Protein–RNA interactions for Protein: P55735

SEC13, Protein SEC13 homolog, humanhuman

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P55735 AC025627.3-201ENST00000582078 182 ntBASIC1.53□□□□□ -2.16
SEC13P55735 MIR3140-201ENST00000583685 90 ntBASIC1.53□□□□□ -2.16
SEC13P55735 SNORD114-24-201ENST00000365029 72 ntBASIC1.52□□□□□ -2.17
SEC13P55735 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
SEC13P55735 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.52□□□□□ -2.17
SEC13P55735 MIR7111-201ENST00000619751 72 ntBASIC1.52□□□□□ -2.17
SEC13P55735 Y_RNA.118-201ENST00000363300 101 ntBASIC1.51□□□□□ -2.17
SEC13P55735 RNU1-124P-201ENST00000363861 145 ntBASIC1.51□□□□□ -2.17
SEC13P55735 MIR618-201ENST00000385287 98 ntBASIC1.51□□□□□ -2.17
SEC13P55735 RNU6-1052P-201ENST00000411398 104 ntBASIC1.51□□□□□ -2.17
SEC13P55735 RNU6-719P-201ENST00000516671 104 ntBASIC1.51□□□□□ -2.17
SEC13P55735 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.51□□□□□ -2.17
SEC13P55735 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
SEC13P55735 RNU6-807P-201ENST00000516805 107 ntBASIC1.5□□□□□ -2.17
SEC13P55735 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
SEC13P55735 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SEC13P55735 Y_RNA.12-201ENST00000362393 112 ntBASIC1.49□□□□□ -2.17
SEC13P55735 RNU6-1335P-201ENST00000365426 107 ntBASIC1.49□□□□□ -2.17
SEC13P55735 MIR573-201ENST00000384964 99 ntBASIC1.49□□□□□ -2.17
SEC13P55735 MIR2113-201ENST00000459007 91 ntBASIC1.49□□□□□ -2.17
SEC13P55735 YWHAEP2-201ENST00000580066 112 ntBASIC1.49□□□□□ -2.17
SEC13P55735 MIR3920-201ENST00000581751 86 ntBASIC1.49□□□□□ -2.17
SEC13P55735 YWHAEP3-201ENST00000582767 121 ntBASIC1.49□□□□□ -2.17
SEC13P55735 MIR4639-201ENST00000584938 69 ntBASIC1.49□□□□□ -2.17
SEC13P55735 AC067863.3-201ENST00000624172 122 ntBASIC1.49□□□□□ -2.17
SEC13P55735 RNU6-1229P-201ENST00000364295 107 ntBASIC1.48□□□□□ -2.17
SEC13P55735 RNU6-939P-201ENST00000384634 107 ntBASIC1.48□□□□□ -2.17
SEC13P55735 MIR3612-201ENST00000579753 87 ntBASIC1.48□□□□□ -2.17
SEC13P55735 MIR1297-201ENST00000637311 77 ntBASIC1.48□□□□□ -2.17
SEC13P55735 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SEC13P55735 Y_RNA.224-201ENST00000364308 111 ntBASIC1.47□□□□□ -2.17
SEC13P55735 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
SEC13P55735 RNA5SP363-201ENST00000365072 115 ntBASIC1.47□□□□□ -2.17
SEC13P55735 RNU6-1126P-201ENST00000384002 107 ntBASIC1.47□□□□□ -2.17
SEC13P55735 U3.27-201ENST00000391237 200 ntBASIC1.47□□□□□ -2.17
SEC13P55735 RNA5SP255-201ENST00000516370 107 ntBASIC1.47□□□□□ -2.17
SEC13P55735 RNU6-303P-201ENST00000517091 106 ntBASIC1.47□□□□□ -2.17
SEC13P55735 MIR4484-201ENST00000582855 83 ntBASIC1.47□□□□□ -2.17
SEC13P55735 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
SEC13P55735 SNORD28-201ENST00000384706 75 ntBASIC1.46□□□□□ -2.18
SEC13P55735 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
SEC13P55735 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
SEC13P55735 AC004223.1-201ENST00000479840 271 ntBASIC1.46□□□□□ -2.18
SEC13P55735 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.46□□□□□ -2.18
SEC13P55735 AC244669.1-204ENST00000621564 178 ntBASIC1.46□□□□□ -2.18
SEC13P55735 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SEC13P55735 Y_RNA.371-201ENST00000365591 113 ntBASIC1.45□□□□□ -2.18
SEC13P55735 SCARNA18B-201ENST00000458806 135 ntBASIC1.45□□□□□ -2.18
SEC13P55735 MIR3678-201ENST00000578455 94 ntBASIC1.45□□□□□ -2.18
SEC13P55735 MIR548AG2-201ENST00000581228 64 ntBASIC1.45□□□□□ -2.18
SEC13P55735 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.45□□□□□ -2.18
SEC13P55735 Y_RNA.355-201ENST00000365462 98 ntBASIC1.44□□□□□ -2.18
SEC13P55735 Y_RNA.532-201ENST00000384590 113 ntBASIC1.44□□□□□ -2.18
SEC13P55735 SNORD18A-201ENST00000363753 72 ntBASIC1.43□□□□□ -2.18
SEC13P55735 SNORA24B-201ENST00000384176 131 ntBASIC1.43□□□□□ -2.18
SEC13P55735 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SEC13P55735 MIR548L-201ENST00000408303 86 ntBASIC1.43□□□□□ -2.18
SEC13P55735 MIR1276-201ENST00000408707 83 ntBASIC1.43□□□□□ -2.18
SEC13P55735 AC097510.1-201ENST00000510945 133 ntBASIC1.43□□□□□ -2.18
SEC13P55735 Y_RNA.788-201ENST00000622394 112 ntBASIC1.43□□□□□ -2.18
SEC13P55735 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.43□□□□□ -2.18
SEC13P55735 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SEC13P55735 MIR617-201ENST00000385030 97 ntBASIC1.42□□□□□ -2.18
SEC13P55735 MIR216B-201ENST00000390186 82 ntBASIC1.42□□□□□ -2.18
SEC13P55735 SNORD99-201ENST00000408612 74 ntBASIC1.42□□□□□ -2.18
SEC13P55735 RNU2-59P-201ENST00000410482 191 ntBASIC1.42□□□□□ -2.18
SEC13P55735 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
SEC13P55735 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.41□□□□□ -2.18
SEC13P55735 RNU6-340P-201ENST00000364005 107 ntBASIC1.41□□□□□ -2.18
SEC13P55735 RNU6-681P-201ENST00000364012 104 ntBASIC1.41□□□□□ -2.18
SEC13P55735 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SEC13P55735 RNA5SP102-201ENST00000516865 106 ntBASIC1.41□□□□□ -2.18
SEC13P55735 AC011195.1-201ENST00000578177 177 ntBASIC1.41□□□□□ -2.18
SEC13P55735 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SEC13P55735 Y_RNA.545-201ENST00000384652 105 ntBASIC1.4□□□□□ -2.19
SEC13P55735 Y_RNA.565-201ENST00000384719 101 ntBASIC1.4□□□□□ -2.19
SEC13P55735 AC074348.1-201ENST00000426503 132 ntBASIC1.4□□□□□ -2.19
SEC13P55735 RNU7-74P-201ENST00000459104 62 ntBASIC1.4□□□□□ -2.19
SEC13P55735 RNA5SP47-201ENST00000517230 109 ntBASIC1.4□□□□□ -2.19
SEC13P55735 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.4□□□□□ -2.19
SEC13P55735 MIR6504-201ENST00000613520 61 ntBASIC1.4□□□□□ -2.19
SEC13P55735 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
SEC13P55735 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.39□□□□□ -2.19
SEC13P55735 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
SEC13P55735 RNU6-1177P-201ENST00000391058 104 ntBASIC1.39□□□□□ -2.19
SEC13P55735 MIR3134-201ENST00000579433 74 ntBASIC1.39□□□□□ -2.19
SEC13P55735 MIR519E-201ENST00000385075 84 ntBASIC1.38□□□□□ -2.19
SEC13P55735 SNORD41.1-201ENST00000391000 69 ntBASIC1.38□□□□□ -2.19
SEC13P55735 Y_RNA.606-201ENST00000410579 103 ntBASIC1.38□□□□□ -2.19
SEC13P55735 RNU6-824P-201ENST00000363724 104 ntBASIC1.37□□□□□ -2.19
SEC13P55735 Y_RNA.681-201ENST00000516445 113 ntBASIC1.37□□□□□ -2.19
SEC13P55735 U6.81-201ENST00000612550 106 ntBASIC1.37□□□□□ -2.19
SEC13P55735 AC244098.3-201ENST00000424803 96 ntBASIC1.36□□□□□ -2.19
SEC13P55735 AC073261.1-201ENST00000429409 121 ntBASIC1.36□□□□□ -2.19
SEC13P55735 SCARNA16.5-201ENST00000517114 183 ntBASIC1.36□□□□□ -2.19
SEC13P55735 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.36□□□□□ -2.19
SEC13P55735 MIR18A-201ENST00000362310 71 ntBASIC1.35□□□□□ -2.19
SEC13P55735 RNU6-716P-201ENST00000365621 103 ntBASIC1.35□□□□□ -2.19
SEC13P55735 RNU6-411P-201ENST00000384451 107 ntBASIC1.35□□□□□ -2.19
SEC13P55735 RNU6-70P-201ENST00000516438 60 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 272 ms