Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RN7SKP12-201ENST00000516275 143 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 RNA5SP47-201ENST00000517230 109 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 RNU7-161P-201ENST00000517289 62 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 MIR4536-1-201ENST00000583537 88 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 AC062037.1-201ENST00000605302 128 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 MIR6828-201ENST00000636181 60 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 SNORD115-44-201ENST00000365391 82 ntBASIC0.72□□□□□ -2.29
HOXA11P31270 RNU6-979P-201ENST00000383896 107 ntBASIC0.72□□□□□ -2.29
HOXA11P31270 RNY4P29-201ENST00000410801 97 ntBASIC0.72□□□□□ -2.29
HOXA11P31270 RNU6-267P-201ENST00000516714 103 ntBASIC0.72□□□□□ -2.29
HOXA11P31270 MIR3678-201ENST00000578455 94 ntBASIC0.72□□□□□ -2.29
HOXA11P31270 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
HOXA11P31270 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HOXA11P31270 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HOXA11P31270 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
HOXA11P31270 SNORD115-24-201ENST00000363528 82 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 SNORD115-27-201ENST00000364430 82 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 MIR519C-201ENST00000385053 87 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 MIR644A-201ENST00000385262 94 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 SNORD41.1-201ENST00000391000 69 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 MIR1236-201ENST00000408340 102 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 Y_RNA.596-201ENST00000410462 109 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 RNU6-65P-201ENST00000516332 98 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 SNORA72.7-201ENST00000516349 94 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 MIR3064-201ENST00000581130 66 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 U6.100-201ENST00000636230 99 ntBASIC0.71□□□□□ -2.3
HOXA11P31270 RNU6-664P-201ENST00000362381 107 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 RNU6-132P-201ENST00000383863 107 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 RNU7-171P-201ENST00000459581 62 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.7□□□□□ -2.3
HOXA11P31270 AC011195.1-201ENST00000578177 177 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 MIR4696-201ENST00000581431 70 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 MIR5588-201ENST00000581890 63 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 AC104996.3-201ENST00000590718 94 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 MIR548BB-201ENST00000626714 66 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 AC006160.2-201ENST00000637708 154 ntBASIC0.7□□□□□ -2.3
HOXA11P31270 RNY1P1-201ENST00000364372 112 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 Y_RNA.388-201ENST00000383919 113 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 RNU6-811P-201ENST00000384069 107 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 MIR548U-201ENST00000390728 81 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 SNORA26.2-201ENST00000390922 122 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 RNU6-469P-201ENST00000516253 101 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 SCARNA16.5-201ENST00000517114 183 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 MIR3920-201ENST00000581751 86 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 AC244669.1-204ENST00000621564 178 ntBASIC0.69□□□□□ -2.3
HOXA11P31270 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
HOXA11P31270 Y_RNA.221-201ENST00000364248 96 ntBASIC0.68□□□□□ -2.3
HOXA11P31270 SNORD101-201ENST00000384027 73 ntBASIC0.68□□□□□ -2.3
HOXA11P31270 IGLL4P-201ENST00000614590 133 ntBASIC0.68□□□□□ -2.3
HOXA11P31270 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
HOXA11P31270 RNU6-726P-201ENST00000364680 107 ntBASIC0.67□□□□□ -2.3
HOXA11P31270 RNU6-1126P-201ENST00000384002 107 ntBASIC0.67□□□□□ -2.3
HOXA11P31270 AC093729.1-201ENST00000513074 128 ntBASIC0.67□□□□□ -2.3
HOXA11P31270 AC140658.3-201ENST00000567603 271 ntBASIC0.67□□□□□ -2.3
HOXA11P31270 MIR494-201ENST00000349529 81 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 RNU6-624P-201ENST00000363411 107 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 SNORA36.1-201ENST00000363424 132 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 Y_RNA.207-201ENST00000364142 106 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 Y_RNA.491-201ENST00000384417 107 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 RNA5SP292-201ENST00000390974 118 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 Y_RNA.607-201ENST00000410597 98 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 AC022137.1-201ENST00000483735 151 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 MIR548AG2-201ENST00000581228 64 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
HOXA11P31270 Y_RNA.73-201ENST00000362910 113 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 RNU6-1229P-201ENST00000364295 107 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 Y_RNA.239-201ENST00000364444 113 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 Y_RNA.426-201ENST00000384068 113 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 MIR617-201ENST00000385030 97 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 MIR936-201ENST00000401264 98 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 RNA5SP193-201ENST00000410353 107 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 RNU6-935P-201ENST00000410371 100 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 RNU6-287P-201ENST00000516230 98 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 RNU7-13P-201ENST00000516413 62 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 SNORA18.5-201ENST00000516616 101 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 RNA5SP94-201ENST00000516917 108 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 MIR4666B-201ENST00000578142 81 ntBASIC0.65□□□□□ -2.31
HOXA11P31270 MIRLET7F1-201ENST00000362202 87 ntBASIC0.64□□□□□ -2.31
HOXA11P31270 RNU4-32P-201ENST00000363404 141 ntBASIC0.64□□□□□ -2.31
HOXA11P31270 U3.27-201ENST00000391237 200 ntBASIC0.64□□□□□ -2.31
HOXA11P31270 RNU7-153P-201ENST00000516455 62 ntBASIC0.64□□□□□ -2.31
HOXA11P31270 MIR4796-201ENST00000580742 81 ntBASIC0.64□□□□□ -2.31
HOXA11P31270 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.64□□□□□ -2.31
HOXA11P31270 AL162376.1-201ENST00000624117 175 ntBASIC0.64□□□□□ -2.31
HOXA11P31270 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HOXA11P31270 Y_RNA.611-201ENST00000410682 108 ntBASIC0.63□□□□□ -2.31
HOXA11P31270 RNA5SP222-201ENST00000411039 105 ntBASIC0.63□□□□□ -2.31
HOXA11P31270 RNU6-592P-201ENST00000411333 103 ntBASIC0.63□□□□□ -2.31
HOXA11P31270 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
HOXA11P31270 AC093423.1-201ENST00000440817 142 ntBASIC0.63□□□□□ -2.31
HOXA11P31270 MIR2113-201ENST00000459007 91 ntBASIC0.63□□□□□ -2.31
HOXA11P31270 RNU7-74P-201ENST00000459104 62 ntBASIC0.63□□□□□ -2.31
HOXA11P31270 RNU7-104P-201ENST00000459398 79 ntBASIC0.63□□□□□ -2.31
HOXA11P31270 SNORA25.13-201ENST00000516395 103 ntBASIC0.63□□□□□ -2.31
HOXA11P31270 SNORD115-37-201ENST00000363768 82 ntBASIC0.62□□□□□ -2.31
HOXA11P31270 RNU6-1276P-201ENST00000365372 104 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms