Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 Y_RNA.596-201ENST00000410462 109 ntBASIC0.69□□□□□ -2.3
PDE1AP54750 MIR3064-201ENST00000581130 66 ntBASIC0.69□□□□□ -2.3
PDE1AP54750 AC067863.3-201ENST00000624172 122 ntBASIC0.69□□□□□ -2.3
PDE1AP54750 RNU6-633P-201ENST00000362612 103 ntBASIC0.68□□□□□ -2.3
PDE1AP54750 Y_RNA.207-201ENST00000364142 106 ntBASIC0.68□□□□□ -2.3
PDE1AP54750 RNA5SP292-201ENST00000390974 118 ntBASIC0.68□□□□□ -2.3
PDE1AP54750 RNU6-287P-201ENST00000516230 98 ntBASIC0.68□□□□□ -2.3
PDE1AP54750 RNU7-13P-201ENST00000516413 62 ntBASIC0.68□□□□□ -2.3
PDE1AP54750 RNA5SP268-201ENST00000516828 124 ntBASIC0.68□□□□□ -2.3
PDE1AP54750 Y_RNA.224-201ENST00000364308 111 ntBASIC0.67□□□□□ -2.3
PDE1AP54750 RNU6-1126P-201ENST00000384002 107 ntBASIC0.67□□□□□ -2.3
PDE1AP54750 SNORD101-201ENST00000384027 73 ntBASIC0.67□□□□□ -2.3
PDE1AP54750 SNORA8.2-201ENST00000384372 139 ntBASIC0.67□□□□□ -2.3
PDE1AP54750 MIR499A-201ENST00000384903 122 ntBASIC0.67□□□□□ -2.3
PDE1AP54750 MIR7107-201ENST00000611489 80 ntBASIC0.67□□□□□ -2.3
PDE1AP54750 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
PDE1AP54750 RNU6-1134P-201ENST00000365156 101 ntBASIC0.66□□□□□ -2.3
PDE1AP54750 RNU6-716P-201ENST00000365621 103 ntBASIC0.66□□□□□ -2.3
PDE1AP54750 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.66□□□□□ -2.3
PDE1AP54750 RNU7-153P-201ENST00000516455 62 ntBASIC0.66□□□□□ -2.3
PDE1AP54750 RNU6-762P-201ENST00000517107 102 ntBASIC0.66□□□□□ -2.3
PDE1AP54750 MIR4679-1-201ENST00000637619 75 ntBASIC0.66□□□□□ -2.3
PDE1AP54750 RNU6-509P-201ENST00000363519 107 ntBASIC0.65□□□□□ -2.31
PDE1AP54750 SNORD115-44-201ENST00000365391 82 ntBASIC0.65□□□□□ -2.31
PDE1AP54750 AC104996.3-201ENST00000590718 94 ntBASIC0.65□□□□□ -2.31
PDE1AP54750 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.65□□□□□ -2.31
PDE1AP54750 AL162376.1-201ENST00000624117 175 ntBASIC0.65□□□□□ -2.31
PDE1AP54750 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
PDE1AP54750 RNU4-32P-201ENST00000363404 141 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 SNORD118-201ENST00000363593 134 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 SNORD73B-201ENST00000364394 72 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 RNU6-811P-201ENST00000384069 107 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 Y_RNA.508-201ENST00000384502 114 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 Y_RNA.558-201ENST00000384685 113 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 MIR2113-201ENST00000459007 91 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 RNA5SP227-201ENST00000516184 113 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 RNA5SP220-201ENST00000516298 104 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
PDE1AP54750 MIR617-201ENST00000385030 97 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 MIR519E-201ENST00000385075 84 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
PDE1AP54750 RNU6-269P-201ENST00000391077 97 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 SNORD90-201ENST00000391145 111 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 AL157398.1-201ENST00000452981 186 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 SNORA18.5-201ENST00000516616 101 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 MIR151B-201ENST00000584249 96 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 AC006254.2-201ENST00000603259 279 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 AC092634.7-201ENST00000621022 103 ntBASIC0.63□□□□□ -2.31
PDE1AP54750 Y_RNA.491-201ENST00000384417 107 ntBASIC0.62□□□□□ -2.31
PDE1AP54750 AC093423.1-201ENST00000440817 142 ntBASIC0.62□□□□□ -2.31
PDE1AP54750 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
PDE1AP54750 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
PDE1AP54750 AC062037.1-201ENST00000605302 128 ntBASIC0.62□□□□□ -2.31
PDE1AP54750 SNORA25.18-201ENST00000607153 114 ntBASIC0.62□□□□□ -2.31
PDE1AP54750 MIR548BB-201ENST00000626714 66 ntBASIC0.62□□□□□ -2.31
PDE1AP54750 Y_RNA.73-201ENST00000362910 113 ntBASIC0.61□□□□□ -2.31
PDE1AP54750 Y_RNA.239-201ENST00000364444 113 ntBASIC0.61□□□□□ -2.31
PDE1AP54750 MIR519C-201ENST00000385053 87 ntBASIC0.61□□□□□ -2.31
PDE1AP54750 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
PDE1AP54750 MIR1236-201ENST00000408340 102 ntBASIC0.61□□□□□ -2.31
PDE1AP54750 RNU1-29P-201ENST00000606574 126 ntBASIC0.61□□□□□ -2.31
PDE1AP54750 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.61□□□□□ -2.31
PDE1AP54750 RNU6-42P-201ENST00000384165 107 ntBASIC0.6□□□□□ -2.31
PDE1AP54750 MIR450A2-201ENST00000385022 100 ntBASIC0.6□□□□□ -2.31
PDE1AP54750 MIR548U-201ENST00000390728 81 ntBASIC0.6□□□□□ -2.31
PDE1AP54750 MIR1287-201ENST00000408492 90 ntBASIC0.6□□□□□ -2.31
PDE1AP54750 RNU6-935P-201ENST00000410371 100 ntBASIC0.6□□□□□ -2.31
PDE1AP54750 SNORA40.8-201ENST00000411034 126 ntBASIC0.6□□□□□ -2.31
PDE1AP54750 RNA5SP247-201ENST00000411181 105 ntBASIC0.6□□□□□ -2.31
PDE1AP54750 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
PDE1AP54750 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
PDE1AP54750 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
PDE1AP54750 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
PDE1AP54750 MIR518A1-201ENST00000385068 85 ntBASIC0.59□□□□□ -2.31
PDE1AP54750 MIR548L-201ENST00000408303 86 ntBASIC0.59□□□□□ -2.31
PDE1AP54750 AC069271.1-201ENST00000445577 156 ntBASIC0.59□□□□□ -2.31
PDE1AP54750 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.59□□□□□ -2.31
PDE1AP54750 MIR494-201ENST00000349529 81 ntBASIC0.58□□□□□ -2.32
PDE1AP54750 RNY1P1-201ENST00000364372 112 ntBASIC0.58□□□□□ -2.32
PDE1AP54750 RNU6-979P-201ENST00000383896 107 ntBASIC0.58□□□□□ -2.32
PDE1AP54750 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
PDE1AP54750 MIR4796-201ENST00000580742 81 ntBASIC0.58□□□□□ -2.32
PDE1AP54750 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.58□□□□□ -2.32
PDE1AP54750 AC006160.2-201ENST00000637708 154 ntBASIC0.58□□□□□ -2.32
PDE1AP54750 MIR451A-201ENST00000385059 72 ntBASIC0.57□□□□□ -2.32
PDE1AP54750 MIR4752-201ENST00000579672 72 ntBASIC0.57□□□□□ -2.32
PDE1AP54750 MIR5588-201ENST00000581890 63 ntBASIC0.57□□□□□ -2.32
PDE1AP54750 MIR3140-201ENST00000583685 90 ntBASIC0.57□□□□□ -2.32
PDE1AP54750 IGLL4P-201ENST00000614590 133 ntBASIC0.57□□□□□ -2.32
PDE1AP54750 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
PDE1AP54750 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
PDE1AP54750 RNU1-141P-201ENST00000364623 158 ntBASIC0.56□□□□□ -2.32
PDE1AP54750 RNU6-1051P-201ENST00000365471 102 ntBASIC0.56□□□□□ -2.32
PDE1AP54750 Y_RNA.388-201ENST00000383919 113 ntBASIC0.56□□□□□ -2.32
PDE1AP54750 SNORA24B-201ENST00000384176 131 ntBASIC0.56□□□□□ -2.32
PDE1AP54750 RNU6-820P-201ENST00000384273 107 ntBASIC0.56□□□□□ -2.32
PDE1AP54750 Y_RNA.611-201ENST00000410682 108 ntBASIC0.56□□□□□ -2.32
PDE1AP54750 AC093729.1-201ENST00000513074 128 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 258.3 ms