Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNA5SP67-201ENST00000516422 131 ntBASIC-0.08□□□□□ -2.42
SHROOM3Q8TF72 RNU6-971P-201ENST00000516920 106 ntBASIC-0.08□□□□□ -2.42
SHROOM3Q8TF72 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 RNA5SP403-201ENST00000363598 108 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 RNY4P6-201ENST00000363667 96 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 RNA5SP484-201ENST00000458857 111 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 RNU7-107P-201ENST00000459121 61 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 RNU6-255P-201ENST00000516957 105 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 CR383656.4-201ENST00000546909 122 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 MIR3920-201ENST00000581751 86 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 uc_338.10-201ENST00000621872 182 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.09□□□□□ -2.42
SHROOM3Q8TF72 RNU6-524P-201ENST00000384270 107 ntBASIC-0.1□□□□□ -2.42
SHROOM3Q8TF72 MIR548I1-201ENST00000408810 149 ntBASIC-0.1□□□□□ -2.42
SHROOM3Q8TF72 RNU7-165P-201ENST00000458864 60 ntBASIC-0.1□□□□□ -2.42
SHROOM3Q8TF72 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.1□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.1□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.1□□□□□ -2.43
SHROOM3Q8TF72 MIR224-201ENST00000384889 81 ntBASIC-0.1□□□□□ -2.43
SHROOM3Q8TF72 MT-TY-201ENST00000387409 66 ntBASIC-0.1□□□□□ -2.43
SHROOM3Q8TF72 RNU6-907P-201ENST00000390924 102 ntBASIC-0.1□□□□□ -2.43
SHROOM3Q8TF72 RNU6-466P-201ENST00000391224 103 ntBASIC-0.1□□□□□ -2.43
SHROOM3Q8TF72 SNORD57-201ENST00000448188 72 ntBASIC-0.1□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.11□□□□□ -2.43
SHROOM3Q8TF72 SNORA32.3-201ENST00000384772 121 ntBASIC-0.11□□□□□ -2.43
SHROOM3Q8TF72 MIR216B-201ENST00000390186 82 ntBASIC-0.11□□□□□ -2.43
SHROOM3Q8TF72 RNU7-106P-201ENST00000459514 67 ntBASIC-0.11□□□□□ -2.43
SHROOM3Q8TF72 AL513043.2-201ENST00000573941 143 ntBASIC-0.11□□□□□ -2.43
SHROOM3Q8TF72 MIR548AG2-201ENST00000581228 64 ntBASIC-0.11□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 RNU1-141P-201ENST00000364623 158 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 MIR548G-201ENST00000408442 89 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 AL161932.1-201ENST00000437408 146 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 MIR371B-201ENST00000638082 66 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 RNU6-652P-201ENST00000365488 107 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 SNORD101-201ENST00000384027 73 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 RNU6-816P-201ENST00000390914 107 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 SPINT5P-201ENST00000448174 155 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 RNU6-346P-201ENST00000516288 111 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 MIR3613-201ENST00000579844 87 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 MIR4536-1-201ENST00000583537 88 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 AC025521.1-201ENST00000621624 286 ntBASIC-0.12□□□□□ -2.43
SHROOM3Q8TF72 MIR20A-201ENST00000362279 71 ntBASIC-0.13□□□□□ -2.43
SHROOM3Q8TF72 RNU6-161P-201ENST00000363051 106 ntBASIC-0.13□□□□□ -2.43
SHROOM3Q8TF72 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.13□□□□□ -2.43
SHROOM3Q8TF72 MIR2113-201ENST00000459007 91 ntBASIC-0.13□□□□□ -2.43
SHROOM3Q8TF72 U7.6-201ENST00000610841 64 ntBASIC-0.13□□□□□ -2.43
SHROOM3Q8TF72 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
SHROOM3Q8TF72 SNORA7.5-201ENST00000410672 110 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 RNU4-36P-201ENST00000364294 144 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 SNORD45B-201ENST00000364617 72 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 SNORD115-44-201ENST00000365391 82 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 MIR181B2-201ENST00000385004 89 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 MIR548A3-201ENST00000385297 97 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 RNU6-75P-201ENST00000515944 104 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 RNU6-412P-201ENST00000516434 106 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 RNU6-180P-201ENST00000516697 61 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 MIR6129-201ENST00000616087 109 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 TRDV1-202ENST00000621643 102 ntBASIC-0.14□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 SNORD49B-201ENST00000365172 72 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 MIR451A-201ENST00000385059 72 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 AC093423.1-201ENST00000440817 142 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 SNORD2-201ENST00000459163 69 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 RNU7-61P-201ENST00000515897 61 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 RNU7-188P-201ENST00000517063 64 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 NAMPTP3-201ENST00000569273 224 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 MIR4679-2-201ENST00000578358 77 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 MIR6514-201ENST00000622549 70 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 AL035470.1-201ENST00000622571 220 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 RNY1P5-201ENST00000383890 115 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 AC244250.2-201ENST00000418731 148 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 RNU6-719P-201ENST00000516671 104 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 YWHAEP2-201ENST00000580066 112 ntBASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.15□□□□□ -2.43
SHROOM3Q8TF72 RNY3P2-201ENST00000362918 102 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 RNU6-480P-201ENST00000384332 107 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 RNU6-959P-201ENST00000384671 107 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 MIR106A-201ENST00000384870 81 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 MIR548M-201ENST00000408260 86 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 RNU6-935P-201ENST00000410371 100 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 SNORA19.1-201ENST00000410656 129 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 MIR5009-201ENST00000578736 100 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 273.8 ms