Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SNORD50.2-201ENST00000365465 70 ntBASIC-4.8□□□□□ -3.18
TFF3Q07654 SNORD37.1-201ENST00000390968 65 ntBASIC-4.8□□□□□ -3.18
TFF3Q07654 RNA5SP401-201ENST00000515920 127 ntBASIC-4.8□□□□□ -3.18
TFF3Q07654 RNU6-1313P-201ENST00000362622 102 ntBASIC-4.81□□□□□ -3.18
TFF3Q07654 RNU6-665P-201ENST00000384639 107 ntBASIC-4.81□□□□□ -3.18
TFF3Q07654 SNORD5.1-201ENST00000458800 75 ntBASIC-4.81□□□□□ -3.18
TFF3Q07654 RNU7-85P-201ENST00000458851 63 ntBASIC-4.81□□□□□ -3.18
TFF3Q07654 RNA5SP236-201ENST00000516169 116 ntBASIC-4.81□□□□□ -3.18
TFF3Q07654 AC104996.3-201ENST00000590718 94 ntBASIC-4.81□□□□□ -3.18
TFF3Q07654 RNU6-800P-201ENST00000384473 103 ntBASIC-4.82□□□□□ -3.18
TFF3Q07654 MIR514A2-201ENST00000385131 88 ntBASIC-4.82□□□□□ -3.18
TFF3Q07654 MIR514A3-201ENST00000385132 88 ntBASIC-4.82□□□□□ -3.18
TFF3Q07654 MT-TH-201ENST00000387441 69 ntBASIC-4.82□□□□□ -3.18
TFF3Q07654 AC083904.1-201ENST00000487828 231 ntBASIC-4.82□□□□□ -3.18
TFF3Q07654 RNU6-656P-201ENST00000516785 107 ntBASIC-4.82□□□□□ -3.18
TFF3Q07654 AC006006.1-201ENST00000603082 144 ntBASIC-4.82□□□□□ -3.18
TFF3Q07654 MTRNR2L9-201ENST00000622562 75 ntBASIC-4.82□□□□□ -3.18
TFF3Q07654 SNORD60-201ENST00000383903 83 ntBASIC-4.83□□□□□ -3.18
TFF3Q07654 MIR548N-201ENST00000408742 75 ntBASIC-4.83□□□□□ -3.18
TFF3Q07654 RNU6-764P-201ENST00000516396 105 ntBASIC-4.83□□□□□ -3.18
TFF3Q07654 SNORA18.6-201ENST00000516792 115 ntBASIC-4.83□□□□□ -3.18
TFF3Q07654 RNU7-110P-201ENST00000516891 62 ntBASIC-4.83□□□□□ -3.18
TFF3Q07654 Y_RNA.592-201ENST00000410274 109 ntBASIC-4.84□□□□□ -3.18
TFF3Q07654 MIR2053-201ENST00000459295 91 ntBASIC-4.84□□□□□ -3.18
TFF3Q07654 MIR1244-1-201ENST00000612829 85 ntBASIC-4.84□□□□□ -3.18
TFF3Q07654 MIR1244-3-201ENST00000635744 85 ntBASIC-4.84□□□□□ -3.18
TFF3Q07654 MIR1244-2-201ENST00000636449 85 ntBASIC-4.84□□□□□ -3.18
TFF3Q07654 MIR1244-4-202ENST00000636813 85 ntBASIC-4.84□□□□□ -3.18
TFF3Q07654 RNU6-1158P-201ENST00000391167 107 ntBASIC-4.85□□□□□ -3.19
TFF3Q07654 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-4.85□□□□□ -3.19
TFF3Q07654 RNU6-240P-201ENST00000516098 97 ntBASIC-4.85□□□□□ -3.19
TFF3Q07654 Y_RNA.24-201ENST00000362508 103 ntBASIC-4.86□□□□□ -3.19
TFF3Q07654 RNY4P13-201ENST00000384284 96 ntBASIC-4.86□□□□□ -3.19
TFF3Q07654 Y_RNA.467-201ENST00000384297 102 ntBASIC-4.86□□□□□ -3.19
TFF3Q07654 RNU6-1081P-201ENST00000384537 107 ntBASIC-4.86□□□□□ -3.19
TFF3Q07654 RNU6-1156P-201ENST00000410365 100 ntBASIC-4.86□□□□□ -3.19
TFF3Q07654 RNU6-507P-201ENST00000516045 100 ntBASIC-4.86□□□□□ -3.19
TFF3Q07654 C8orf59P2-201ENST00000603441 271 ntBASIC-4.86□□□□□ -3.19
TFF3Q07654 Y_RNA.176-201ENST00000363815 109 ntBASIC-4.87□□□□□ -3.19
TFF3Q07654 SNORA69.1-201ENST00000390904 137 ntBASIC-4.87□□□□□ -3.19
TFF3Q07654 MTATP6P29-201ENST00000415057 132 ntBASIC-4.87□□□□□ -3.19
TFF3Q07654 Y_RNA.395-201ENST00000383945 109 ntBASIC-4.88□□□□□ -3.19
TFF3Q07654 RNU6-106P-201ENST00000384405 107 ntBASIC-4.88□□□□□ -3.19
TFF3Q07654 RNU6-752P-201ENST00000516376 102 ntBASIC-4.88□□□□□ -3.19
TFF3Q07654 U6.81-201ENST00000612550 106 ntBASIC-4.88□□□□□ -3.19
TFF3Q07654 RNU5F-7P-201ENST00000363696 115 ntBASIC-4.89□□□□□ -3.19
TFF3Q07654 Y_RNA.424-201ENST00000384063 103 ntBASIC-4.89□□□□□ -3.19
TFF3Q07654 RNU6-587P-201ENST00000391282 106 ntBASIC-4.89□□□□□ -3.19
TFF3Q07654 Y_RNA.773-201ENST00000607168 90 ntBASIC-4.89□□□□□ -3.19
TFF3Q07654 MIR379-201ENST00000362218 67 ntBASIC-4.9□□□□□ -3.19
TFF3Q07654 SNORA75-201ENST00000384158 137 ntBASIC-4.9□□□□□ -3.19
TFF3Q07654 RNU6-256P-201ENST00000516747 97 ntBASIC-4.9□□□□□ -3.19
TFF3Q07654 ZNF519P2-201ENST00000557032 169 ntBASIC-4.9□□□□□ -3.19
TFF3Q07654 AL512310.12-203ENST00000640543 90 ntBASIC-4.9□□□□□ -3.19
TFF3Q07654 Y_RNA.158-201ENST00000363651 101 ntBASIC-4.91□□□□□ -3.2
TFF3Q07654 MT-TT-201ENST00000387460 66 ntBASIC-4.91□□□□□ -3.2
TFF3Q07654 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-4.91□□□□□ -3.2
TFF3Q07654 RNU6-1272P-201ENST00000362776 107 ntBASIC-4.92□□□□□ -3.2
TFF3Q07654 RNU7-174P-201ENST00000516248 59 ntBASIC-4.92□□□□□ -3.2
TFF3Q07654 SNORD63.2-201ENST00000516303 64 ntBASIC-4.92□□□□□ -3.2
TFF3Q07654 MIR3672-201ENST00000584290 82 ntBASIC-4.92□□□□□ -3.2
TFF3Q07654 RNU5F-1-201ENST00000362507 117 ntBASIC-4.93□□□□□ -3.2
TFF3Q07654 Y_RNA.321-201ENST00000365149 102 ntBASIC-4.93□□□□□ -3.2
TFF3Q07654 RNU6-669P-201ENST00000365575 107 ntBASIC-4.93□□□□□ -3.2
TFF3Q07654 Y_RNA.409-201ENST00000383990 98 ntBASIC-4.93□□□□□ -3.2
TFF3Q07654 RNU4-43P-201ENST00000410628 137 ntBASIC-4.93□□□□□ -3.2
TFF3Q07654 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-4.93□□□□□ -3.2
TFF3Q07654 MTND1P1-201ENST00000445453 368 ntBASIC-4.93□□□□□ -3.2
TFF3Q07654 AC025521.1-201ENST00000621624 286 ntBASIC-4.93□□□□□ -3.2
TFF3Q07654 RNU6-309P-201ENST00000364573 106 ntBASIC-4.94□□□□□ -3.2
TFF3Q07654 SNORD90-201ENST00000391145 111 ntBASIC-4.94□□□□□ -3.2
TFF3Q07654 Y_RNA.217-201ENST00000364214 105 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 Y_RNA.325-201ENST00000365171 122 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 Y_RNA.526-201ENST00000384572 110 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 RNU6-310P-201ENST00000384655 107 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 Y_RNA.641-201ENST00000459414 105 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 RNU6-523P-201ENST00000516304 54 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 RNU6-1018P-201ENST00000516577 106 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 MIR3144-201ENST00000579460 79 ntBASIC-4.95□□□□□ -3.2
TFF3Q07654 RNU6-1252P-201ENST00000363054 104 ntBASIC-4.96□□□□□ -3.2
TFF3Q07654 RNU6-151P-201ENST00000364158 107 ntBASIC-4.96□□□□□ -3.2
TFF3Q07654 AL731563.1-201ENST00000442202 214 ntBASIC-4.96□□□□□ -3.2
TFF3Q07654 MTND3P12-201ENST00000559068 328 ntBASIC-4.96□□□□□ -3.2
TFF3Q07654 DLEU2_3.2-201ENST00000612883 73 ntBASIC-4.96□□□□□ -3.2
TFF3Q07654 UBE2WP1-201ENST00000362030 340 ntBASIC-4.97□□□□□ -3.21
TFF3Q07654 RNU6-500P-201ENST00000362349 107 ntBASIC-4.97□□□□□ -3.21
TFF3Q07654 Y_RNA.418-201ENST00000384029 102 ntBASIC-4.97□□□□□ -3.21
TFF3Q07654 SNORD63-201ENST00000384262 68 ntBASIC-4.97□□□□□ -3.21
TFF3Q07654 MIR548I1-201ENST00000408810 149 ntBASIC-4.97□□□□□ -3.21
TFF3Q07654 AC097520.1-201ENST00000624435 385 ntBASIC-4.97□□□□□ -3.21
TFF3Q07654 RNU6-912P-201ENST00000363800 104 ntBASIC-4.98□□□□□ -3.21
TFF3Q07654 RNU6-530P-201ENST00000391180 107 ntBASIC-4.98□□□□□ -3.21
TFF3Q07654 AC009161.1-201ENST00000417306 376 ntBASIC-4.98□□□□□ -3.21
TFF3Q07654 AL157392.4-201ENST00000609756 345 ntBASIC-4.98□□□□□ -3.21
TFF3Q07654 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.98□□□□□ -3.21
TFF3Q07654 Y_RNA.401-201ENST00000383965 117 ntBASIC-4.99□□□□□ -3.21
TFF3Q07654 RNU6-1113P-201ENST00000384348 107 ntBASIC-4.99□□□□□ -3.21
TFF3Q07654 MIR616-201ENST00000385293 97 ntBASIC-4.99□□□□□ -3.21
TFF3Q07654 RNU7-66P-201ENST00000459469 62 ntBASIC-4.99□□□□□ -3.21
Retrieved 100 of 98,524 protein–RNA pairs in 260.2 ms