Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SNORD90-201ENST00000391145 111 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 RNU6-972P-201ENST00000391208 107 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 SNORD4B-201ENST00000459083 72 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 AC062037.1-201ENST00000605302 128 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 MIR8087-201ENST00000612745 78 ntBASIC0.47□□□□□ -2.33
NHLRC1Q6VVB1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.17-201ENST00000362433 111 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.73-201ENST00000362910 113 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 SNORA36.1-201ENST00000363424 132 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 RNA5SP403-201ENST00000363598 108 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 SNORD116-10-201ENST00000363791 102 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.283-201ENST00000364798 112 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-294P-201ENST00000364999 102 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.388-201ENST00000383919 113 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-524P-201ENST00000384270 107 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 MIR635-201ENST00000384830 98 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 MIR599-201ENST00000385069 95 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-1254P-201ENST00000391266 104 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.609-201ENST00000410669 89 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-402P-201ENST00000410678 103 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.620-201ENST00000411009 88 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 AC097635.1-201ENST00000450678 155 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.809-201ENST00000516058 95 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 MIR548AG2-201ENST00000581228 64 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 MIR2052-201ENST00000636055 55 ntBASIC0.46□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-1125P-201ENST00000363601 107 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.221-201ENST00000364248 96 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 SNORD73B-201ENST00000364394 72 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-675P-201ENST00000384236 104 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-480P-201ENST00000384332 107 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 RNA5SP292-201ENST00000390974 118 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-592P-201ENST00000411333 103 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.648-201ENST00000459455 110 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 RNA5SP330-201ENST00000517096 96 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 MIR3678-201ENST00000578455 94 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 MIR548H5-201ENST00000580314 60 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 MIR4668-201ENST00000582284 70 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 TRDV1-202ENST00000621643 102 ntBASIC0.45□□□□□ -2.34
NHLRC1Q6VVB1 MIR330-201ENST00000362196 94 ntBASIC0.44□□□□□ -2.34
NHLRC1Q6VVB1 MIRLET7F1-201ENST00000362202 87 ntBASIC0.44□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.220-201ENST00000364244 109 ntBASIC0.44□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-716P-201ENST00000365621 103 ntBASIC0.44□□□□□ -2.34
NHLRC1Q6VVB1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.44□□□□□ -2.34
NHLRC1Q6VVB1 RNU7-153P-201ENST00000516455 62 ntBASIC0.44□□□□□ -2.34
NHLRC1Q6VVB1 AC138869.1-201ENST00000568623 124 ntBASIC0.44□□□□□ -2.34
NHLRC1Q6VVB1 MTRNR2L2-201ENST00000604882 87 ntBASIC0.44□□□□□ -2.34
NHLRC1Q6VVB1 SNORD115-24-201ENST00000363528 82 ntBASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 SNORD28-201ENST00000384706 75 ntBASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-243P-201ENST00000391140 107 ntBASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 SNORD71-201ENST00000411292 86 ntBASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 RNA5SP47-201ENST00000517230 109 ntBASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 AL109933.3-201ENST00000619095 188 ntBASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 AC244669.1-204ENST00000621564 178 ntBASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.43□□□□□ -2.34
NHLRC1Q6VVB1 MIR494-201ENST00000349529 81 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 AC090625.1-201ENST00000357130 210 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-787P-201ENST00000384032 107 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 RNA5SP193-201ENST00000410353 107 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 RNA5SP94-201ENST00000516917 108 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 MIR3920-201ENST00000581751 86 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 RNU1-29P-201ENST00000606574 126 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-633P-201ENST00000362612 103 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-1134P-201ENST00000365156 101 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 RNA5SP117-201ENST00000365294 118 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 RNU6-519P-201ENST00000410590 108 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 RNY4P29-201ENST00000410801 97 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 MIR3064-201ENST00000581130 66 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 MIR4696-201ENST00000581431 70 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 MIR548BB-201ENST00000626714 66 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 MIR6828-201ENST00000636181 60 ntBASIC0.41□□□□□ -2.34
NHLRC1Q6VVB1 RNU4-32P-201ENST00000363404 141 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-509P-201ENST00000363519 107 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.207-201ENST00000364142 106 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-726P-201ENST00000364680 107 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-979P-201ENST00000383896 107 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.558-201ENST00000384685 113 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 RNU7-104P-201ENST00000459398 79 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 MIR4639-201ENST00000584938 69 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 RNU7-10P-201ENST00000607194 63 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 MIR7107-201ENST00000611489 80 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 AC006160.2-201ENST00000637708 154 ntBASIC0.4□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-664P-201ENST00000362381 107 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.68-201ENST00000362881 102 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 RNA5SP257-201ENST00000363023 116 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.96-201ENST00000363092 109 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms