Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 SNORD115-44-201ENST00000365391 82 ntBASIC1.46□□□□□ -2.18
USPL1Q5W0Q7 SNORD101-201ENST00000384027 73 ntBASIC1.46□□□□□ -2.18
USPL1Q5W0Q7 RNA5SP292-201ENST00000390974 118 ntBASIC1.46□□□□□ -2.18
USPL1Q5W0Q7 SNORD89-201ENST00000390981 114 ntBASIC1.46□□□□□ -2.18
USPL1Q5W0Q7 SNORA31.14-201ENST00000516728 116 ntBASIC1.46□□□□□ -2.18
USPL1Q5W0Q7 Y_RNA.32-201ENST00000362589 110 ntBASIC1.45□□□□□ -2.18
USPL1Q5W0Q7 SNORD114-26-201ENST00000363543 72 ntBASIC1.45□□□□□ -2.18
USPL1Q5W0Q7 RNA5SP117-201ENST00000365294 118 ntBASIC1.45□□□□□ -2.18
USPL1Q5W0Q7 MIR942-201ENST00000401111 86 ntBASIC1.45□□□□□ -2.18
USPL1Q5W0Q7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.45□□□□□ -2.18
USPL1Q5W0Q7 AC002350.1-201ENST00000490759 375 ntBASIC1.45□□□□□ -2.18
USPL1Q5W0Q7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.45□□□□□ -2.18
USPL1Q5W0Q7 MIR6779-201ENST00000617283 64 ntBASIC1.45□□□□□ -2.18
USPL1Q5W0Q7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
USPL1Q5W0Q7 MIRLET7F1-201ENST00000362202 87 ntBASIC1.44□□□□□ -2.18
USPL1Q5W0Q7 Y_RNA.244-201ENST00000364484 109 ntBASIC1.44□□□□□ -2.18
USPL1Q5W0Q7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
USPL1Q5W0Q7 RNU6-857P-201ENST00000515893 110 ntBASIC1.44□□□□□ -2.18
USPL1Q5W0Q7 RNA5SP436-201ENST00000516020 115 ntBASIC1.44□□□□□ -2.18
USPL1Q5W0Q7 MIR4696-201ENST00000581431 70 ntBASIC1.44□□□□□ -2.18
USPL1Q5W0Q7 Y_RNA.221-201ENST00000364248 96 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 RNY4P3-201ENST00000365254 95 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 MIR598-201ENST00000384868 97 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 RNU6-380P-201ENST00000410207 107 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 AL606490.4-201ENST00000423117 127 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 RNA5SP404-201ENST00000517118 132 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 MIR4712-201ENST00000583750 82 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 U6.100-201ENST00000636230 99 ntBASIC1.43□□□□□ -2.18
USPL1Q5W0Q7 Y_RNA.264-201ENST00000364665 102 ntBASIC1.42□□□□□ -2.18
USPL1Q5W0Q7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
USPL1Q5W0Q7 SNORA63.2-201ENST00000362603 126 ntBASIC1.41□□□□□ -2.18
USPL1Q5W0Q7 RNU6-935P-201ENST00000410371 100 ntBASIC1.41□□□□□ -2.18
USPL1Q5W0Q7 RNU6-469P-201ENST00000516253 101 ntBASIC1.41□□□□□ -2.18
USPL1Q5W0Q7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
USPL1Q5W0Q7 Y_RNA.94-201ENST00000363068 106 ntBASIC1.4□□□□□ -2.19
USPL1Q5W0Q7 RNA5SP403-201ENST00000363598 108 ntBASIC1.4□□□□□ -2.19
USPL1Q5W0Q7 SNORD124-201ENST00000459577 104 ntBASIC1.4□□□□□ -2.19
USPL1Q5W0Q7 MIR373-201ENST00000362273 69 ntBASIC1.39□□□□□ -2.19
USPL1Q5W0Q7 SNORD115-24-201ENST00000363528 82 ntBASIC1.39□□□□□ -2.19
USPL1Q5W0Q7 RNA5SP325-201ENST00000363756 130 ntBASIC1.39□□□□□ -2.19
USPL1Q5W0Q7 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
USPL1Q5W0Q7 RNU6-686P-201ENST00000364839 107 ntBASIC1.38□□□□□ -2.19
USPL1Q5W0Q7 MIR573-201ENST00000384964 99 ntBASIC1.38□□□□□ -2.19
USPL1Q5W0Q7 RNU7-13P-201ENST00000516413 62 ntBASIC1.38□□□□□ -2.19
USPL1Q5W0Q7 MIR4639-201ENST00000584938 69 ntBASIC1.38□□□□□ -2.19
USPL1Q5W0Q7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
USPL1Q5W0Q7 RNU6-1094P-201ENST00000362416 104 ntBASIC1.37□□□□□ -2.19
USPL1Q5W0Q7 RNU5F-1-201ENST00000362507 117 ntBASIC1.37□□□□□ -2.19
USPL1Q5W0Q7 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
USPL1Q5W0Q7 SNORD77.2-201ENST00000391045 68 ntBASIC1.37□□□□□ -2.19
USPL1Q5W0Q7 RNA5SP255-201ENST00000516370 107 ntBASIC1.37□□□□□ -2.19
USPL1Q5W0Q7 RNU6-1057P-201ENST00000517162 102 ntBASIC1.37□□□□□ -2.19
USPL1Q5W0Q7 Y_RNA.207-201ENST00000364142 106 ntBASIC1.36□□□□□ -2.19
USPL1Q5W0Q7 RNU6-1051P-201ENST00000365471 102 ntBASIC1.36□□□□□ -2.19
USPL1Q5W0Q7 MIR216B-201ENST00000390186 82 ntBASIC1.36□□□□□ -2.19
USPL1Q5W0Q7 U3.27-201ENST00000391237 200 ntBASIC1.36□□□□□ -2.19
USPL1Q5W0Q7 AL450471.1-201ENST00000447509 127 ntBASIC1.36□□□□□ -2.19
USPL1Q5W0Q7 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.36□□□□□ -2.19
USPL1Q5W0Q7 MIRLET7A1-201ENST00000362295 80 ntBASIC1.35□□□□□ -2.19
USPL1Q5W0Q7 RNU6-478P-201ENST00000363904 110 ntBASIC1.35□□□□□ -2.19
USPL1Q5W0Q7 RNU4-45P-201ENST00000365469 141 ntBASIC1.35□□□□□ -2.19
USPL1Q5W0Q7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USPL1Q5W0Q7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.35□□□□□ -2.19
USPL1Q5W0Q7 RNU7-161P-201ENST00000517289 62 ntBASIC1.34□□□□□ -2.19
USPL1Q5W0Q7 SNORD114-21-201ENST00000606412 72 ntBASIC1.34□□□□□ -2.19
USPL1Q5W0Q7 MIR4662A-201ENST00000637499 67 ntBASIC1.34□□□□□ -2.19
USPL1Q5W0Q7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
USPL1Q5W0Q7 RNU6-208P-201ENST00000362431 107 ntBASIC1.33□□□□□ -2.2
USPL1Q5W0Q7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.33□□□□□ -2.2
USPL1Q5W0Q7 RNU6-1229P-201ENST00000364295 107 ntBASIC1.33□□□□□ -2.2
USPL1Q5W0Q7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.33□□□□□ -2.2
USPL1Q5W0Q7 RNU6-287P-201ENST00000516230 98 ntBASIC1.33□□□□□ -2.2
USPL1Q5W0Q7 MIR5000-201ENST00000577717 103 ntBASIC1.33□□□□□ -2.2
USPL1Q5W0Q7 AC067863.3-201ENST00000624172 122 ntBASIC1.33□□□□□ -2.2
USPL1Q5W0Q7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
USPL1Q5W0Q7 SNORD28-201ENST00000384706 75 ntBASIC1.32□□□□□ -2.2
USPL1Q5W0Q7 RNU7-74P-201ENST00000459104 62 ntBASIC1.32□□□□□ -2.2
USPL1Q5W0Q7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.32□□□□□ -2.2
USPL1Q5W0Q7 AC211469.2-201ENST00000605461 205 ntBASIC1.32□□□□□ -2.2
USPL1Q5W0Q7 RNU6-161P-201ENST00000363051 106 ntBASIC1.31□□□□□ -2.2
USPL1Q5W0Q7 MIR451A-201ENST00000385059 72 ntBASIC1.31□□□□□ -2.2
USPL1Q5W0Q7 MIR889-201ENST00000401280 79 ntBASIC1.31□□□□□ -2.2
USPL1Q5W0Q7 MIR3612-201ENST00000579753 87 ntBASIC1.31□□□□□ -2.2
USPL1Q5W0Q7 MIR3973-201ENST00000579824 107 ntBASIC1.31□□□□□ -2.2
USPL1Q5W0Q7 MIR3920-201ENST00000581751 86 ntBASIC1.31□□□□□ -2.2
USPL1Q5W0Q7 RNU6-1126P-201ENST00000384002 107 ntBASIC1.3□□□□□ -2.2
USPL1Q5W0Q7 MIR644A-201ENST00000385262 94 ntBASIC1.3□□□□□ -2.2
USPL1Q5W0Q7 RNU7-104P-201ENST00000459398 79 ntBASIC1.3□□□□□ -2.2
USPL1Q5W0Q7 MIR1297-201ENST00000637311 77 ntBASIC1.3□□□□□ -2.2
USPL1Q5W0Q7 RNU6-776P-201ENST00000364403 104 ntBASIC1.29□□□□□ -2.2
USPL1Q5W0Q7 RNU6-1022P-201ENST00000365049 104 ntBASIC1.29□□□□□ -2.2
USPL1Q5W0Q7 MIR617-201ENST00000385030 97 ntBASIC1.29□□□□□ -2.2
USPL1Q5W0Q7 RNU6-1108P-201ENST00000516308 104 ntBASIC1.29□□□□□ -2.2
USPL1Q5W0Q7 SNORD18A-201ENST00000363753 72 ntBASIC1.28□□□□□ -2.2
USPL1Q5W0Q7 RNU6-1296P-201ENST00000383879 107 ntBASIC1.28□□□□□ -2.2
USPL1Q5W0Q7 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
USPL1Q5W0Q7 MIR2113-201ENST00000459007 91 ntBASIC1.28□□□□□ -2.2
USPL1Q5W0Q7 RNU6-807P-201ENST00000516805 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms