Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 MIR3064-201ENST00000581130 66 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 MIR4696-201ENST00000581431 70 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 AC022709.1-201ENST00000615967 87 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 MIR6828-201ENST00000636181 60 ntBASIC0.93□□□□□ -2.26
ERCC4Q92889 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
ERCC4Q92889 RNU6-664P-201ENST00000362381 107 ntBASIC0.92□□□□□ -2.26
ERCC4Q92889 RNU6-1152P-201ENST00000384576 107 ntBASIC0.92□□□□□ -2.26
ERCC4Q92889 MIR519C-201ENST00000385053 87 ntBASIC0.92□□□□□ -2.26
ERCC4Q92889 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
ERCC4Q92889 MIR3920-201ENST00000581751 86 ntBASIC0.92□□□□□ -2.26
ERCC4Q92889 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
ERCC4Q92889 AC104996.3-201ENST00000590718 94 ntBASIC0.92□□□□□ -2.26
ERCC4Q92889 Y_RNA.36-201ENST00000362602 112 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 RNY1P1-201ENST00000364372 112 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 SNORD115-44-201ENST00000365391 82 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 RNU6-979P-201ENST00000383896 107 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 RNU6-811P-201ENST00000384069 107 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 MIR1236-201ENST00000408340 102 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 SCARNA16.5-201ENST00000517114 183 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 IGLL4P-201ENST00000614590 133 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.91□□□□□ -2.26
ERCC4Q92889 MIR548BB-201ENST00000626714 66 ntBASIC0.91□□□□□ -2.26
ERCC4Q92889 SNORD101-201ENST00000384027 73 ntBASIC0.9□□□□□ -2.27
ERCC4Q92889 RNA5SP292-201ENST00000390974 118 ntBASIC0.9□□□□□ -2.27
ERCC4Q92889 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.27
ERCC4Q92889 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.9□□□□□ -2.27
ERCC4Q92889 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.9□□□□□ -2.27
ERCC4Q92889 MIR494-201ENST00000349529 81 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 MIRLET7F1-201ENST00000362202 87 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 Y_RNA.73-201ENST00000362910 113 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 RNU4-32P-201ENST00000363404 141 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 SNORA36.1-201ENST00000363424 132 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 SNORD114-26-201ENST00000363543 72 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 Y_RNA.388-201ENST00000383919 113 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 MIR548U-201ENST00000390728 81 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 SNORA26.2-201ENST00000390922 122 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 MIR548J-201ENST00000408833 112 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 RNU7-13P-201ENST00000516413 62 ntBASIC0.89□□□□□ -2.27
ERCC4Q92889 Y_RNA.207-201ENST00000364142 106 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 RNU6-1229P-201ENST00000364295 107 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 RNU6-726P-201ENST00000364680 107 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 RNU7-104P-201ENST00000459398 79 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 RNA5SP94-201ENST00000516917 108 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 MIR548AG2-201ENST00000581228 64 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 MIR5588-201ENST00000581890 63 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 AC067863.3-201ENST00000624172 122 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 AC006160.2-201ENST00000637708 154 ntBASIC0.88□□□□□ -2.27
ERCC4Q92889 RNU6-1126P-201ENST00000384002 107 ntBASIC0.87□□□□□ -2.27
ERCC4Q92889 Y_RNA.491-201ENST00000384417 107 ntBASIC0.87□□□□□ -2.27
ERCC4Q92889 AC022137.1-201ENST00000483735 151 ntBASIC0.87□□□□□ -2.27
ERCC4Q92889 RNU6-287P-201ENST00000516230 98 ntBASIC0.87□□□□□ -2.27
ERCC4Q92889 SNORA18.5-201ENST00000516616 101 ntBASIC0.87□□□□□ -2.27
ERCC4Q92889 Y_RNA.239-201ENST00000364444 113 ntBASIC0.86□□□□□ -2.27
ERCC4Q92889 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
ERCC4Q92889 RNU7-153P-201ENST00000516455 62 ntBASIC0.86□□□□□ -2.27
ERCC4Q92889 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
ERCC4Q92889 RNY1P8-201ENST00000383970 114 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 RNU6-935P-201ENST00000410371 100 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 Y_RNA.611-201ENST00000410682 108 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.85□□□□□ -2.27
ERCC4Q92889 RNU7-171P-201ENST00000459581 62 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 AC093729.1-201ENST00000513074 128 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 SNORA72.7-201ENST00000516349 94 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 AC140658.3-201ENST00000567603 271 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 MIR4796-201ENST00000580742 81 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.85□□□□□ -2.27
ERCC4Q92889 MIR617-201ENST00000385030 97 ntBASIC0.84□□□□□ -2.27
ERCC4Q92889 MIR140-201ENST00000385282 100 ntBASIC0.84□□□□□ -2.27
ERCC4Q92889 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
ERCC4Q92889 Y_RNA.540-201ENST00000384638 111 ntBASIC0.83□□□□□ -2.28
ERCC4Q92889 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.83□□□□□ -2.28
ERCC4Q92889 RNU6-592P-201ENST00000411333 103 ntBASIC0.83□□□□□ -2.28
ERCC4Q92889 MIR2113-201ENST00000459007 91 ntBASIC0.83□□□□□ -2.28
ERCC4Q92889 CYP3A137P-201ENST00000562436 69 ntBASIC0.83□□□□□ -2.28
ERCC4Q92889 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.83□□□□□ -2.28
ERCC4Q92889 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
ERCC4Q92889 Y_RNA.426-201ENST00000384068 113 ntBASIC0.82□□□□□ -2.28
ERCC4Q92889 SNORA25.13-201ENST00000516395 103 ntBASIC0.82□□□□□ -2.28
ERCC4Q92889 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.82□□□□□ -2.28
ERCC4Q92889 AL162376.1-201ENST00000624117 175 ntBASIC0.82□□□□□ -2.28
ERCC4Q92889 RNU6-624P-201ENST00000363411 107 ntBASIC0.81□□□□□ -2.28
ERCC4Q92889 MIR519E-201ENST00000385075 84 ntBASIC0.81□□□□□ -2.28
ERCC4Q92889 Y_RNA.607-201ENST00000410597 98 ntBASIC0.81□□□□□ -2.28
ERCC4Q92889 RNA5SP268-201ENST00000516828 124 ntBASIC0.81□□□□□ -2.28
ERCC4Q92889 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
ERCC4Q92889 SNORD115-37-201ENST00000363768 82 ntBASIC0.8□□□□□ -2.28
ERCC4Q92889 RNA5SP517-201ENST00000364724 117 ntBASIC0.8□□□□□ -2.28
ERCC4Q92889 RNU6-1276P-201ENST00000365372 104 ntBASIC0.8□□□□□ -2.28
ERCC4Q92889 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
ERCC4Q92889 SNORA8.2-201ENST00000384372 139 ntBASIC0.8□□□□□ -2.28
ERCC4Q92889 SNORD90-201ENST00000391145 111 ntBASIC0.8□□□□□ -2.28
ERCC4Q92889 AC093423.1-201ENST00000440817 142 ntBASIC0.8□□□□□ -2.28
ERCC4Q92889 MIR7107-201ENST00000611489 80 ntBASIC0.8□□□□□ -2.28
ERCC4Q92889 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
ERCC4Q92889 RNA5SP173-201ENST00000364857 136 ntBASIC0.79□□□□□ -2.28
ERCC4Q92889 RNU6-716P-201ENST00000365621 103 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 285.3 ms