Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
HOXC6P09630 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
HOXC6P09630 MIR4668-201ENST00000582284 70 ntBASIC0.71□□□□□ -2.3
HOXC6P09630 MIR4536-1-201ENST00000583537 88 ntBASIC0.71□□□□□ -2.3
HOXC6P09630 AC006254.2-201ENST00000603259 279 ntBASIC0.71□□□□□ -2.3
HOXC6P09630 U6.100-201ENST00000636230 99 ntBASIC0.71□□□□□ -2.3
HOXC6P09630 MIR924-201ENST00000638017 53 ntBASIC0.71□□□□□ -2.3
HOXC6P09630 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HOXC6P09630 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 SNORD115-27-201ENST00000364430 82 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 SNORD116-22-201ENST00000384430 92 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 SNORD28-201ENST00000384706 75 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 Y_RNA.593-201ENST00000410292 98 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 RNU6-469P-201ENST00000516253 101 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 RNU6-762P-201ENST00000517107 102 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 AC244669.1-204ENST00000621564 178 ntBASIC0.7□□□□□ -2.3
HOXC6P09630 MIRLET7F1-201ENST00000362202 87 ntBASIC0.69□□□□□ -2.3
HOXC6P09630 RNU4-32P-201ENST00000363404 141 ntBASIC0.69□□□□□ -2.3
HOXC6P09630 SNORD73B-201ENST00000364394 72 ntBASIC0.69□□□□□ -2.3
HOXC6P09630 Y_RNA.258-201ENST00000364613 105 ntBASIC0.69□□□□□ -2.3
HOXC6P09630 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
HOXC6P09630 RNU6-466P-201ENST00000391224 103 ntBASIC0.69□□□□□ -2.3
HOXC6P09630 RNA5SP330-201ENST00000517096 96 ntBASIC0.69□□□□□ -2.3
HOXC6P09630 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.69□□□□□ -2.3
HOXC6P09630 RNA5SP403-201ENST00000363598 108 ntBASIC0.68□□□□□ -2.3
HOXC6P09630 RNU6-219P-201ENST00000364728 107 ntBASIC0.68□□□□□ -2.3
HOXC6P09630 RNU6-132P-201ENST00000383863 107 ntBASIC0.68□□□□□ -2.3
HOXC6P09630 Y_RNA.620-201ENST00000411009 88 ntBASIC0.68□□□□□ -2.3
HOXC6P09630 RNU7-104P-201ENST00000459398 79 ntBASIC0.68□□□□□ -2.3
HOXC6P09630 RNU6-65P-201ENST00000516332 98 ntBASIC0.68□□□□□ -2.3
HOXC6P09630 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
HOXC6P09630 MIR494-201ENST00000349529 81 ntBASIC0.67□□□□□ -2.3
HOXC6P09630 SNORA36.1-201ENST00000363424 132 ntBASIC0.67□□□□□ -2.3
HOXC6P09630 RNU7-153P-201ENST00000516455 62 ntBASIC0.67□□□□□ -2.3
HOXC6P09630 RNA5SP47-201ENST00000517230 109 ntBASIC0.67□□□□□ -2.3
HOXC6P09630 MIR330-201ENST00000362196 94 ntBASIC0.66□□□□□ -2.3
HOXC6P09630 Y_RNA.30-201ENST00000362572 97 ntBASIC0.66□□□□□ -2.3
HOXC6P09630 Y_RNA.73-201ENST00000362910 113 ntBASIC0.66□□□□□ -2.3
HOXC6P09630 RNU6-716P-201ENST00000365621 103 ntBASIC0.66□□□□□ -2.3
HOXC6P09630 RNA5SP292-201ENST00000390974 118 ntBASIC0.66□□□□□ -2.3
HOXC6P09630 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
HOXC6P09630 RNU6-1265P-201ENST00000516342 103 ntBASIC0.66□□□□□ -2.3
HOXC6P09630 MIR4639-201ENST00000584938 69 ntBASIC0.66□□□□□ -2.3
HOXC6P09630 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.66□□□□□ -2.3
HOXC6P09630 Y_RNA.115-201ENST00000363272 98 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 RNU6-1229P-201ENST00000364295 107 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 Y_RNA.558-201ENST00000384685 113 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 RNU6-287P-201ENST00000516230 98 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 RNA5SP94-201ENST00000516917 108 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 MIR4696-201ENST00000581431 70 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 AC062037.1-201ENST00000605302 128 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 IGLL4P-201ENST00000614590 133 ntBASIC0.65□□□□□ -2.31
HOXC6P09630 RNU6-664P-201ENST00000362381 107 ntBASIC0.64□□□□□ -2.31
HOXC6P09630 RNU6-633P-201ENST00000362612 103 ntBASIC0.64□□□□□ -2.31
HOXC6P09630 RNY1P1-201ENST00000364372 112 ntBASIC0.64□□□□□ -2.31
HOXC6P09630 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
HOXC6P09630 Y_RNA.596-201ENST00000410462 109 ntBASIC0.64□□□□□ -2.31
HOXC6P09630 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.64□□□□□ -2.31
HOXC6P09630 MIR3920-201ENST00000581751 86 ntBASIC0.64□□□□□ -2.31
HOXC6P09630 AC067863.3-201ENST00000624172 122 ntBASIC0.64□□□□□ -2.31
HOXC6P09630 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HOXC6P09630 Y_RNA.207-201ENST00000364142 106 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 SNORD101-201ENST00000384027 73 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 MIR450A2-201ENST00000385022 100 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 SNORD90-201ENST00000391145 111 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 Y_RNA.611-201ENST00000410682 108 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.63□□□□□ -2.31
HOXC6P09630 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 RNU7-13P-201ENST00000516413 62 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 MIR548AG2-201ENST00000581228 64 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 MIR8087-201ENST00000612745 78 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 MIR548BB-201ENST00000626714 66 ntBASIC0.63□□□□□ -2.31
HOXC6P09630 RNU6-509P-201ENST00000363519 107 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 RNA5SP517-201ENST00000364724 117 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 Y_RNA.388-201ENST00000383919 113 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 RNU6-811P-201ENST00000384069 107 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 RNU6-675P-201ENST00000384236 104 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HOXC6P09630 SNORA18.5-201ENST00000516616 101 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 RNU6-135P-201ENST00000516769 101 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 MIR3064-201ENST00000581130 66 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 MTRNR2L2-201ENST00000604882 87 ntBASIC0.62□□□□□ -2.31
HOXC6P09630 RNU6-726P-201ENST00000364680 107 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 MIR519C-201ENST00000385053 87 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 MIR548L-201ENST00000408303 86 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 RNU6-1052P-201ENST00000411398 104 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.61□□□□□ -2.31
HOXC6P09630 RNU6-719P-201ENST00000516671 104 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 RNA5SP268-201ENST00000516828 124 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 SCARNA16.5-201ENST00000517114 183 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 AC104996.3-201ENST00000590718 94 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 AL109933.3-201ENST00000619095 188 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
HOXC6P09630 Y_RNA.239-201ENST00000364444 113 ntBASIC0.6□□□□□ -2.31
HOXC6P09630 RNU6-497P-201ENST00000365316 104 ntBASIC0.6□□□□□ -2.31
HOXC6P09630 MIR140-201ENST00000385282 100 ntBASIC0.6□□□□□ -2.31
HOXC6P09630 RNY4P29-201ENST00000410801 97 ntBASIC0.6□□□□□ -2.31
HOXC6P09630 RNU6-592P-201ENST00000411333 103 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms