Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6-939P-201ENST00000384634 107 ntBASIC1.51□□□□□ -2.17
RFX1P22670 MIR573-201ENST00000384964 99 ntBASIC1.51□□□□□ -2.17
RFX1P22670 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.51□□□□□ -2.17
RFX1P22670 RNU6-1094P-201ENST00000362416 104 ntBASIC1.5□□□□□ -2.17
RFX1P22670 RNU6-161P-201ENST00000363051 106 ntBASIC1.5□□□□□ -2.17
RFX1P22670 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.5□□□□□ -2.17
RFX1P22670 MTRNR2L2-201ENST00000604882 87 ntBASIC1.5□□□□□ -2.17
RFX1P22670 U7.4-201ENST00000614961 63 ntBASIC1.5□□□□□ -2.17
RFX1P22670 U6.100-201ENST00000636230 99 ntBASIC1.5□□□□□ -2.17
RFX1P22670 MIRLET7A1-201ENST00000362295 80 ntBASIC1.49□□□□□ -2.17
RFX1P22670 RNU6-664P-201ENST00000362381 107 ntBASIC1.49□□□□□ -2.17
RFX1P22670 SNORD115-24-201ENST00000363528 82 ntBASIC1.49□□□□□ -2.17
RFX1P22670 Y_RNA.491-201ENST00000384417 107 ntBASIC1.49□□□□□ -2.17
RFX1P22670 Y_RNA.565-201ENST00000384719 101 ntBASIC1.49□□□□□ -2.17
RFX1P22670 MIR644A-201ENST00000385262 94 ntBASIC1.49□□□□□ -2.17
RFX1P22670 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
RFX1P22670 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
RFX1P22670 MIR4696-201ENST00000581431 70 ntBASIC1.49□□□□□ -2.17
RFX1P22670 RNU6-686P-201ENST00000364839 107 ntBASIC1.48□□□□□ -2.17
RFX1P22670 SNORD101-201ENST00000384027 73 ntBASIC1.48□□□□□ -2.17
RFX1P22670 Y_RNA.596-201ENST00000410462 109 ntBASIC1.48□□□□□ -2.17
RFX1P22670 RNU6-1108P-201ENST00000516308 104 ntBASIC1.48□□□□□ -2.17
RFX1P22670 RNA5SP403-201ENST00000363598 108 ntBASIC1.47□□□□□ -2.17
RFX1P22670 Y_RNA.239-201ENST00000364444 113 ntBASIC1.47□□□□□ -2.17
RFX1P22670 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RFX1P22670 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.47□□□□□ -2.17
RFX1P22670 FGF7P7-201ENST00000514120 227 ntBASIC1.47□□□□□ -2.17
RFX1P22670 MIR3612-201ENST00000579753 87 ntBASIC1.47□□□□□ -2.17
RFX1P22670 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.47□□□□□ -2.17
RFX1P22670 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
RFX1P22670 Y_RNA.788-201ENST00000622394 112 ntBASIC1.47□□□□□ -2.17
RFX1P22670 SNORD90-201ENST00000391145 111 ntBASIC1.46□□□□□ -2.18
RFX1P22670 MIR4661-201ENST00000582720 75 ntBASIC1.46□□□□□ -2.18
RFX1P22670 Y_RNA.36-201ENST00000362602 112 ntBASIC1.45□□□□□ -2.18
RFX1P22670 AC139453.2-201ENST00000487255 133 ntBASIC1.45□□□□□ -2.18
RFX1P22670 Y_RNA.660-201ENST00000516002 120 ntBASIC1.45□□□□□ -2.18
RFX1P22670 RNU6-469P-201ENST00000516253 101 ntBASIC1.45□□□□□ -2.18
RFX1P22670 MIR4639-201ENST00000584938 69 ntBASIC1.45□□□□□ -2.18
RFX1P22670 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.45□□□□□ -2.18
RFX1P22670 RNU4-45P-201ENST00000365469 141 ntBASIC1.44□□□□□ -2.18
RFX1P22670 SCARNA18B-201ENST00000458806 135 ntBASIC1.44□□□□□ -2.18
RFX1P22670 RNU7-161P-201ENST00000517289 62 ntBASIC1.44□□□□□ -2.18
RFX1P22670 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.44□□□□□ -2.18
RFX1P22670 SNORD115-44-201ENST00000365391 82 ntBASIC1.43□□□□□ -2.18
RFX1P22670 Y_RNA.532-201ENST00000384590 113 ntBASIC1.43□□□□□ -2.18
RFX1P22670 SNORD77.2-201ENST00000391045 68 ntBASIC1.43□□□□□ -2.18
RFX1P22670 SNORD99-201ENST00000408612 74 ntBASIC1.43□□□□□ -2.18
RFX1P22670 RNU6-380P-201ENST00000410207 107 ntBASIC1.43□□□□□ -2.18
RFX1P22670 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
RFX1P22670 SNORD114-26-201ENST00000363543 72 ntBASIC1.42□□□□□ -2.18
RFX1P22670 Y_RNA.545-201ENST00000384652 105 ntBASIC1.42□□□□□ -2.18
RFX1P22670 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
RFX1P22670 MIR3678-201ENST00000578455 94 ntBASIC1.42□□□□□ -2.18
RFX1P22670 RNU6-208P-201ENST00000362431 107 ntBASIC1.41□□□□□ -2.18
RFX1P22670 Y_RNA.207-201ENST00000364142 106 ntBASIC1.41□□□□□ -2.18
RFX1P22670 SNORD28-201ENST00000384706 75 ntBASIC1.41□□□□□ -2.18
RFX1P22670 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
RFX1P22670 RPS29P1-201ENST00000465274 159 ntBASIC1.41□□□□□ -2.18
RFX1P22670 RNU6-523P-201ENST00000516304 54 ntBASIC1.41□□□□□ -2.18
RFX1P22670 RNU7-13P-201ENST00000516413 62 ntBASIC1.41□□□□□ -2.18
RFX1P22670 MIR3134-201ENST00000579433 74 ntBASIC1.41□□□□□ -2.18
RFX1P22670 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
RFX1P22670 MIR6779-201ENST00000617283 64 ntBASIC1.41□□□□□ -2.18
RFX1P22670 RNA5SP325-201ENST00000363756 130 ntBASIC1.4□□□□□ -2.19
RFX1P22670 SNORD114-27-201ENST00000363766 70 ntBASIC1.4□□□□□ -2.19
RFX1P22670 Y_RNA.540-201ENST00000384638 111 ntBASIC1.4□□□□□ -2.19
RFX1P22670 MIR598-201ENST00000384868 97 ntBASIC1.4□□□□□ -2.19
RFX1P22670 AC244098.3-201ENST00000424803 96 ntBASIC1.4□□□□□ -2.19
RFX1P22670 RNU6-287P-201ENST00000516230 98 ntBASIC1.4□□□□□ -2.19
RFX1P22670 RNU6-1223P-201ENST00000517124 104 ntBASIC1.4□□□□□ -2.19
RFX1P22670 AC011195.1-201ENST00000578177 177 ntBASIC1.4□□□□□ -2.19
RFX1P22670 MIR4484-201ENST00000582855 83 ntBASIC1.4□□□□□ -2.19
RFX1P22670 AL353765.1-201ENST00000605514 183 ntBASIC1.4□□□□□ -2.19
RFX1P22670 AC022709.1-201ENST00000615967 87 ntBASIC1.4□□□□□ -2.19
RFX1P22670 Y_RNA.264-201ENST00000364665 102 ntBASIC1.39□□□□□ -2.19
RFX1P22670 RNU6-1051P-201ENST00000365471 102 ntBASIC1.39□□□□□ -2.19
RFX1P22670 snoU13.17-201ENST00000458802 104 ntBASIC1.39□□□□□ -2.19
RFX1P22670 MIR151B-201ENST00000584249 96 ntBASIC1.39□□□□□ -2.19
RFX1P22670 AC244669.1-204ENST00000621564 178 ntBASIC1.39□□□□□ -2.19
RFX1P22670 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.39□□□□□ -2.19
RFX1P22670 SNORD18A-201ENST00000363753 72 ntBASIC1.38□□□□□ -2.19
RFX1P22670 SNORA40.6-201ENST00000391153 128 ntBASIC1.38□□□□□ -2.19
RFX1P22670 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.38□□□□□ -2.19
RFX1P22670 RNU6-935P-201ENST00000410371 100 ntBASIC1.38□□□□□ -2.19
RFX1P22670 RNU7-104P-201ENST00000459398 79 ntBASIC1.38□□□□□ -2.19
RFX1P22670 MIR3920-201ENST00000581751 86 ntBASIC1.38□□□□□ -2.19
RFX1P22670 AC067863.3-201ENST00000624172 122 ntBASIC1.38□□□□□ -2.19
RFX1P22670 MIR96-201ENST00000362288 78 ntBASIC1.37□□□□□ -2.19
RFX1P22670 MIR520E-201ENST00000384867 87 ntBASIC1.37□□□□□ -2.19
RFX1P22670 RNU6-807P-201ENST00000516805 107 ntBASIC1.37□□□□□ -2.19
RFX1P22670 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.37□□□□□ -2.19
RFX1P22670 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.37□□□□□ -2.19
RFX1P22670 MIR18A-201ENST00000362310 71 ntBASIC1.36□□□□□ -2.19
RFX1P22670 RNA5SP47-201ENST00000517230 109 ntBASIC1.36□□□□□ -2.19
RFX1P22670 MIR3140-201ENST00000583685 90 ntBASIC1.36□□□□□ -2.19
RFX1P22670 Y_RNA.12-201ENST00000362393 112 ntBASIC1.35□□□□□ -2.19
RFX1P22670 RNU5F-1-201ENST00000362507 117 ntBASIC1.35□□□□□ -2.19
RFX1P22670 OR2A41P-201ENST00000473586 105 ntBASIC1.35□□□□□ -2.19
RFX1P22670 RNU6-303P-201ENST00000517091 106 ntBASIC1.35□□□□□ -2.19
RFX1P22670 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms