Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 snoU13.13-201ENST00000458842 104 ntBASIC-0.5□□□□□ -2.49
RPUSD3Q6P087 RNU7-55P-201ENST00000459426 62 ntBASIC-0.5□□□□□ -2.49
RPUSD3Q6P087 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.5□□□□□ -2.49
RPUSD3Q6P087 AC093726.3-201ENST00000637588 150 ntBASIC-0.5□□□□□ -2.49
RPUSD3Q6P087 RNA5SP368-201ENST00000364298 116 ntBASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 RNU6-881P-201ENST00000516813 102 ntBASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 RNU6-388P-201ENST00000517012 105 ntBASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 RNU6-389P-201ENST00000517048 105 ntBASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 MIR4460-201ENST00000577862 86 ntBASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 MIR548X2-201ENST00000579776 100 ntBASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 MIR5704-201ENST00000584029 77 ntBASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPUSD3Q6P087 RNU4-36P-201ENST00000364294 144 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 MIR582-201ENST00000365731 98 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 RNU6-431P-201ENST00000383874 107 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 RNU6-900P-201ENST00000384498 102 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 MIR1263-201ENST00000408324 86 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 AL445193.1-201ENST00000441183 141 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 SPINT5P-201ENST00000448174 155 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 RNU6-90P-201ENST00000606352 106 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 AC004792.1-201ENST00000614523 137 ntBASIC-0.52□□□□□ -2.49
RPUSD3Q6P087 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.53□□□□□ -2.49
RPUSD3Q6P087 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.53□□□□□ -2.49
RPUSD3Q6P087 SNORD116-18-201ENST00000383961 92 ntBASIC-0.53□□□□□ -2.49
RPUSD3Q6P087 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.53□□□□□ -2.49
RPUSD3Q6P087 RNU6-476P-201ENST00000384726 107 ntBASIC-0.53□□□□□ -2.49
RPUSD3Q6P087 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.53□□□□□ -2.49
RPUSD3Q6P087 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.53□□□□□ -2.49
RPUSD3Q6P087 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 SNORD114-25-201ENST00000363742 72 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 SNORD38.1-201ENST00000363863 68 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 SNORD114-29-201ENST00000364819 70 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 RNU6-154P-201ENST00000384306 106 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 RNU6-905P-201ENST00000384434 107 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 MIR224-201ENST00000384889 81 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 MIR548D2-201ENST00000384955 97 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 SNORA7.5-201ENST00000410672 110 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 IGKV1-22-201ENST00000524313 326 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 YWHAEP2-201ENST00000580066 112 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 AC096720.1-201ENST00000604441 183 ntBASIC-0.54□□□□□ -2.5
RPUSD3Q6P087 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 RNU6-363P-201ENST00000362895 105 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 RNY1P7-201ENST00000384743 110 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 MIR2113-201ENST00000459007 91 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 RNU6-182P-201ENST00000516970 105 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 AC007012.1-201ENST00000567192 175 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 MIR4499-201ENST00000584834 69 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 U7.2-201ENST00000607576 63 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 MTND5P18-201ENST00000445624 1801 ntBASIC-0.55□□□□□ -2.5
RPUSD3Q6P087 RNY4P6-201ENST00000363667 96 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 MIR652-201ENST00000385278 98 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 MT-TI-201ENST00000387365 69 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 MT-TY-201ENST00000387409 66 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 MIR216B-201ENST00000390186 82 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 MIR548G-201ENST00000408442 89 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 SCARNA18B-201ENST00000458806 135 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 SNORD22.1-201ENST00000516331 125 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 AP000676.1-201ENST00000533307 52 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 TRDV1-202ENST00000621643 102 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 MIR1255B1-201ENST00000636325 63 ntBASIC-0.56□□□□□ -2.5
RPUSD3Q6P087 RNU6-502P-201ENST00000362419 108 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 RNU6-409P-201ENST00000384114 104 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 SNORA51.5-201ENST00000384126 131 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 MIR147A-201ENST00000385079 72 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 SNORD64-201ENST00000386683 67 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 RNU6-394P-201ENST00000410735 107 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 RNU6-592P-201ENST00000411333 103 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 RNU7-134P-201ENST00000458997 64 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 RNU6-287P-201ENST00000516230 98 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 RNA5SP470-201ENST00000516463 106 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.57□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 MIR548E-201ENST00000408287 88 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 AL158147.1-201ENST00000443970 75 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 MIR3179-1-201ENST00000578940 84 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 MIR3179-2-201ENST00000579107 84 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 MIR3179-3-201ENST00000579566 84 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 MIR3179-4-201ENST00000617599 84 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 MIR382-201ENST00000637119 76 ntBASIC-0.58□□□□□ -2.5
RPUSD3Q6P087 SNORD36A-201ENST00000362874 73 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 SNORD115-23-201ENST00000364461 82 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 RNU6-973P-201ENST00000364690 107 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 391.7 ms