Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNA5SP517-201ENST00000364724 117 ntBASIC0.66□□□□□ -2.3
ATG4AQ8WYN0 Y_RNA.369-201ENST00000365568 117 ntBASIC0.66□□□□□ -2.3
ATG4AQ8WYN0 SNORA8.2-201ENST00000384372 139 ntBASIC0.66□□□□□ -2.3
ATG4AQ8WYN0 MIR598-201ENST00000384868 97 ntBASIC0.66□□□□□ -2.3
ATG4AQ8WYN0 MIR548L-201ENST00000408303 86 ntBASIC0.66□□□□□ -2.3
ATG4AQ8WYN0 RNA5SP227-201ENST00000516184 113 ntBASIC0.66□□□□□ -2.3
ATG4AQ8WYN0 MIR3920-201ENST00000581751 86 ntBASIC0.66□□□□□ -2.3
ATG4AQ8WYN0 RNU6-716P-201ENST00000365621 103 ntBASIC0.65□□□□□ -2.31
ATG4AQ8WYN0 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
ATG4AQ8WYN0 SNORD41.1-201ENST00000391000 69 ntBASIC0.65□□□□□ -2.31
ATG4AQ8WYN0 SNORD101-201ENST00000384027 73 ntBASIC0.64□□□□□ -2.31
ATG4AQ8WYN0 SNORD116-22-201ENST00000384430 92 ntBASIC0.64□□□□□ -2.31
ATG4AQ8WYN0 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
ATG4AQ8WYN0 RNU6-664P-201ENST00000362381 107 ntBASIC0.63□□□□□ -2.31
ATG4AQ8WYN0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.63□□□□□ -2.31
ATG4AQ8WYN0 MIR4696-201ENST00000581431 70 ntBASIC0.63□□□□□ -2.31
ATG4AQ8WYN0 MIR4668-201ENST00000582284 70 ntBASIC0.63□□□□□ -2.31
ATG4AQ8WYN0 MIR7107-201ENST00000611489 80 ntBASIC0.63□□□□□ -2.31
ATG4AQ8WYN0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.63□□□□□ -2.31
ATG4AQ8WYN0 RNU6-1134P-201ENST00000365156 101 ntBASIC0.62□□□□□ -2.31
ATG4AQ8WYN0 MIR548U-201ENST00000390728 81 ntBASIC0.62□□□□□ -2.31
ATG4AQ8WYN0 SNORA40.8-201ENST00000411034 126 ntBASIC0.62□□□□□ -2.31
ATG4AQ8WYN0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ATG4AQ8WYN0 MIRLET7F1-201ENST00000362202 87 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 Y_RNA.43-201ENST00000362670 111 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 SNORD118-201ENST00000363593 134 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 Y_RNA.207-201ENST00000364142 106 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 RNU6-132P-201ENST00000383863 107 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 RNU6-811P-201ENST00000384069 107 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 RNY1P4-201ENST00000384595 115 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 RNA5SP436-201ENST00000516020 115 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 RNU6-287P-201ENST00000516230 98 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 MIR3064-201ENST00000581130 66 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 MIR548AG2-201ENST00000581228 64 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 AC104996.3-201ENST00000590718 94 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.61□□□□□ -2.31
ATG4AQ8WYN0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 RNU4-32P-201ENST00000363404 141 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 Y_RNA.239-201ENST00000364444 113 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 RNU6-294P-201ENST00000364999 102 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 MIR617-201ENST00000385030 97 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 Y_RNA.620-201ENST00000411009 88 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 MIR2113-201ENST00000459007 91 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 RNU7-74P-201ENST00000459104 62 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 SNORA25.18-201ENST00000607153 114 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 AL162376.1-201ENST00000624117 175 ntBASIC0.6□□□□□ -2.31
ATG4AQ8WYN0 RNU6-1255P-201ENST00000363434 112 ntBASIC0.59□□□□□ -2.31
ATG4AQ8WYN0 RNU6-219P-201ENST00000364728 107 ntBASIC0.59□□□□□ -2.31
ATG4AQ8WYN0 MIR518A1-201ENST00000385068 85 ntBASIC0.59□□□□□ -2.31
ATG4AQ8WYN0 RNU6-935P-201ENST00000410371 100 ntBASIC0.59□□□□□ -2.31
ATG4AQ8WYN0 RNU6-402P-201ENST00000410678 103 ntBASIC0.59□□□□□ -2.31
ATG4AQ8WYN0 RNA5SP480-201ENST00000516840 109 ntBASIC0.59□□□□□ -2.31
ATG4AQ8WYN0 RNU6-633P-201ENST00000362612 103 ntBASIC0.58□□□□□ -2.32
ATG4AQ8WYN0 Y_RNA.558-201ENST00000384685 113 ntBASIC0.58□□□□□ -2.32
ATG4AQ8WYN0 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
ATG4AQ8WYN0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.58□□□□□ -2.32
ATG4AQ8WYN0 Y_RNA.17-201ENST00000362433 111 ntBASIC0.57□□□□□ -2.32
ATG4AQ8WYN0 RNU6-675P-201ENST00000384236 104 ntBASIC0.57□□□□□ -2.32
ATG4AQ8WYN0 Y_RNA.491-201ENST00000384417 107 ntBASIC0.57□□□□□ -2.32
ATG4AQ8WYN0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.57□□□□□ -2.32
ATG4AQ8WYN0 MIR519E-201ENST00000385075 84 ntBASIC0.57□□□□□ -2.32
ATG4AQ8WYN0 RNU6-269P-201ENST00000391077 97 ntBASIC0.57□□□□□ -2.32
ATG4AQ8WYN0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
ATG4AQ8WYN0 MIR1236-201ENST00000408340 102 ntBASIC0.57□□□□□ -2.32
ATG4AQ8WYN0 SNORD115-27-201ENST00000364430 82 ntBASIC0.56□□□□□ -2.32
ATG4AQ8WYN0 RNA5SP292-201ENST00000390974 118 ntBASIC0.56□□□□□ -2.32
ATG4AQ8WYN0 Y_RNA.593-201ENST00000410292 98 ntBASIC0.56□□□□□ -2.32
ATG4AQ8WYN0 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
ATG4AQ8WYN0 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
ATG4AQ8WYN0 RNU6-1057P-201ENST00000517162 102 ntBASIC0.56□□□□□ -2.32
ATG4AQ8WYN0 RNU6-509P-201ENST00000363519 107 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 MIR519C-201ENST00000385053 87 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 RNU6-267P-201ENST00000516714 103 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 AC073869.9-201ENST00000641610 120 ntBASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
ATG4AQ8WYN0 RNU6-497P-201ENST00000365316 104 ntBASIC0.54□□□□□ -2.32
ATG4AQ8WYN0 MIR451A-201ENST00000385059 72 ntBASIC0.54□□□□□ -2.32
ATG4AQ8WYN0 MIR216A-201ENST00000385063 110 ntBASIC0.54□□□□□ -2.32
ATG4AQ8WYN0 SNORA18.5-201ENST00000516616 101 ntBASIC0.54□□□□□ -2.32
ATG4AQ8WYN0 AC006254.2-201ENST00000603259 279 ntBASIC0.54□□□□□ -2.32
ATG4AQ8WYN0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.53□□□□□ -2.32
ATG4AQ8WYN0 RNU2-59P-201ENST00000410482 191 ntBASIC0.53□□□□□ -2.32
ATG4AQ8WYN0 AC069271.1-201ENST00000445577 156 ntBASIC0.53□□□□□ -2.32
ATG4AQ8WYN0 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
ATG4AQ8WYN0 SNORD114-26-201ENST00000363543 72 ntBASIC0.52□□□□□ -2.33
ATG4AQ8WYN0 MIR7-2-201ENST00000384970 110 ntBASIC0.52□□□□□ -2.33
ATG4AQ8WYN0 MIR216B-201ENST00000390186 82 ntBASIC0.52□□□□□ -2.33
ATG4AQ8WYN0 MIR4796-201ENST00000580742 81 ntBASIC0.52□□□□□ -2.33
ATG4AQ8WYN0 RN7SL793P-201ENST00000583259 296 ntBASIC0.52□□□□□ -2.33
ATG4AQ8WYN0 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms