Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC026421.1-201ENST00000519101 163 ntBASIC-2.75□□□□□ -2.85
TPM3P06753 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.76□□□□□ -2.85
TPM3P06753 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.76□□□□□ -2.85
TPM3P06753 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.77□□□□□ -2.85
TPM3P06753 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.77□□□□□ -2.85
TPM3P06753 SNORD116-4-201ENST00000384733 96 ntBASIC-2.77□□□□□ -2.85
TPM3P06753 MIR4320-201ENST00000636981 65 ntBASIC-2.77□□□□□ -2.85
TPM3P06753 MIR335-201ENST00000362173 94 ntBASIC-2.78□□□□□ -2.85
TPM3P06753 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.78□□□□□ -2.85
TPM3P06753 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.78□□□□□ -2.85
TPM3P06753 RNU6-65P-201ENST00000516332 98 ntBASIC-2.78□□□□□ -2.85
TPM3P06753 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.79□□□□□ -2.86
TPM3P06753 MIR548H3-201ENST00000408771 118 ntBASIC-2.79□□□□□ -2.86
TPM3P06753 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.79□□□□□ -2.86
TPM3P06753 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.79□□□□□ -2.86
TPM3P06753 MTND1P19-201ENST00000511780 315 ntBASIC-2.79□□□□□ -2.86
TPM3P06753 AC113195.1-201ENST00000579952 141 ntBASIC-2.79□□□□□ -2.86
TPM3P06753 SNORA63.2-201ENST00000362603 126 ntBASIC-2.8□□□□□ -2.86
TPM3P06753 RNU6-363P-201ENST00000362895 105 ntBASIC-2.81□□□□□ -2.86
TPM3P06753 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.81□□□□□ -2.86
TPM3P06753 MIR8485-201ENST00000401372 91 ntBASIC-2.81□□□□□ -2.86
TPM3P06753 SNORD57-201ENST00000448188 72 ntBASIC-2.81□□□□□ -2.86
TPM3P06753 MIR4536-1-201ENST00000583537 88 ntBASIC-2.81□□□□□ -2.86
TPM3P06753 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.82□□□□□ -2.86
TPM3P06753 RNY3P1-201ENST00000365085 102 ntBASIC-2.82□□□□□ -2.86
TPM3P06753 RNU7-24P-201ENST00000458867 62 ntBASIC-2.82□□□□□ -2.86
TPM3P06753 MIR4643-201ENST00000577473 78 ntBASIC-2.82□□□□□ -2.86
TPM3P06753 U6.106-201ENST00000636360 105 ntBASIC-2.82□□□□□ -2.86
TPM3P06753 MIR6844-201ENST00000637122 62 ntBASIC-2.82□□□□□ -2.86
TPM3P06753 MIR409-201ENST00000362237 79 ntBASIC-2.83□□□□□ -2.86
TPM3P06753 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.83□□□□□ -2.86
TPM3P06753 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.83□□□□□ -2.86
TPM3P06753 AC022028.1-201ENST00000412054 408 ntBASIC-2.83□□□□□ -2.86
TPM3P06753 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.83□□□□□ -2.86
TPM3P06753 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.84□□□□□ -2.86
TPM3P06753 MIR548A1-201ENST00000385041 97 ntBASIC-2.85□□□□□ -2.87
TPM3P06753 SNORD75.2-201ENST00000408784 58 ntBASIC-2.85□□□□□ -2.87
TPM3P06753 MIR3646-201ENST00000578301 84 ntBASIC-2.85□□□□□ -2.87
TPM3P06753 MIR369-201ENST00000362155 70 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 MIR759-201ENST00000390224 91 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 RNA5SP476-201ENST00000516613 103 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 MIR5591-201ENST00000578248 65 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 AL442128.1-201ENST00000615151 90 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-2.86□□□□□ -2.87
TPM3P06753 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.87□□□□□ -2.87
TPM3P06753 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.87□□□□□ -2.87
TPM3P06753 SNORD42.2-201ENST00000365570 69 ntBASIC-2.87□□□□□ -2.87
TPM3P06753 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.87□□□□□ -2.87
TPM3P06753 AC107027.2-201ENST00000512197 115 ntBASIC-2.87□□□□□ -2.87
TPM3P06753 RNA5SP461-201ENST00000516451 104 ntBASIC-2.87□□□□□ -2.87
TPM3P06753 MIR4770-201ENST00000579149 58 ntBASIC-2.87□□□□□ -2.87
TPM3P06753 MIR3140-201ENST00000583685 90 ntBASIC-2.87□□□□□ -2.87
TPM3P06753 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 SNORA24B-201ENST00000384176 131 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 MIR889-201ENST00000401280 79 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 MIR1255B2-201ENST00000408618 67 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 RNU2-51P-201ENST00000410708 197 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 AC139792.2-201ENST00000624218 587 ntBASIC-2.88□□□□□ -2.87
TPM3P06753 RNU6-409P-201ENST00000384114 104 ntBASIC-2.89□□□□□ -2.87
TPM3P06753 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.89□□□□□ -2.87
TPM3P06753 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.89□□□□□ -2.87
TPM3P06753 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.9□□□□□ -2.87
TPM3P06753 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.9□□□□□ -2.87
TPM3P06753 SNORD50.2-201ENST00000365465 70 ntBASIC-2.9□□□□□ -2.87
TPM3P06753 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.9□□□□□ -2.87
TPM3P06753 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.9□□□□□ -2.87
TPM3P06753 RNU6-988P-201ENST00000519081 107 ntBASIC-2.9□□□□□ -2.87
TPM3P06753 AC025521.1-201ENST00000621624 286 ntBASIC-2.9□□□□□ -2.87
TPM3P06753 RNA5SP26-201ENST00000362406 119 ntBASIC-2.91□□□□□ -2.88
TPM3P06753 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.91□□□□□ -2.88
TPM3P06753 RNY4P28-201ENST00000365281 93 ntBASIC-2.91□□□□□ -2.88
TPM3P06753 MIR548D2-201ENST00000384955 97 ntBASIC-2.91□□□□□ -2.88
TPM3P06753 AL353691.2-201ENST00000443795 59 ntBASIC-2.91□□□□□ -2.88
TPM3P06753 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.92□□□□□ -2.88
TPM3P06753 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.92□□□□□ -2.88
TPM3P06753 SNORD115-22-201ENST00000364456 82 ntBASIC-2.92□□□□□ -2.88
TPM3P06753 RNU6-132P-201ENST00000383863 107 ntBASIC-2.92□□□□□ -2.88
TPM3P06753 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.93□□□□□ -2.88
TPM3P06753 RNY1P11-201ENST00000363759 113 ntBASIC-2.93□□□□□ -2.88
TPM3P06753 RNU7-85P-201ENST00000458851 63 ntBASIC-2.93□□□□□ -2.88
TPM3P06753 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.94□□□□□ -2.88
TPM3P06753 RNU6-164P-201ENST00000364604 103 ntBASIC-2.94□□□□□ -2.88
TPM3P06753 SNORA33.1-201ENST00000364957 130 ntBASIC-2.94□□□□□ -2.88
TPM3P06753 MIR548U-201ENST00000390728 81 ntBASIC-2.94□□□□□ -2.88
TPM3P06753 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.94□□□□□ -2.88
TPM3P06753 AC091912.2-201ENST00000624798 167 ntBASIC-2.94□□□□□ -2.88
TPM3P06753 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.95□□□□□ -2.88
TPM3P06753 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.95□□□□□ -2.88
TPM3P06753 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.95□□□□□ -2.88
TPM3P06753 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.95□□□□□ -2.88
TPM3P06753 snoU13.17-201ENST00000458802 104 ntBASIC-2.95□□□□□ -2.88
TPM3P06753 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.96□□□□□ -2.88
TPM3P06753 CYP3A54P-201ENST00000566950 75 ntBASIC-2.96□□□□□ -2.88
TPM3P06753 MIR4520-1-201ENST00000582609 70 ntBASIC-2.96□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms