Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.71□□□□□ -2.3
VPS53Q5VIR6 AC022709.1-201ENST00000615967 87 ntBASIC0.71□□□□□ -2.3
VPS53Q5VIR6 U6.100-201ENST00000636230 99 ntBASIC0.71□□□□□ -2.3
VPS53Q5VIR6 SNORA36.1-201ENST00000363424 132 ntBASIC0.7□□□□□ -2.3
VPS53Q5VIR6 RNU6-294P-201ENST00000364999 102 ntBASIC0.7□□□□□ -2.3
VPS53Q5VIR6 SNORD41.1-201ENST00000391000 69 ntBASIC0.7□□□□□ -2.3
VPS53Q5VIR6 RNA5SP121-201ENST00000516537 101 ntBASIC0.7□□□□□ -2.3
VPS53Q5VIR6 MIR3920-201ENST00000581751 86 ntBASIC0.7□□□□□ -2.3
VPS53Q5VIR6 MIR4668-201ENST00000582284 70 ntBASIC0.7□□□□□ -2.3
VPS53Q5VIR6 RNU6-726P-201ENST00000364680 107 ntBASIC0.69□□□□□ -2.3
VPS53Q5VIR6 RNY1P8-201ENST00000383970 114 ntBASIC0.69□□□□□ -2.3
VPS53Q5VIR6 SNORD101-201ENST00000384027 73 ntBASIC0.69□□□□□ -2.3
VPS53Q5VIR6 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
VPS53Q5VIR6 RNU6-664P-201ENST00000362381 107 ntBASIC0.68□□□□□ -2.3
VPS53Q5VIR6 Y_RNA.558-201ENST00000384685 113 ntBASIC0.68□□□□□ -2.3
VPS53Q5VIR6 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
VPS53Q5VIR6 MIR548U-201ENST00000390728 81 ntBASIC0.68□□□□□ -2.3
VPS53Q5VIR6 Y_RNA.620-201ENST00000411009 88 ntBASIC0.68□□□□□ -2.3
VPS53Q5VIR6 RNA5SP268-201ENST00000516828 124 ntBASIC0.68□□□□□ -2.3
VPS53Q5VIR6 MIR4696-201ENST00000581431 70 ntBASIC0.68□□□□□ -2.3
VPS53Q5VIR6 RNU6-633P-201ENST00000362612 103 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 RNU6-219P-201ENST00000364728 107 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 RNU6-1134P-201ENST00000365156 101 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 RNU6-811P-201ENST00000384069 107 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 RNU6-675P-201ENST00000384236 104 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 SNORA8.2-201ENST00000384372 139 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 AC098934.3-201ENST00000430450 190 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 RNA5SP227-201ENST00000516184 113 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
VPS53Q5VIR6 RNA5SP517-201ENST00000364724 117 ntBASIC0.66□□□□□ -2.3
VPS53Q5VIR6 RNU6-1126P-201ENST00000384002 107 ntBASIC0.66□□□□□ -2.3
VPS53Q5VIR6 RNY1P4-201ENST00000384595 115 ntBASIC0.66□□□□□ -2.3
VPS53Q5VIR6 MIR548L-201ENST00000408303 86 ntBASIC0.66□□□□□ -2.3
VPS53Q5VIR6 RNU7-74P-201ENST00000459104 62 ntBASIC0.66□□□□□ -2.3
VPS53Q5VIR6 MIR3064-201ENST00000581130 66 ntBASIC0.66□□□□□ -2.3
VPS53Q5VIR6 Y_RNA.17-201ENST00000362433 111 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 RNA5SP347-201ENST00000362445 119 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 Y_RNA.207-201ENST00000364142 106 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 Y_RNA.239-201ENST00000364444 113 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 RNU6-132P-201ENST00000383863 107 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 MIR1236-201ENST00000408340 102 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 RNU6-402P-201ENST00000410678 103 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 RNU6-287P-201ENST00000516230 98 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 RNU6-229P-201ENST00000516614 102 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 AC104996.3-201ENST00000590718 94 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 AC006254.2-201ENST00000603259 279 ntBASIC0.65□□□□□ -2.31
VPS53Q5VIR6 RNU6-497P-201ENST00000365316 104 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 RNU6-716P-201ENST00000365621 103 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 MIR617-201ENST00000385030 97 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 RNU6-935P-201ENST00000410371 100 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 MIR2113-201ENST00000459007 91 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 MIR7107-201ENST00000611489 80 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 AL162376.1-201ENST00000624117 175 ntBASIC0.64□□□□□ -2.31
VPS53Q5VIR6 MIRLET7F1-201ENST00000362202 87 ntBASIC0.63□□□□□ -2.31
VPS53Q5VIR6 Y_RNA.593-201ENST00000410292 98 ntBASIC0.63□□□□□ -2.31
VPS53Q5VIR6 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
VPS53Q5VIR6 MIR548AG2-201ENST00000581228 64 ntBASIC0.63□□□□□ -2.31
VPS53Q5VIR6 RNU4-32P-201ENST00000363404 141 ntBASIC0.62□□□□□ -2.31
VPS53Q5VIR6 RNU6-509P-201ENST00000363519 107 ntBASIC0.62□□□□□ -2.31
VPS53Q5VIR6 SNORD118-201ENST00000363593 134 ntBASIC0.62□□□□□ -2.31
VPS53Q5VIR6 Y_RNA.491-201ENST00000384417 107 ntBASIC0.62□□□□□ -2.31
VPS53Q5VIR6 MIR489-201ENST00000384923 84 ntBASIC0.62□□□□□ -2.31
VPS53Q5VIR6 MIR519C-201ENST00000385053 87 ntBASIC0.62□□□□□ -2.31
VPS53Q5VIR6 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
VPS53Q5VIR6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.62□□□□□ -2.31
VPS53Q5VIR6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
VPS53Q5VIR6 MIR598-201ENST00000384868 97 ntBASIC0.61□□□□□ -2.31
VPS53Q5VIR6 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
VPS53Q5VIR6 RN7SKP12-201ENST00000516275 143 ntBASIC0.61□□□□□ -2.31
VPS53Q5VIR6 MIR6513-201ENST00000621188 64 ntBASIC0.61□□□□□ -2.31
VPS53Q5VIR6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
VPS53Q5VIR6 SNORD115-27-201ENST00000364430 82 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 MIR450A2-201ENST00000385022 100 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 MIR518A1-201ENST00000385068 85 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 MIR216B-201ENST00000390186 82 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 RNA5SP292-201ENST00000390974 118 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
VPS53Q5VIR6 SNORA18.5-201ENST00000516616 101 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 RNU6-267P-201ENST00000516714 103 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 RNU6-1057P-201ENST00000517162 102 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
VPS53Q5VIR6 MIR519E-201ENST00000385075 84 ntBASIC0.59□□□□□ -2.31
VPS53Q5VIR6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.59□□□□□ -2.31
VPS53Q5VIR6 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
VPS53Q5VIR6 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.59□□□□□ -2.31
VPS53Q5VIR6 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
VPS53Q5VIR6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
VPS53Q5VIR6 RNU6-269P-201ENST00000391077 97 ntBASIC0.58□□□□□ -2.32
VPS53Q5VIR6 U3.27-201ENST00000391237 200 ntBASIC0.58□□□□□ -2.32
VPS53Q5VIR6 RNA5SP193-201ENST00000410353 107 ntBASIC0.58□□□□□ -2.32
VPS53Q5VIR6 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
VPS53Q5VIR6 IGLL4P-201ENST00000614590 133 ntBASIC0.58□□□□□ -2.32
VPS53Q5VIR6 MIR7111-201ENST00000619751 72 ntBASIC0.58□□□□□ -2.32
VPS53Q5VIR6 AC073869.9-201ENST00000641610 120 ntBASIC0.58□□□□□ -2.32
VPS53Q5VIR6 SNORD115-37-201ENST00000363768 82 ntBASIC0.57□□□□□ -2.32
VPS53Q5VIR6 RNY1P1-201ENST00000364372 112 ntBASIC0.57□□□□□ -2.32
VPS53Q5VIR6 RNU6-820P-201ENST00000384273 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 300.2 ms