Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR6818-201ENST00000621576 65 ntBASIC-2.17□□□□□ -2.76
APOEP02649 AL512310.12-203ENST00000640543 90 ntBASIC-2.17□□□□□ -2.76
APOEP02649 AL353803.5-201ENST00000599815 141 ntBASIC-2.18□□□□□ -2.76
APOEP02649 SNORD38.1-201ENST00000363863 68 ntBASIC-2.19□□□□□ -2.76
APOEP02649 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.19□□□□□ -2.76
APOEP02649 MIR1468-201ENST00000410600 86 ntBASIC-2.19□□□□□ -2.76
APOEP02649 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.19□□□□□ -2.76
APOEP02649 AC107027.2-201ENST00000512197 115 ntBASIC-2.19□□□□□ -2.76
APOEP02649 FGF7P7-201ENST00000514120 227 ntBASIC-2.19□□□□□ -2.76
APOEP02649 AC068339.1-201ENST00000526965 141 ntBASIC-2.19□□□□□ -2.76
APOEP02649 AC108081.1-201ENST00000604358 221 ntBASIC-2.19□□□□□ -2.76
APOEP02649 MIR369-201ENST00000362155 70 ntBASIC-2.2□□□□□ -2.76
APOEP02649 RNU6-275P-201ENST00000364910 107 ntBASIC-2.2□□□□□ -2.76
APOEP02649 AC022028.1-201ENST00000412054 408 ntBASIC-2.2□□□□□ -2.76
APOEP02649 MIR6502-201ENST00000617296 76 ntBASIC-2.2□□□□□ -2.76
APOEP02649 AC021753.1-201ENST00000635724 168 ntBASIC-2.2□□□□□ -2.76
APOEP02649 U6.96-201ENST00000636425 70 ntBASIC-2.2□□□□□ -2.76
APOEP02649 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.21□□□□□ -2.76
APOEP02649 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.21□□□□□ -2.76
APOEP02649 RNU6-75P-201ENST00000515944 104 ntBASIC-2.21□□□□□ -2.76
APOEP02649 MIR4643-201ENST00000577473 78 ntBASIC-2.21□□□□□ -2.76
APOEP02649 AC090617.8-201ENST00000623339 167 ntBASIC-2.21□□□□□ -2.76
APOEP02649 RNU6-990P-201ENST00000364385 104 ntBASIC-2.22□□□□□ -2.76
APOEP02649 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.22□□□□□ -2.76
APOEP02649 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.22□□□□□ -2.76
APOEP02649 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.22□□□□□ -2.76
APOEP02649 RNU2-51P-201ENST00000410708 197 ntBASIC-2.22□□□□□ -2.76
APOEP02649 AC113195.1-201ENST00000579952 141 ntBASIC-2.22□□□□□ -2.76
APOEP02649 MIR3163-201ENST00000581592 73 ntBASIC-2.22□□□□□ -2.76
APOEP02649 MIR3149-201ENST00000584629 83 ntBASIC-2.22□□□□□ -2.76
APOEP02649 AL445584.3-201ENST00000617173 78 ntBASIC-2.22□□□□□ -2.76
APOEP02649 MIR6888-201ENST00000621977 67 ntBASIC-2.22□□□□□ -2.76
APOEP02649 SNORD18B-201ENST00000365659 72 ntBASIC-2.23□□□□□ -2.77
APOEP02649 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.23□□□□□ -2.77
APOEP02649 MIR1285-2-201ENST00000408311 88 ntBASIC-2.23□□□□□ -2.77
APOEP02649 AC021146.9-201ENST00000512503 156 ntBASIC-2.23□□□□□ -2.77
APOEP02649 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.24□□□□□ -2.77
APOEP02649 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.24□□□□□ -2.77
APOEP02649 SNORA75.5-201ENST00000391291 81 ntBASIC-2.24□□□□□ -2.77
APOEP02649 RNU4-61P-201ENST00000411243 107 ntBASIC-2.24□□□□□ -2.77
APOEP02649 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.24□□□□□ -2.77
APOEP02649 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.25□□□□□ -2.77
APOEP02649 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.25□□□□□ -2.77
APOEP02649 MIR4308-201ENST00000580634 81 ntBASIC-2.25□□□□□ -2.77
APOEP02649 U6.106-201ENST00000636360 105 ntBASIC-2.25□□□□□ -2.77
APOEP02649 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.26□□□□□ -2.77
APOEP02649 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.26□□□□□ -2.77
APOEP02649 RNU6-412P-201ENST00000516434 106 ntBASIC-2.26□□□□□ -2.77
APOEP02649 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.26□□□□□ -2.77
APOEP02649 AC139792.2-201ENST00000624218 587 ntBASIC-2.26□□□□□ -2.77
APOEP02649 AC091912.2-201ENST00000624798 167 ntBASIC-2.26□□□□□ -2.77
APOEP02649 RNU6-495P-201ENST00000362995 107 ntBASIC-2.27□□□□□ -2.77
APOEP02649 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.27□□□□□ -2.77
APOEP02649 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.27□□□□□ -2.77
APOEP02649 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.27□□□□□ -2.77
APOEP02649 MIR335-201ENST00000362173 94 ntBASIC-2.28□□□□□ -2.77
APOEP02649 RNY1P11-201ENST00000363759 113 ntBASIC-2.28□□□□□ -2.77
APOEP02649 RNU6-746P-201ENST00000384112 109 ntBASIC-2.28□□□□□ -2.77
APOEP02649 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.28□□□□□ -2.77
APOEP02649 MIR6844-201ENST00000637122 62 ntBASIC-2.28□□□□□ -2.77
APOEP02649 SNORD42.2-201ENST00000365570 69 ntBASIC-2.29□□□□□ -2.78
APOEP02649 MTND1P19-201ENST00000511780 315 ntBASIC-2.29□□□□□ -2.78
APOEP02649 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.29□□□□□ -2.78
APOEP02649 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.3□□□□□ -2.78
APOEP02649 SNORA2.1-201ENST00000363089 137 ntBASIC-2.3□□□□□ -2.78
APOEP02649 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.3□□□□□ -2.78
APOEP02649 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.3□□□□□ -2.78
APOEP02649 SNORD63.1-201ENST00000516178 80 ntBASIC-2.3□□□□□ -2.78
APOEP02649 MIR6874-201ENST00000635894 71 ntBASIC-2.3□□□□□ -2.78
APOEP02649 RNA5SP86-201ENST00000390869 98 ntBASIC-2.31□□□□□ -2.78
APOEP02649 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.31□□□□□ -2.78
APOEP02649 RNU6-65P-201ENST00000516332 98 ntBASIC-2.31□□□□□ -2.78
APOEP02649 RNU6-158P-201ENST00000517104 100 ntBASIC-2.31□□□□□ -2.78
APOEP02649 RNU6-363P-201ENST00000362895 105 ntBASIC-2.32□□□□□ -2.78
APOEP02649 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.32□□□□□ -2.78
APOEP02649 MIR759-201ENST00000390224 91 ntBASIC-2.32□□□□□ -2.78
APOEP02649 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.32□□□□□ -2.78
APOEP02649 MIR4536-1-201ENST00000583537 88 ntBASIC-2.32□□□□□ -2.78
APOEP02649 MIR3140-201ENST00000583685 90 ntBASIC-2.32□□□□□ -2.78
APOEP02649 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.33□□□□□ -2.78
APOEP02649 RNU6-540P-201ENST00000384622 101 ntBASIC-2.33□□□□□ -2.78
APOEP02649 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.33□□□□□ -2.78
APOEP02649 RNU6-988P-201ENST00000519081 107 ntBASIC-2.33□□□□□ -2.78
APOEP02649 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.34□□□□□ -2.78
APOEP02649 SNORA26.4-201ENST00000391188 123 ntBASIC-2.34□□□□□ -2.78
APOEP02649 MIR548H1-201ENST00000408610 102 ntBASIC-2.34□□□□□ -2.78
APOEP02649 SNORA63.2-201ENST00000362603 126 ntBASIC-2.35□□□□□ -2.79
APOEP02649 RNU6-924P-201ENST00000362926 108 ntBASIC-2.35□□□□□ -2.79
APOEP02649 SNORD115-33-201ENST00000363723 82 ntBASIC-2.35□□□□□ -2.79
APOEP02649 RNY4P28-201ENST00000365281 93 ntBASIC-2.35□□□□□ -2.79
APOEP02649 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.35□□□□□ -2.79
APOEP02649 MIR548H3-201ENST00000408771 118 ntBASIC-2.35□□□□□ -2.79
APOEP02649 RNU6-983P-201ENST00000516004 103 ntBASIC-2.35□□□□□ -2.79
APOEP02649 U6atac.1-201ENST00000616025 117 ntBASIC-2.35□□□□□ -2.79
APOEP02649 AC025521.1-201ENST00000621624 286 ntBASIC-2.35□□□□□ -2.79
APOEP02649 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.36□□□□□ -2.79
APOEP02649 SNORD18.1-201ENST00000363807 70 ntBASIC-2.36□□□□□ -2.79
APOEP02649 AL442128.1-201ENST00000615151 90 ntBASIC-2.36□□□□□ -2.79
APOEP02649 RNU6-875P-201ENST00000516488 106 ntBASIC-2.37□□□□□ -2.79
APOEP02649 MIR4795-201ENST00000584182 89 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms