Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 MIR519C-201ENST00000385053 87 ntBASIC0.91□□□□□ -2.26
SF3B3Q15393 AC022137.1-201ENST00000483735 151 ntBASIC0.91□□□□□ -2.26
SF3B3Q15393 RNU6-135P-201ENST00000516769 101 ntBASIC0.91□□□□□ -2.26
SF3B3Q15393 MTRNR2L2-201ENST00000604882 87 ntBASIC0.91□□□□□ -2.26
SF3B3Q15393 MIR548BB-201ENST00000626714 66 ntBASIC0.91□□□□□ -2.26
SF3B3Q15393 U6.100-201ENST00000636230 99 ntBASIC0.91□□□□□ -2.26
SF3B3Q15393 Y_RNA.36-201ENST00000362602 112 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 RNU4-32P-201ENST00000363404 141 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 RNA5SP403-201ENST00000363598 108 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 RNU6-132P-201ENST00000383863 107 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 RNU6-592P-201ENST00000411333 103 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 AC244098.3-201ENST00000424803 96 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 RNU7-161P-201ENST00000517289 62 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 MIR5588-201ENST00000581890 63 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.9□□□□□ -2.27
SF3B3Q15393 MIR6779-201ENST00000617283 64 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.27
SF3B3Q15393 SNORD115-24-201ENST00000363528 82 ntBASIC0.89□□□□□ -2.27
SF3B3Q15393 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
SF3B3Q15393 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SF3B3Q15393 MIR1236-201ENST00000408340 102 ntBASIC0.89□□□□□ -2.27
SF3B3Q15393 Y_RNA.611-201ENST00000410682 108 ntBASIC0.89□□□□□ -2.27
SF3B3Q15393 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.89□□□□□ -2.27
SF3B3Q15393 AC011195.1-201ENST00000578177 177 ntBASIC0.89□□□□□ -2.27
SF3B3Q15393 MIR3064-201ENST00000581130 66 ntBASIC0.89□□□□□ -2.27
SF3B3Q15393 AC006160.2-201ENST00000637708 154 ntBASIC0.89□□□□□ -2.27
SF3B3Q15393 MIR6866-201ENST00000638146 69 ntBASIC0.89□□□□□ -2.27
SF3B3Q15393 SNORD18A-201ENST00000363753 72 ntBASIC0.88□□□□□ -2.27
SF3B3Q15393 RNA5SP173-201ENST00000364857 136 ntBASIC0.88□□□□□ -2.27
SF3B3Q15393 RNU6-811P-201ENST00000384069 107 ntBASIC0.88□□□□□ -2.27
SF3B3Q15393 Y_RNA.596-201ENST00000410462 109 ntBASIC0.88□□□□□ -2.27
SF3B3Q15393 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
SF3B3Q15393 AC104996.3-201ENST00000590718 94 ntBASIC0.88□□□□□ -2.27
SF3B3Q15393 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
SF3B3Q15393 MIRLET7F1-201ENST00000362202 87 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 SNORD28-201ENST00000384706 75 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 RNA5SP292-201ENST00000390974 118 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 RNU7-171P-201ENST00000459581 62 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 RNU6-469P-201ENST00000516253 101 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 RNU7-153P-201ENST00000516455 62 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 MIR3678-201ENST00000578455 94 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 MIR4696-201ENST00000581431 70 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 RN7SL793P-201ENST00000583259 296 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 MIR4639-201ENST00000584938 69 ntBASIC0.87□□□□□ -2.27
SF3B3Q15393 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.87□□□□□ -2.27
SF3B3Q15393 MIR18A-201ENST00000362310 71 ntBASIC0.86□□□□□ -2.27
SF3B3Q15393 RNU6-664P-201ENST00000362381 107 ntBASIC0.86□□□□□ -2.27
SF3B3Q15393 SNORD101-201ENST00000384027 73 ntBASIC0.86□□□□□ -2.27
SF3B3Q15393 MIR548U-201ENST00000390728 81 ntBASIC0.86□□□□□ -2.27
SF3B3Q15393 AC093729.1-201ENST00000513074 128 ntBASIC0.86□□□□□ -2.27
SF3B3Q15393 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.86□□□□□ -2.27
SF3B3Q15393 RNU6-1276P-201ENST00000365372 104 ntBASIC0.85□□□□□ -2.27
SF3B3Q15393 RNU6-573P-201ENST00000383938 106 ntBASIC0.85□□□□□ -2.27
SF3B3Q15393 Y_RNA.426-201ENST00000384068 113 ntBASIC0.85□□□□□ -2.27
SF3B3Q15393 RNU6-242P-201ENST00000384359 107 ntBASIC0.85□□□□□ -2.27
SF3B3Q15393 MIR936-201ENST00000401264 98 ntBASIC0.85□□□□□ -2.27
SF3B3Q15393 SNORA18.5-201ENST00000516616 101 ntBASIC0.85□□□□□ -2.27
SF3B3Q15393 RNA5SP47-201ENST00000517230 109 ntBASIC0.85□□□□□ -2.27
SF3B3Q15393 AC244669.1-204ENST00000621564 178 ntBASIC0.85□□□□□ -2.27
SF3B3Q15393 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
SF3B3Q15393 Y_RNA.491-201ENST00000384417 107 ntBASIC0.84□□□□□ -2.27
SF3B3Q15393 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
SF3B3Q15393 MIR4796-201ENST00000580742 81 ntBASIC0.84□□□□□ -2.27
SF3B3Q15393 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
SF3B3Q15393 SNORD115-37-201ENST00000363768 82 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 Y_RNA.207-201ENST00000364142 106 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 Y_RNA.239-201ENST00000364444 113 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 SNORD115-44-201ENST00000365391 82 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 MIR216A-201ENST00000385063 110 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SF3B3Q15393 Y_RNA.607-201ENST00000410597 98 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 RNU7-104P-201ENST00000459398 79 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 RNU7-13P-201ENST00000516413 62 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 AC140658.3-201ENST00000567603 271 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 MIR3920-201ENST00000581751 86 ntBASIC0.83□□□□□ -2.28
SF3B3Q15393 RNU6-1229P-201ENST00000364295 107 ntBASIC0.82□□□□□ -2.28
SF3B3Q15393 RNA5SP193-201ENST00000410353 107 ntBASIC0.82□□□□□ -2.28
SF3B3Q15393 RNU6-287P-201ENST00000516230 98 ntBASIC0.82□□□□□ -2.28
SF3B3Q15393 SNORA25.13-201ENST00000516395 103 ntBASIC0.82□□□□□ -2.28
SF3B3Q15393 AC067863.3-201ENST00000624172 122 ntBASIC0.82□□□□□ -2.28
SF3B3Q15393 RNU6-787P-201ENST00000384032 107 ntBASIC0.81□□□□□ -2.28
SF3B3Q15393 SCARNA16.5-201ENST00000517114 183 ntBASIC0.81□□□□□ -2.28
SF3B3Q15393 MIR4666B-201ENST00000578142 81 ntBASIC0.81□□□□□ -2.28
SF3B3Q15393 MIR548AG2-201ENST00000581228 64 ntBASIC0.81□□□□□ -2.28
SF3B3Q15393 Y_RNA.219-201ENST00000364232 113 ntBASIC0.8□□□□□ -2.28
SF3B3Q15393 RNU6-1126P-201ENST00000384002 107 ntBASIC0.8□□□□□ -2.28
SF3B3Q15393 RNU6-935P-201ENST00000410371 100 ntBASIC0.8□□□□□ -2.28
SF3B3Q15393 RNA5SP222-201ENST00000411039 105 ntBASIC0.8□□□□□ -2.28
SF3B3Q15393 MIR6828-201ENST00000636181 60 ntBASIC0.8□□□□□ -2.28
SF3B3Q15393 Y_RNA.205-201ENST00000364128 113 ntBASIC0.79□□□□□ -2.28
SF3B3Q15393 RNU6-726P-201ENST00000364680 107 ntBASIC0.79□□□□□ -2.28
SF3B3Q15393 SNORD41.1-201ENST00000391000 69 ntBASIC0.79□□□□□ -2.28
SF3B3Q15393 SNORD90-201ENST00000391145 111 ntBASIC0.79□□□□□ -2.28
SF3B3Q15393 MIR2113-201ENST00000459007 91 ntBASIC0.79□□□□□ -2.28
SF3B3Q15393 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.79□□□□□ -2.28
SF3B3Q15393 MIR1245B-201ENST00000636115 69 ntBASIC0.79□□□□□ -2.28
SF3B3Q15393 RNU6-624P-201ENST00000363411 107 ntBASIC0.78□□□□□ -2.28
SF3B3Q15393 SNORA36.1-201ENST00000363424 132 ntBASIC0.78□□□□□ -2.28
SF3B3Q15393 RNA5SP94-201ENST00000516917 108 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 349 ms