Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 Y_RNA.467-201ENST00000384297 102 ntBASIC0.38□□□□□ -2.35
HDAC4P56524 RNU6-1081P-201ENST00000384537 107 ntBASIC0.38□□□□□ -2.35
HDAC4P56524 RNU2-59P-201ENST00000410482 191 ntBASIC0.38□□□□□ -2.35
HDAC4P56524 Y_RNA.601-201ENST00000410500 113 ntBASIC0.38□□□□□ -2.35
HDAC4P56524 RNU6-795P-201ENST00000516323 103 ntBASIC0.38□□□□□ -2.35
HDAC4P56524 AC025521.1-201ENST00000621624 286 ntBASIC0.38□□□□□ -2.35
HDAC4P56524 RNU6-957P-201ENST00000363652 99 ntBASIC0.37□□□□□ -2.35
HDAC4P56524 MIR590-201ENST00000385008 97 ntBASIC0.37□□□□□ -2.35
HDAC4P56524 RNU6-269P-201ENST00000391077 97 ntBASIC0.37□□□□□ -2.35
HDAC4P56524 RNU6-243P-201ENST00000391140 107 ntBASIC0.37□□□□□ -2.35
HDAC4P56524 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.37□□□□□ -2.35
HDAC4P56524 MIR548AG2-201ENST00000581228 64 ntBASIC0.37□□□□□ -2.35
HDAC4P56524 AL627230.5-201ENST00000619807 58 ntBASIC0.37□□□□□ -2.35
HDAC4P56524 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
HDAC4P56524 SNORD45B-201ENST00000364617 72 ntBASIC0.36□□□□□ -2.35
HDAC4P56524 Y_RNA.291-201ENST00000364886 113 ntBASIC0.36□□□□□ -2.35
HDAC4P56524 MIR4439-201ENST00000583746 80 ntBASIC0.36□□□□□ -2.35
HDAC4P56524 TRDV1-202ENST00000621643 102 ntBASIC0.36□□□□□ -2.35
HDAC4P56524 U6.100-201ENST00000636230 99 ntBASIC0.36□□□□□ -2.35
HDAC4P56524 RNU6-1125P-201ENST00000363601 107 ntBASIC0.35□□□□□ -2.35
HDAC4P56524 RNU4-36P-201ENST00000364294 144 ntBASIC0.35□□□□□ -2.35
HDAC4P56524 RNU6-480P-201ENST00000384332 107 ntBASIC0.35□□□□□ -2.35
HDAC4P56524 MIR548L-201ENST00000408303 86 ntBASIC0.35□□□□□ -2.35
HDAC4P56524 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.35□□□□□ -2.35
HDAC4P56524 snoU13.11-201ENST00000459219 104 ntBASIC0.35□□□□□ -2.35
HDAC4P56524 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
HDAC4P56524 MIR6759-201ENST00000638110 65 ntBASIC0.35□□□□□ -2.35
HDAC4P56524 RNU6-215P-201ENST00000365169 102 ntBASIC0.34□□□□□ -2.36
HDAC4P56524 MIR1302-5-201ENST00000408164 150 ntBASIC0.34□□□□□ -2.36
HDAC4P56524 SCARNA23-201ENST00000516060 130 ntBASIC0.34□□□□□ -2.36
HDAC4P56524 RNU6-1232P-201ENST00000516299 86 ntBASIC0.34□□□□□ -2.36
HDAC4P56524 AL513043.2-201ENST00000573941 143 ntBASIC0.34□□□□□ -2.36
HDAC4P56524 SNORA70.25-201ENST00000612741 95 ntBASIC0.34□□□□□ -2.36
HDAC4P56524 Y_RNA.10-201ENST00000362371 110 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 RNU6-815P-201ENST00000384080 113 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 SNORD20-201ENST00000384550 80 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 RNU6-813P-201ENST00000384691 107 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 RNA5SP299-201ENST00000391203 116 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 RNU6-109P-201ENST00000516364 107 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 RNU7-13P-201ENST00000516413 62 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 RNU6-184P-201ENST00000516514 107 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 MTRNR2L2-201ENST00000604882 87 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 AC103810.7-201ENST00000607821 91 ntBASIC0.33□□□□□ -2.36
HDAC4P56524 Y_RNA.423-201ENST00000384057 113 ntBASIC0.32□□□□□ -2.36
HDAC4P56524 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.32□□□□□ -2.36
HDAC4P56524 Y_RNA.283-201ENST00000364798 112 ntBASIC0.31□□□□□ -2.36
HDAC4P56524 SNORA51.5-201ENST00000384126 131 ntBASIC0.31□□□□□ -2.36
HDAC4P56524 RNU6-75P-201ENST00000515944 104 ntBASIC0.31□□□□□ -2.36
HDAC4P56524 RNU6-755P-201ENST00000364400 103 ntBASIC0.3□□□□□ -2.36
HDAC4P56524 RNU6-756P-201ENST00000383997 107 ntBASIC0.3□□□□□ -2.36
HDAC4P56524 RNU7-85P-201ENST00000458851 63 ntBASIC0.3□□□□□ -2.36
HDAC4P56524 Y_RNA.648-201ENST00000459455 110 ntBASIC0.3□□□□□ -2.36
HDAC4P56524 RNU6-766P-201ENST00000362478 107 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 MIR519E-201ENST00000385075 84 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 RNA5SP484-201ENST00000458857 111 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 RNU6-287P-201ENST00000516230 98 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 MIR4636-201ENST00000582271 80 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.29□□□□□ -2.36
HDAC4P56524 RNU6-644P-201ENST00000391155 98 ntBASIC0.28□□□□□ -2.36
HDAC4P56524 AC073261.1-201ENST00000429409 121 ntBASIC0.28□□□□□ -2.36
HDAC4P56524 AC093423.1-201ENST00000440817 142 ntBASIC0.28□□□□□ -2.36
HDAC4P56524 MIR2113-201ENST00000459007 91 ntBASIC0.28□□□□□ -2.36
HDAC4P56524 AC069113.3-201ENST00000521019 150 ntBASIC0.28□□□□□ -2.36
HDAC4P56524 MIR548AI-201ENST00000579940 88 ntBASIC0.28□□□□□ -2.36
HDAC4P56524 MIR450A1-201ENST00000362262 91 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 SNORA63.4-201ENST00000362763 126 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 Y_RNA.207-201ENST00000364142 106 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 SNORD115-44-201ENST00000365391 82 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 MIR617-201ENST00000385030 97 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 RNU6-466P-201ENST00000391224 103 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 Y_RNA.596-201ENST00000410462 109 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 MIR5589-201ENST00000579442 60 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 MIR4696-201ENST00000581431 70 ntBASIC0.27□□□□□ -2.37
HDAC4P56524 MIR760-201ENST00000390220 80 ntBASIC0.26□□□□□ -2.37
HDAC4P56524 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
HDAC4P56524 Y_RNA.818-201ENST00000618813 71 ntBASIC0.26□□□□□ -2.37
HDAC4P56524 SNORA2A-201ENST00000383885 135 ntBASIC0.25□□□□□ -2.37
HDAC4P56524 RNU6-1113P-201ENST00000384348 107 ntBASIC0.25□□□□□ -2.37
HDAC4P56524 RNU7-61P-201ENST00000515897 61 ntBASIC0.25□□□□□ -2.37
HDAC4P56524 RNU6-919P-201ENST00000516731 104 ntBASIC0.25□□□□□ -2.37
HDAC4P56524 NAMPTP3-201ENST00000569273 224 ntBASIC0.25□□□□□ -2.37
HDAC4P56524 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
HDAC4P56524 AC073869.9-201ENST00000641610 120 ntBASIC0.25□□□□□ -2.37
HDAC4P56524 RNU6-664P-201ENST00000362381 107 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 SNORA9.1-201ENST00000362412 131 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 Y_RNA.107-201ENST00000363190 121 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 RNU1-141P-201ENST00000364623 158 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 RNA5SP128-201ENST00000365305 116 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 SNORD58A-201ENST00000383875 65 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 MIR501-201ENST00000390204 84 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 AL031737.1-201ENST00000450125 223 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 snoU13.19-201ENST00000459148 104 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 Y_RNA.705-201ENST00000516862 110 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms