Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIRLET7A1-201ENST00000362295 80 ntBASIC1.42□□□□□ -2.18
PDGFAP04085 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
PDGFAP04085 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.42□□□□□ -2.18
PDGFAP04085 MIR573-201ENST00000384964 99 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 MIR451A-201ENST00000385059 72 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 MIR644A-201ENST00000385262 94 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 RNU7-104P-201ENST00000459398 79 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 RNU6-287P-201ENST00000516230 98 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 RNA5SP220-201ENST00000516298 104 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 RNU7-161P-201ENST00000517289 62 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 ZNF209P-201ENST00000593450 2304 ntBASIC1.41□□□□□ -2.18
PDGFAP04085 SNORD90-201ENST00000391145 111 ntBASIC1.4□□□□□ -2.19
PDGFAP04085 MIR4639-201ENST00000584938 69 ntBASIC1.4□□□□□ -2.19
PDGFAP04085 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
PDGFAP04085 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.4□□□□□ -2.19
PDGFAP04085 RNU6-1229P-201ENST00000364295 107 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 RNU6-1296P-201ENST00000383879 107 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 Y_RNA.540-201ENST00000384638 111 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 MIR618-201ENST00000385287 98 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 RNA5SP255-201ENST00000516370 107 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 RNA5SP102-201ENST00000516865 106 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
PDGFAP04085 MIR4452-201ENST00000583004 71 ntBASIC1.38□□□□□ -2.19
PDGFAP04085 AL078603.1-201ENST00000603824 313 ntBASIC1.38□□□□□ -2.19
PDGFAP04085 AC067863.3-201ENST00000624172 122 ntBASIC1.38□□□□□ -2.19
PDGFAP04085 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
PDGFAP04085 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
PDGFAP04085 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
PDGFAP04085 RNU6-776P-201ENST00000364403 104 ntBASIC1.37□□□□□ -2.19
PDGFAP04085 RNU6-1022P-201ENST00000365049 104 ntBASIC1.37□□□□□ -2.19
PDGFAP04085 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
PDGFAP04085 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
PDGFAP04085 MIR3612-201ENST00000579753 87 ntBASIC1.37□□□□□ -2.19
PDGFAP04085 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.37□□□□□ -2.19
PDGFAP04085 RNU6-1335P-201ENST00000365426 107 ntBASIC1.36□□□□□ -2.19
PDGFAP04085 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
PDGFAP04085 U3.27-201ENST00000391237 200 ntBASIC1.36□□□□□ -2.19
PDGFAP04085 MIR2113-201ENST00000459007 91 ntBASIC1.36□□□□□ -2.19
PDGFAP04085 RNU6-807P-201ENST00000516805 107 ntBASIC1.36□□□□□ -2.19
PDGFAP04085 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.36□□□□□ -2.19
PDGFAP04085 MIR3920-201ENST00000581751 86 ntBASIC1.36□□□□□ -2.19
PDGFAP04085 MIR3140-201ENST00000583685 90 ntBASIC1.36□□□□□ -2.19
PDGFAP04085 AC145423.2-201ENST00000610631 239 ntBASIC1.36□□□□□ -2.19
PDGFAP04085 RNU6-1126P-201ENST00000384002 107 ntBASIC1.35□□□□□ -2.19
PDGFAP04085 SNORD28-201ENST00000384706 75 ntBASIC1.35□□□□□ -2.19
PDGFAP04085 RNA5SP480-201ENST00000516840 109 ntBASIC1.35□□□□□ -2.19
PDGFAP04085 U7.4-201ENST00000614961 63 ntBASIC1.35□□□□□ -2.19
PDGFAP04085 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
PDGFAP04085 AC244669.1-204ENST00000621564 178 ntBASIC1.35□□□□□ -2.19
PDGFAP04085 MIR1297-201ENST00000637311 77 ntBASIC1.35□□□□□ -2.19
PDGFAP04085 SNORD114-22-201ENST00000365423 72 ntBASIC1.34□□□□□ -2.19
PDGFAP04085 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
PDGFAP04085 MIR216B-201ENST00000390186 82 ntBASIC1.34□□□□□ -2.19
PDGFAP04085 MIR3678-201ENST00000578455 94 ntBASIC1.34□□□□□ -2.19
PDGFAP04085 YWHAEP2-201ENST00000580066 112 ntBASIC1.34□□□□□ -2.19
PDGFAP04085 YWHAEP3-201ENST00000582767 121 ntBASIC1.34□□□□□ -2.19
PDGFAP04085 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PDGFAP04085 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
PDGFAP04085 MIR96-201ENST00000362288 78 ntBASIC1.33□□□□□ -2.2
PDGFAP04085 Y_RNA.12-201ENST00000362393 112 ntBASIC1.33□□□□□ -2.2
PDGFAP04085 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
PDGFAP04085 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
PDGFAP04085 MIR548L-201ENST00000408303 86 ntBASIC1.33□□□□□ -2.2
PDGFAP04085 snoU13.17-201ENST00000458802 104 ntBASIC1.33□□□□□ -2.2
PDGFAP04085 RNU7-74P-201ENST00000459104 62 ntBASIC1.33□□□□□ -2.2
PDGFAP04085 RNU6-303P-201ENST00000517091 106 ntBASIC1.33□□□□□ -2.2
PDGFAP04085 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
PDGFAP04085 SNORD114-26-201ENST00000363543 72 ntBASIC1.32□□□□□ -2.2
PDGFAP04085 MIR617-201ENST00000385030 97 ntBASIC1.32□□□□□ -2.2
PDGFAP04085 SNORD99-201ENST00000408612 74 ntBASIC1.32□□□□□ -2.2
PDGFAP04085 RNU6-1052P-201ENST00000411398 104 ntBASIC1.32□□□□□ -2.2
PDGFAP04085 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
PDGFAP04085 RNU6-719P-201ENST00000516671 104 ntBASIC1.32□□□□□ -2.2
PDGFAP04085 MIR6734-201ENST00000621166 68 ntBASIC1.32□□□□□ -2.2
PDGFAP04085 RNU4-45P-201ENST00000365469 141 ntBASIC1.31□□□□□ -2.2
PDGFAP04085 AC011195.1-201ENST00000578177 177 ntBASIC1.31□□□□□ -2.2
PDGFAP04085 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PDGFAP04085 RNU2-59P-201ENST00000410482 191 ntBASIC1.3□□□□□ -2.2
PDGFAP04085 AC097510.1-201ENST00000510945 133 ntBASIC1.3□□□□□ -2.2
PDGFAP04085 RNA5SP47-201ENST00000517230 109 ntBASIC1.3□□□□□ -2.2
PDGFAP04085 MIR548AG2-201ENST00000581228 64 ntBASIC1.3□□□□□ -2.2
PDGFAP04085 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.3□□□□□ -2.2
PDGFAP04085 RNU6-681P-201ENST00000364012 104 ntBASIC1.29□□□□□ -2.2
PDGFAP04085 SNORA24B-201ENST00000384176 131 ntBASIC1.29□□□□□ -2.2
PDGFAP04085 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.29□□□□□ -2.2
PDGFAP04085 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
PDGFAP04085 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
PDGFAP04085 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
PDGFAP04085 SNORD41.1-201ENST00000391000 69 ntBASIC1.28□□□□□ -2.2
PDGFAP04085 MIR889-201ENST00000401280 79 ntBASIC1.28□□□□□ -2.2
PDGFAP04085 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.28□□□□□ -2.2
PDGFAP04085 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
PDGFAP04085 Y_RNA.371-201ENST00000365591 113 ntBASIC1.27□□□□□ -2.21
PDGFAP04085 AC244098.3-201ENST00000424803 96 ntBASIC1.27□□□□□ -2.21
PDGFAP04085 SCARNA16.5-201ENST00000517114 183 ntBASIC1.27□□□□□ -2.21
PDGFAP04085 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
PDGFAP04085 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms