Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MIR4696-201ENST00000581431 70 ntBASIC0.45□□□□□ -2.34
LRRTM1Q86UE6 MIR4536-1-201ENST00000583537 88 ntBASIC0.45□□□□□ -2.34
LRRTM1Q86UE6 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
LRRTM1Q86UE6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 RNU6-1255P-201ENST00000363434 112 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 RNU6-219P-201ENST00000364728 107 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 SNORA8.2-201ENST00000384372 139 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 RNU6-466P-201ENST00000391224 103 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.593-201ENST00000410292 98 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 AC069271.1-201ENST00000445577 156 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 RNA5SP121-201ENST00000516537 101 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.694-201ENST00000516677 117 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 RNA5SP268-201ENST00000516828 124 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 AC067863.3-201ENST00000624172 122 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 MIR6828-201ENST00000636181 60 ntBASIC0.44□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.17-201ENST00000362433 111 ntBASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.207-201ENST00000364142 106 ntBASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 RNU6-294P-201ENST00000364999 102 ntBASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 MIR518E-201ENST00000385252 88 ntBASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 RNA5SP227-201ENST00000516184 113 ntBASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 RNU6-65P-201ENST00000516332 98 ntBASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 RNU7-13P-201ENST00000516413 62 ntBASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 MIR4668-201ENST00000582284 70 ntBASIC0.43□□□□□ -2.34
LRRTM1Q86UE6 RNU6-664P-201ENST00000362381 107 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.73-201ENST00000362910 113 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.96-201ENST00000363092 109 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 RNU6-1134P-201ENST00000365156 101 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.369-201ENST00000365568 117 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 RNU6-269P-201ENST00000391077 97 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.620-201ENST00000411009 88 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 RNU6-1052P-201ENST00000411398 104 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 RNU6-719P-201ENST00000516671 104 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 RNU6-762P-201ENST00000517107 102 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 MIR3064-201ENST00000581130 66 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 MTRNR2L2-201ENST00000604882 87 ntBASIC0.42□□□□□ -2.34
LRRTM1Q86UE6 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 SNORD118-201ENST00000363593 134 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 RNU6-1126P-201ENST00000384002 107 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 SNORD101-201ENST00000384027 73 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 SNORD41.1-201ENST00000391000 69 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 MIR548L-201ENST00000408303 86 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.596-201ENST00000410462 109 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 MIR2113-201ENST00000459007 91 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 RNU6-135P-201ENST00000516769 101 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 MIR3140-201ENST00000583685 90 ntBASIC0.41□□□□□ -2.34
LRRTM1Q86UE6 Y_RNA.508-201ENST00000384502 114 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 MIR518A1-201ENST00000385068 85 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 MIR519E-201ENST00000385075 84 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 SNORA40.8-201ENST00000411034 126 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 SNORA18.5-201ENST00000516616 101 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 AC104996.3-201ENST00000590718 94 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 RNU1-29P-201ENST00000606574 126 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 MIR4679-1-201ENST00000637619 75 ntBASIC0.4□□□□□ -2.35
LRRTM1Q86UE6 MIR494-201ENST00000349529 81 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 Y_RNA.43-201ENST00000362670 111 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 SNORD116-22-201ENST00000384430 92 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 RNA5SP484-201ENST00000458857 111 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 RNU6-229P-201ENST00000516614 102 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 SNORA70.25-201ENST00000612741 95 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
LRRTM1Q86UE6 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 RNU6-633P-201ENST00000362612 103 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 SNORD73B-201ENST00000364394 72 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 RNU6-497P-201ENST00000365316 104 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 RNU6-811P-201ENST00000384069 107 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 Y_RNA.491-201ENST00000384417 107 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 AC062037.1-201ENST00000605302 128 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 MIR6755-201ENST00000619993 66 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 AL162376.1-201ENST00000624117 175 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 MIR548BB-201ENST00000626714 66 ntBASIC0.38□□□□□ -2.35
LRRTM1Q86UE6 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 RNU6-509P-201ENST00000363519 107 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 RNU6-675P-201ENST00000384236 104 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 MIR451A-201ENST00000385059 72 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 snoU13.18-201ENST00000459483 104 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 FGF7P7-201ENST00000514120 227 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 MIR6515-201ENST00000619843 57 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.37□□□□□ -2.35
LRRTM1Q86UE6 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
LRRTM1Q86UE6 Y_RNA.239-201ENST00000364444 113 ntBASIC0.36□□□□□ -2.35
LRRTM1Q86UE6 MIR617-201ENST00000385030 97 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms