Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.52□□□□□ -2.49
XRCC1P18887 AC074198.2-201ENST00000508153 258 ntBASIC-0.52□□□□□ -2.49
XRCC1P18887 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.52□□□□□ -2.49
XRCC1P18887 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.52□□□□□ -2.49
XRCC1P18887 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.53□□□□□ -2.49
XRCC1P18887 RNU6-480P-201ENST00000384332 107 ntBASIC-0.53□□□□□ -2.49
XRCC1P18887 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.53□□□□□ -2.49
XRCC1P18887 MIR4436A-201ENST00000585278 85 ntBASIC-0.53□□□□□ -2.49
XRCC1P18887 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 RNU6-154P-201ENST00000384306 106 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 RNU6-735P-201ENST00000410612 107 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 RNU6-182P-201ENST00000516970 105 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 AC007012.1-201ENST00000567192 175 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 AL391099.1-201ENST00000624635 187 ntBASIC-0.54□□□□□ -2.5
XRCC1P18887 RNY4P3-201ENST00000365254 95 ntBASIC-0.55□□□□□ -2.5
XRCC1P18887 MIR224-201ENST00000384889 81 ntBASIC-0.55□□□□□ -2.5
XRCC1P18887 RNU6-466P-201ENST00000391224 103 ntBASIC-0.55□□□□□ -2.5
XRCC1P18887 RNA5SP25-201ENST00000410815 110 ntBASIC-0.55□□□□□ -2.5
XRCC1P18887 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.55□□□□□ -2.5
XRCC1P18887 U6.100-201ENST00000636230 99 ntBASIC-0.55□□□□□ -2.5
XRCC1P18887 AC099654.10-201ENST00000640395 161 ntBASIC-0.55□□□□□ -2.5
XRCC1P18887 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
XRCC1P18887 MIR20A-201ENST00000362279 71 ntBASIC-0.56□□□□□ -2.5
XRCC1P18887 RNU6-30P-201ENST00000384561 107 ntBASIC-0.56□□□□□ -2.5
XRCC1P18887 RNA5SP476-201ENST00000516613 103 ntBASIC-0.56□□□□□ -2.5
XRCC1P18887 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.56□□□□□ -2.5
XRCC1P18887 MIR3144-201ENST00000579460 79 ntBASIC-0.56□□□□□ -2.5
XRCC1P18887 MIR4432-201ENST00000581823 84 ntBASIC-0.56□□□□□ -2.5
XRCC1P18887 MIR548AE1-201ENST00000583292 70 ntBASIC-0.56□□□□□ -2.5
XRCC1P18887 AL442128.1-201ENST00000615151 90 ntBASIC-0.56□□□□□ -2.5
XRCC1P18887 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.57□□□□□ -2.5
XRCC1P18887 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.57□□□□□ -2.5
XRCC1P18887 RNU6-957P-201ENST00000363652 99 ntBASIC-0.57□□□□□ -2.5
XRCC1P18887 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.57□□□□□ -2.5
XRCC1P18887 AL161932.1-201ENST00000437408 146 ntBASIC-0.57□□□□□ -2.5
XRCC1P18887 HAR1A.1-201ENST00000459583 118 ntBASIC-0.57□□□□□ -2.5
XRCC1P18887 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 MIR539-201ENST00000365690 78 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 MIR569-201ENST00000385228 96 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 AL353813.1-201ENST00000440700 253 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 snoU13.19-201ENST00000459148 104 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 RNU6-781P-201ENST00000516377 101 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 RNU6-175P-201ENST00000516896 107 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 AC096720.1-201ENST00000604441 183 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 AL353621.2-201ENST00000605340 133 ntBASIC-0.58□□□□□ -2.5
XRCC1P18887 SNORD101-201ENST00000384027 73 ntBASIC-0.59□□□□□ -2.5
XRCC1P18887 RNU6-804P-201ENST00000384286 107 ntBASIC-0.59□□□□□ -2.5
XRCC1P18887 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
XRCC1P18887 RNU6-816P-201ENST00000390914 107 ntBASIC-0.59□□□□□ -2.5
XRCC1P18887 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.59□□□□□ -2.5
XRCC1P18887 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.59□□□□□ -2.5
XRCC1P18887 AC244090.1-201ENST00000441884 93 ntBASIC-0.59□□□□□ -2.5
XRCC1P18887 AC025166.1-201ENST00000612411 163 ntBASIC-0.59□□□□□ -2.5
XRCC1P18887 RNU6-664P-201ENST00000362381 107 ntBASIC-0.6□□□□□ -2.51
XRCC1P18887 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.6□□□□□ -2.51
XRCC1P18887 RNU4-63P-201ENST00000411313 118 ntBASIC-0.6□□□□□ -2.51
XRCC1P18887 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
XRCC1P18887 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.61□□□□□ -2.51
XRCC1P18887 SNORD95.1-201ENST00000364099 68 ntBASIC-0.61□□□□□ -2.51
XRCC1P18887 SNORD114-15-201ENST00000364687 72 ntBASIC-0.61□□□□□ -2.51
XRCC1P18887 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.61□□□□□ -2.51
XRCC1P18887 MIR4696-201ENST00000581431 70 ntBASIC-0.61□□□□□ -2.51
XRCC1P18887 RNU6-235P-201ENST00000362644 107 ntBASIC-0.62□□□□□ -2.51
XRCC1P18887 SNORD58C-201ENST00000365223 64 ntBASIC-0.62□□□□□ -2.51
XRCC1P18887 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.62□□□□□ -2.51
XRCC1P18887 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
XRCC1P18887 MTND5P18-201ENST00000445624 1801 ntBASIC-0.62□□□□□ -2.51
XRCC1P18887 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.63□□□□□ -2.51
XRCC1P18887 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.63□□□□□ -2.51
XRCC1P18887 RNU6-455P-201ENST00000384681 107 ntBASIC-0.63□□□□□ -2.51
XRCC1P18887 RNU6-935P-201ENST00000410371 100 ntBASIC-0.63□□□□□ -2.51
XRCC1P18887 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.63□□□□□ -2.51
XRCC1P18887 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.63□□□□□ -2.51
XRCC1P18887 MIR548O2-201ENST00000616090 70 ntBASIC-0.63□□□□□ -2.51
XRCC1P18887 SNORD114-14-201ENST00000362723 75 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 MIR9-2-201ENST00000384838 87 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 MIR652-201ENST00000385278 98 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 SNORD2-201ENST00000459163 69 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.64□□□□□ -2.51
XRCC1P18887 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.65□□□□□ -2.51
XRCC1P18887 U3.27-201ENST00000391237 200 ntBASIC-0.65□□□□□ -2.51
XRCC1P18887 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.65□□□□□ -2.51
XRCC1P18887 AC093726.3-201ENST00000637588 150 ntBASIC-0.65□□□□□ -2.51
XRCC1P18887 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.66□□□□□ -2.52
XRCC1P18887 RNU6-886P-201ENST00000384319 105 ntBASIC-0.66□□□□□ -2.52
XRCC1P18887 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
XRCC1P18887 snoU13.11-201ENST00000459219 104 ntBASIC-0.66□□□□□ -2.52
XRCC1P18887 MIR4679-2-201ENST00000578358 77 ntBASIC-0.66□□□□□ -2.52
XRCC1P18887 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.67□□□□□ -2.52
XRCC1P18887 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.67□□□□□ -2.52
XRCC1P18887 RNU6-900P-201ENST00000384498 102 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms