBASIC-1.55□□□□□ -2.66
LRRC39Q96DD0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.55□□□□□ -2.66
LRRC39Q96DD0 RNA5SP266-201ENST00000410273 108 ntBASIC-1.55□□□□□ -2.66
LRRC39Q96DD0 AC020661.2-201ENST00000560114 134 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms