Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 RNU6-844P-201ENST00000517175 102 ntBASIC0.73□□□□□ -2.29
ATP2B3Q16720 MIR4536-1-201ENST00000583537 88 ntBASIC0.73□□□□□ -2.29
ATP2B3Q16720 MIR7107-201ENST00000611489 80 ntBASIC0.73□□□□□ -2.29
ATP2B3Q16720 RNU4-32P-201ENST00000363404 141 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 RNA5SP499-201ENST00000363982 119 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 MIR548L-201ENST00000408303 86 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 RNA5SP227-201ENST00000516184 113 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 RNU6-65P-201ENST00000516332 98 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 RNU7-13P-201ENST00000516413 62 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 Y_RNA.694-201ENST00000516677 117 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 RNU6-267P-201ENST00000516714 103 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 MIR548AG2-201ENST00000581228 64 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 MIR3920-201ENST00000581751 86 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 AC067863.3-201ENST00000624172 122 ntBASIC0.72□□□□□ -2.29
ATP2B3Q16720 SNORD115-27-201ENST00000364430 82 ntBASIC0.71□□□□□ -2.3
ATP2B3Q16720 RNU6-726P-201ENST00000364680 107 ntBASIC0.71□□□□□ -2.3
ATP2B3Q16720 AC092634.7-201ENST00000621022 103 ntBASIC0.71□□□□□ -2.3
ATP2B3Q16720 RNU6-945P-201ENST00000383947 107 ntBASIC0.7□□□□□ -2.3
ATP2B3Q16720 RNA5SP292-201ENST00000390974 118 ntBASIC0.7□□□□□ -2.3
ATP2B3Q16720 RNU6-402P-201ENST00000410678 103 ntBASIC0.7□□□□□ -2.3
ATP2B3Q16720 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.7□□□□□ -2.3
ATP2B3Q16720 MIR4696-201ENST00000581431 70 ntBASIC0.7□□□□□ -2.3
ATP2B3Q16720 MIR6828-201ENST00000636181 60 ntBASIC0.7□□□□□ -2.3
ATP2B3Q16720 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
ATP2B3Q16720 RNU6-1134P-201ENST00000365156 101 ntBASIC0.69□□□□□ -2.3
ATP2B3Q16720 Y_RNA.596-201ENST00000410462 109 ntBASIC0.69□□□□□ -2.3
ATP2B3Q16720 RNU6-287P-201ENST00000516230 98 ntBASIC0.69□□□□□ -2.3
ATP2B3Q16720 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
ATP2B3Q16720 MIR4752-201ENST00000579672 72 ntBASIC0.69□□□□□ -2.3
ATP2B3Q16720 MIR4668-201ENST00000582284 70 ntBASIC0.69□□□□□ -2.3
ATP2B3Q16720 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.69□□□□□ -2.3
ATP2B3Q16720 RNU6-664P-201ENST00000362381 107 ntBASIC0.68□□□□□ -2.3
ATP2B3Q16720 Y_RNA.207-201ENST00000364142 106 ntBASIC0.68□□□□□ -2.3
ATP2B3Q16720 SNORD101-201ENST00000384027 73 ntBASIC0.68□□□□□ -2.3
ATP2B3Q16720 Y_RNA.540-201ENST00000384638 111 ntBASIC0.68□□□□□ -2.3
ATP2B3Q16720 AC098934.3-201ENST00000430450 190 ntBASIC0.68□□□□□ -2.3
ATP2B3Q16720 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.68□□□□□ -2.3
ATP2B3Q16720 RNU6-1126P-201ENST00000384002 107 ntBASIC0.67□□□□□ -2.3
ATP2B3Q16720 Y_RNA.593-201ENST00000410292 98 ntBASIC0.67□□□□□ -2.3
ATP2B3Q16720 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
ATP2B3Q16720 RNU6-1255P-201ENST00000363434 112 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 RNU6-219P-201ENST00000364728 107 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 RNU6-294P-201ENST00000364999 102 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 SNORD41.1-201ENST00000391000 69 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 RNU6-269P-201ENST00000391077 97 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 SNORD90-201ENST00000391145 111 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
ATP2B3Q16720 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 AC069271.1-201ENST00000445577 156 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 AL157398.1-201ENST00000452981 186 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 MIR2113-201ENST00000459007 91 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 MIR3064-201ENST00000581130 66 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 MTRNR2L2-201ENST00000604882 87 ntBASIC0.66□□□□□ -2.3
ATP2B3Q16720 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.3
ATP2B3Q16720 Y_RNA.17-201ENST00000362433 111 ntBASIC0.65□□□□□ -2.31
ATP2B3Q16720 RNU6-811P-201ENST00000384069 107 ntBASIC0.65□□□□□ -2.31
ATP2B3Q16720 Y_RNA.620-201ENST00000411009 88 ntBASIC0.65□□□□□ -2.31
ATP2B3Q16720 RNU7-153P-201ENST00000516455 62 ntBASIC0.65□□□□□ -2.31
ATP2B3Q16720 Y_RNA.369-201ENST00000365568 117 ntBASIC0.64□□□□□ -2.31
ATP2B3Q16720 SNORD116-22-201ENST00000384430 92 ntBASIC0.64□□□□□ -2.31
ATP2B3Q16720 SNORA40.8-201ENST00000411034 126 ntBASIC0.64□□□□□ -2.31
ATP2B3Q16720 AC104996.3-201ENST00000590718 94 ntBASIC0.64□□□□□ -2.31
ATP2B3Q16720 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
ATP2B3Q16720 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
ATP2B3Q16720 Y_RNA.73-201ENST00000362910 113 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 MIR518A1-201ENST00000385068 85 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 MIR519E-201ENST00000385075 84 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 RNA5SP193-201ENST00000410353 107 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 SNORA68.3-201ENST00000515906 83 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 RNU6-762P-201ENST00000517107 102 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.63□□□□□ -2.31
ATP2B3Q16720 Y_RNA.43-201ENST00000362670 111 ntBASIC0.62□□□□□ -2.31
ATP2B3Q16720 RNU6-1052P-201ENST00000411398 104 ntBASIC0.62□□□□□ -2.31
ATP2B3Q16720 SNORA18.5-201ENST00000516616 101 ntBASIC0.62□□□□□ -2.31
ATP2B3Q16720 RNU6-719P-201ENST00000516671 104 ntBASIC0.62□□□□□ -2.31
ATP2B3Q16720 AL162376.1-201ENST00000624117 175 ntBASIC0.62□□□□□ -2.31
ATP2B3Q16720 Y_RNA.239-201ENST00000364444 113 ntBASIC0.61□□□□□ -2.31
ATP2B3Q16720 Y_RNA.491-201ENST00000384417 107 ntBASIC0.61□□□□□ -2.31
ATP2B3Q16720 RN7SKP12-201ENST00000516275 143 ntBASIC0.61□□□□□ -2.31
ATP2B3Q16720 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
ATP2B3Q16720 MIR494-201ENST00000349529 81 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 SNORD115-44-201ENST00000365391 82 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 MIR451A-201ENST00000385059 72 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 SNORD71-201ENST00000411292 86 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
ATP2B3Q16720 RNA5SP484-201ENST00000458857 111 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 MIR3140-201ENST00000583685 90 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 RNU1-29P-201ENST00000606574 126 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 SNORA70.25-201ENST00000612741 95 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.6□□□□□ -2.31
ATP2B3Q16720 RNU6-633P-201ENST00000362612 103 ntBASIC0.59□□□□□ -2.31
ATP2B3Q16720 MIR617-201ENST00000385030 97 ntBASIC0.59□□□□□ -2.31
ATP2B3Q16720 MIR216A-201ENST00000385063 110 ntBASIC0.59□□□□□ -2.31
ATP2B3Q16720 MIR548U-201ENST00000390728 81 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms