Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR889-201ENST00000401280 79 ntBASIC1.61□□□□□ -2.15
SIX5Q8N196 RPS29P23-201ENST00000458635 123 ntBASIC1.61□□□□□ -2.15
SIX5Q8N196 RNA5SP480-201ENST00000516840 109 ntBASIC1.61□□□□□ -2.15
SIX5Q8N196 AC145423.2-201ENST00000610631 239 ntBASIC1.61□□□□□ -2.15
SIX5Q8N196 U7.4-201ENST00000614961 63 ntBASIC1.61□□□□□ -2.15
SIX5Q8N196 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SIX5Q8N196 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
SIX5Q8N196 MIR1323-201ENST00000408090 73 ntBASIC1.6□□□□□ -2.15
SIX5Q8N196 RNU6-135P-201ENST00000516769 101 ntBASIC1.6□□□□□ -2.15
SIX5Q8N196 RNU6-807P-201ENST00000516805 107 ntBASIC1.6□□□□□ -2.15
SIX5Q8N196 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
SIX5Q8N196 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.6□□□□□ -2.15
SIX5Q8N196 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.59□□□□□ -2.15
SIX5Q8N196 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SIX5Q8N196 MIR26B-201ENST00000362251 77 ntBASIC1.59□□□□□ -2.15
SIX5Q8N196 MIR451A-201ENST00000385059 72 ntBASIC1.59□□□□□ -2.15
SIX5Q8N196 AC002350.1-201ENST00000490759 375 ntBASIC1.59□□□□□ -2.15
SIX5Q8N196 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.59□□□□□ -2.15
SIX5Q8N196 AL353770.2-201ENST00000620024 78 ntBASIC1.59□□□□□ -2.15
SIX5Q8N196 Y_RNA.207-201ENST00000364142 106 ntBASIC1.58□□□□□ -2.16
SIX5Q8N196 SNORD90-201ENST00000391145 111 ntBASIC1.58□□□□□ -2.16
SIX5Q8N196 RNU7-104P-201ENST00000459398 79 ntBASIC1.58□□□□□ -2.16
SIX5Q8N196 SNORD124-201ENST00000459577 104 ntBASIC1.57□□□□□ -2.16
SIX5Q8N196 RNU6-1229P-201ENST00000364295 107 ntBASIC1.56□□□□□ -2.16
SIX5Q8N196 RNU6-287P-201ENST00000516230 98 ntBASIC1.56□□□□□ -2.16
SIX5Q8N196 MIR1297-201ENST00000637311 77 ntBASIC1.56□□□□□ -2.16
SIX5Q8N196 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
SIX5Q8N196 AC025627.3-201ENST00000582078 182 ntBASIC1.55□□□□□ -2.16
SIX5Q8N196 MIR6078-201ENST00000611069 100 ntBASIC1.55□□□□□ -2.16
SIX5Q8N196 Y_RNA.12-201ENST00000362393 112 ntBASIC1.54□□□□□ -2.16
SIX5Q8N196 RNA5SP403-201ENST00000363598 108 ntBASIC1.54□□□□□ -2.16
SIX5Q8N196 SNORD114-24-201ENST00000365029 72 ntBASIC1.54□□□□□ -2.16
SIX5Q8N196 MIR644A-201ENST00000385262 94 ntBASIC1.54□□□□□ -2.16
SIX5Q8N196 MIR3140-201ENST00000583685 90 ntBASIC1.54□□□□□ -2.16
SIX5Q8N196 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SIX5Q8N196 RNU6-1052P-201ENST00000411398 104 ntBASIC1.53□□□□□ -2.16
SIX5Q8N196 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
SIX5Q8N196 RNU6-719P-201ENST00000516671 104 ntBASIC1.53□□□□□ -2.16
SIX5Q8N196 RNU7-161P-201ENST00000517289 62 ntBASIC1.53□□□□□ -2.16
SIX5Q8N196 YWHAEP2-201ENST00000580066 112 ntBASIC1.53□□□□□ -2.16
SIX5Q8N196 YWHAEP3-201ENST00000582767 121 ntBASIC1.53□□□□□ -2.16
SIX5Q8N196 MIR4484-201ENST00000582855 83 ntBASIC1.53□□□□□ -2.16
SIX5Q8N196 AC067863.3-201ENST00000624172 122 ntBASIC1.53□□□□□ -2.16
SIX5Q8N196 AC004223.1-201ENST00000479840 271 ntBASIC1.52□□□□□ -2.17
SIX5Q8N196 RNU6-303P-201ENST00000517091 106 ntBASIC1.52□□□□□ -2.17
SIX5Q8N196 MIR548L-201ENST00000408303 86 ntBASIC1.51□□□□□ -2.17
SIX5Q8N196 snoU13.17-201ENST00000458802 104 ntBASIC1.51□□□□□ -2.17
SIX5Q8N196 MIR2113-201ENST00000459007 91 ntBASIC1.51□□□□□ -2.17
SIX5Q8N196 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
SIX5Q8N196 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.51□□□□□ -2.17
SIX5Q8N196 MIR4639-201ENST00000584938 69 ntBASIC1.51□□□□□ -2.17
SIX5Q8N196 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.51□□□□□ -2.17
SIX5Q8N196 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
SIX5Q8N196 Y_RNA.371-201ENST00000365591 113 ntBASIC1.5□□□□□ -2.17
SIX5Q8N196 MIR573-201ENST00000384964 99 ntBASIC1.5□□□□□ -2.17
SIX5Q8N196 U3.27-201ENST00000391237 200 ntBASIC1.5□□□□□ -2.17
SIX5Q8N196 AC073261.1-201ENST00000429409 121 ntBASIC1.5□□□□□ -2.17
SIX5Q8N196 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SIX5Q8N196 MIR96-201ENST00000362288 78 ntBASIC1.49□□□□□ -2.17
SIX5Q8N196 Y_RNA.545-201ENST00000384652 105 ntBASIC1.49□□□□□ -2.17
SIX5Q8N196 MIR3612-201ENST00000579753 87 ntBASIC1.49□□□□□ -2.17
SIX5Q8N196 AC022709.1-201ENST00000615967 87 ntBASIC1.49□□□□□ -2.17
SIX5Q8N196 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.49□□□□□ -2.17
SIX5Q8N196 MIR6515-201ENST00000619843 57 ntBASIC1.49□□□□□ -2.17
SIX5Q8N196 RNU1-124P-201ENST00000363861 145 ntBASIC1.48□□□□□ -2.17
SIX5Q8N196 RNU6-681P-201ENST00000364012 104 ntBASIC1.48□□□□□ -2.17
SIX5Q8N196 RNU6-1126P-201ENST00000384002 107 ntBASIC1.48□□□□□ -2.17
SIX5Q8N196 MIR216B-201ENST00000390186 82 ntBASIC1.48□□□□□ -2.17
SIX5Q8N196 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
SIX5Q8N196 MIR3920-201ENST00000581751 86 ntBASIC1.48□□□□□ -2.17
SIX5Q8N196 MIR6779-201ENST00000617283 64 ntBASIC1.48□□□□□ -2.17
SIX5Q8N196 SNORD114-26-201ENST00000363543 72 ntBASIC1.47□□□□□ -2.17
SIX5Q8N196 RNA5SP325-201ENST00000363756 130 ntBASIC1.47□□□□□ -2.17
SIX5Q8N196 Y_RNA.565-201ENST00000384719 101 ntBASIC1.47□□□□□ -2.17
SIX5Q8N196 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
SIX5Q8N196 SCARNA18B-201ENST00000458806 135 ntBASIC1.47□□□□□ -2.17
SIX5Q8N196 AC244669.1-204ENST00000621564 178 ntBASIC1.47□□□□□ -2.17
SIX5Q8N196 SNORD28-201ENST00000384706 75 ntBASIC1.46□□□□□ -2.18
SIX5Q8N196 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SIX5Q8N196 RNU2-59P-201ENST00000410482 191 ntBASIC1.46□□□□□ -2.18
SIX5Q8N196 RNU7-74P-201ENST00000459104 62 ntBASIC1.46□□□□□ -2.18
SIX5Q8N196 AC097510.1-201ENST00000510945 133 ntBASIC1.46□□□□□ -2.18
SIX5Q8N196 RNA5SP255-201ENST00000516370 107 ntBASIC1.46□□□□□ -2.18
SIX5Q8N196 Y_RNA.681-201ENST00000516445 113 ntBASIC1.46□□□□□ -2.18
SIX5Q8N196 RNU6-1335P-201ENST00000365426 107 ntBASIC1.45□□□□□ -2.18
SIX5Q8N196 MIR617-201ENST00000385030 97 ntBASIC1.45□□□□□ -2.18
SIX5Q8N196 MIR3678-201ENST00000578455 94 ntBASIC1.45□□□□□ -2.18
SIX5Q8N196 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
SIX5Q8N196 Y_RNA.532-201ENST00000384590 113 ntBASIC1.44□□□□□ -2.18
SIX5Q8N196 Y_RNA.788-201ENST00000622394 112 ntBASIC1.44□□□□□ -2.18
SIX5Q8N196 SNORD18A-201ENST00000363753 72 ntBASIC1.43□□□□□ -2.18
SIX5Q8N196 RNU6-340P-201ENST00000364005 107 ntBASIC1.43□□□□□ -2.18
SIX5Q8N196 RNU1-93P-201ENST00000364704 169 ntBASIC1.43□□□□□ -2.18
SIX5Q8N196 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SIX5Q8N196 RNU6-411P-201ENST00000384451 107 ntBASIC1.43□□□□□ -2.18
SIX5Q8N196 RNU6-1177P-201ENST00000391058 104 ntBASIC1.43□□□□□ -2.18
SIX5Q8N196 AC011195.1-201ENST00000578177 177 ntBASIC1.43□□□□□ -2.18
SIX5Q8N196 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
SIX5Q8N196 SNORD114-27-201ENST00000363766 70 ntBASIC1.42□□□□□ -2.18
SIX5Q8N196 SNORA24B-201ENST00000384176 131 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms