Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MIR4536-1-201ENST00000583537 88 ntBASIC0.55□□□□□ -2.32
EPHA3P29320 MALAT1.1-201ENST00000618249 95 ntBASIC0.55□□□□□ -2.32
EPHA3P29320 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
EPHA3P29320 MIR488-201ENST00000365739 83 ntBASIC0.54□□□□□ -2.32
EPHA3P29320 MIR598-201ENST00000384868 97 ntBASIC0.54□□□□□ -2.32
EPHA3P29320 SNORD41.1-201ENST00000391000 69 ntBASIC0.54□□□□□ -2.32
EPHA3P29320 Y_RNA.596-201ENST00000410462 109 ntBASIC0.54□□□□□ -2.32
EPHA3P29320 RNU6-519P-201ENST00000410590 108 ntBASIC0.54□□□□□ -2.32
EPHA3P29320 AC069271.1-201ENST00000445577 156 ntBASIC0.54□□□□□ -2.32
EPHA3P29320 RN7SKP12-201ENST00000516275 143 ntBASIC0.54□□□□□ -2.32
EPHA3P29320 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
EPHA3P29320 SNORD115-44-201ENST00000365391 82 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 RNU6-269P-201ENST00000391077 97 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 Y_RNA.609-201ENST00000410669 89 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 AC098934.3-201ENST00000430450 190 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 SNORD4B-201ENST00000459083 72 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 RNU6-287P-201ENST00000516230 98 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 AC026421.1-201ENST00000519101 163 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 MIR4752-201ENST00000579672 72 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 MIR548AG2-201ENST00000581228 64 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
EPHA3P29320 MIRLET7F1-201ENST00000362202 87 ntBASIC0.51□□□□□ -2.33
EPHA3P29320 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
EPHA3P29320 RNU6-1126P-201ENST00000384002 107 ntBASIC0.51□□□□□ -2.33
EPHA3P29320 SNORD101-201ENST00000384027 73 ntBASIC0.51□□□□□ -2.33
EPHA3P29320 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.51□□□□□ -2.33
EPHA3P29320 MIR4696-201ENST00000581431 70 ntBASIC0.51□□□□□ -2.33
EPHA3P29320 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
EPHA3P29320 AL162376.1-201ENST00000624117 175 ntBASIC0.51□□□□□ -2.33
EPHA3P29320 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
EPHA3P29320 RNU6-664P-201ENST00000362381 107 ntBASIC0.5□□□□□ -2.33
EPHA3P29320 Y_RNA.207-201ENST00000364142 106 ntBASIC0.5□□□□□ -2.33
EPHA3P29320 MIR2113-201ENST00000459007 91 ntBASIC0.5□□□□□ -2.33
EPHA3P29320 MTRNR2L2-201ENST00000604882 87 ntBASIC0.5□□□□□ -2.33
EPHA3P29320 RNU6-132P-201ENST00000383863 107 ntBASIC0.49□□□□□ -2.33
EPHA3P29320 RNY1P7-201ENST00000384743 110 ntBASIC0.49□□□□□ -2.33
EPHA3P29320 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
EPHA3P29320 SNORD44.1-201ENST00000363202 61 ntBASIC0.48□□□□□ -2.33
EPHA3P29320 MIR519E-201ENST00000385075 84 ntBASIC0.48□□□□□ -2.33
EPHA3P29320 RNY4P30-201ENST00000410216 95 ntBASIC0.48□□□□□ -2.33
EPHA3P29320 RNU2-59P-201ENST00000410482 191 ntBASIC0.48□□□□□ -2.33
EPHA3P29320 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.48□□□□□ -2.33
EPHA3P29320 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.48□□□□□ -2.33
EPHA3P29320 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
EPHA3P29320 RNU6-1131P-201ENST00000364955 107 ntBASIC0.47□□□□□ -2.33
EPHA3P29320 Y_RNA.423-201ENST00000384057 113 ntBASIC0.47□□□□□ -2.33
EPHA3P29320 MIR617-201ENST00000385030 97 ntBASIC0.47□□□□□ -2.33
EPHA3P29320 PVT1_3.1-201ENST00000620853 95 ntBASIC0.47□□□□□ -2.33
EPHA3P29320 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.47□□□□□ -2.33
EPHA3P29320 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
EPHA3P29320 MIR103A1-201ENST00000362165 78 ntBASIC0.46□□□□□ -2.34
EPHA3P29320 RNU4-32P-201ENST00000363404 141 ntBASIC0.46□□□□□ -2.34
EPHA3P29320 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
EPHA3P29320 Y_RNA.220-201ENST00000364244 109 ntBASIC0.46□□□□□ -2.34
EPHA3P29320 Y_RNA.239-201ENST00000364444 113 ntBASIC0.46□□□□□ -2.34
EPHA3P29320 RNA5SP484-201ENST00000458857 111 ntBASIC0.46□□□□□ -2.34
EPHA3P29320 RNU7-74P-201ENST00000459104 62 ntBASIC0.46□□□□□ -2.34
EPHA3P29320 MIR3064-201ENST00000581130 66 ntBASIC0.45□□□□□ -2.34
EPHA3P29320 SNORA70.25-201ENST00000612741 95 ntBASIC0.45□□□□□ -2.34
EPHA3P29320 MIR6755-201ENST00000619993 66 ntBASIC0.45□□□□□ -2.34
EPHA3P29320 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
EPHA3P29320 RNU6-509P-201ENST00000363519 107 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 RNU6-811P-201ENST00000384069 107 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 RNU6-49P-201ENST00000384256 107 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 RNY1P4-201ENST00000384595 115 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 MIR548U-201ENST00000390728 81 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
EPHA3P29320 RNU6-935P-201ENST00000410371 100 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 RNU6-1057P-201ENST00000517162 102 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 NAMPTP3-201ENST00000569273 224 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 RNU1-29P-201ENST00000606574 126 ntBASIC0.44□□□□□ -2.34
EPHA3P29320 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
EPHA3P29320 RNA5SP292-201ENST00000390974 118 ntBASIC0.43□□□□□ -2.34
EPHA3P29320 MIR936-201ENST00000401264 98 ntBASIC0.43□□□□□ -2.34
EPHA3P29320 RNA5SP436-201ENST00000516020 115 ntBASIC0.43□□□□□ -2.34
EPHA3P29320 AC104996.3-201ENST00000590718 94 ntBASIC0.43□□□□□ -2.34
EPHA3P29320 Y_RNA.540-201ENST00000384638 111 ntBASIC0.42□□□□□ -2.34
EPHA3P29320 MIR451A-201ENST00000385059 72 ntBASIC0.42□□□□□ -2.34
EPHA3P29320 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
EPHA3P29320 AC073869.9-201ENST00000641610 120 ntBASIC0.42□□□□□ -2.34
EPHA3P29320 RNU1-141P-201ENST00000364623 158 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 Y_RNA.491-201ENST00000384417 107 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 RNU6-1232P-201ENST00000516299 86 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 Y_RNA.694-201ENST00000516677 117 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 RNA5SP480-201ENST00000516840 109 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 MIR4711-201ENST00000578274 70 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 MIR4668-201ENST00000582284 70 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 RN7SL793P-201ENST00000583259 296 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.41□□□□□ -2.34
EPHA3P29320 Y_RNA.36-201ENST00000362602 112 ntBASIC0.4□□□□□ -2.35
EPHA3P29320 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
EPHA3P29320 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
EPHA3P29320 AC006210.1-201ENST00000424882 111 ntBASIC0.4□□□□□ -2.35
EPHA3P29320 AC093423.1-201ENST00000440817 142 ntBASIC0.4□□□□□ -2.35
EPHA3P29320 SNORD114-26-201ENST00000363543 72 ntBASIC0.39□□□□□ -2.35
EPHA3P29320 SNORD115-27-201ENST00000364430 82 ntBASIC0.39□□□□□ -2.35
EPHA3P29320 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
EPHA3P29320 SNORD116-22-201ENST00000384430 92 ntBASIC0.39□□□□□ -2.35
EPHA3P29320 MIR760-201ENST00000390220 80 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms