Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU7-4P-201ENST00000516961 62 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 AL138825.1-201ENST00000618587 192 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 MT-TI-201ENST00000387365 69 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 FGF7P7-201ENST00000514120 227 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-382P-201ENST00000365181 106 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-132P-201ENST00000383863 107 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU2-38P-201ENST00000410856 79 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 MTND1P1-201ENST00000445453 368 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 MIR4748-201ENST00000578076 82 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-363P-201ENST00000362895 105 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 MTATP6P21-201ENST00000440681 189 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 MIR4790-201ENST00000577799 79 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 AC073869.6-201ENST00000640656 341 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 SNORD115-19-201ENST00000363098 82 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 SNORD115-18-201ENST00000363293 82 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 SNORD115-17-201ENST00000364612 82 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 RNU6-246P-201ENST00000384702 107 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 RNY4P9-201ENST00000363194 97 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 SNORA26.8-201ENST00000391306 124 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 MIR513C-201ENST00000401352 84 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 AC099799.1-201ENST00000439809 192 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 RNU6-264P-201ENST00000517134 104 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 RNU6-106P-201ENST00000384405 107 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 SNORD116-6-201ENST00000384711 96 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
SPTA1P02549 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 RNU6-807P-201ENST00000516805 107 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 MIR3064-201ENST00000581130 66 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 MIR3170-201ENST00000582699 77 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 AC093424.1-201ENST00000604999 338 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 RNU6-259P-201ENST00000383999 107 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
SPTA1P02549 MTND3P10-201ENST00000450967 341 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 RNY4P20-201ENST00000516678 93 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 AL442128.1-201ENST00000615151 90 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 RNU7-169P-201ENST00000459456 61 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 RNU6-120P-201ENST00000516077 103 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 SNORD116-25-201ENST00000516517 92 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 Z69908.1-201ENST00000622603 247 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 AC138305.3-201ENST00000624988 240 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 MIR548A3-201ENST00000385297 97 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 MTND4LP30-201ENST00000454092 297 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 AC009094.1-201ENST00000564443 426 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 AC037487.3-201ENST00000606668 112 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 snoU18.1-201ENST00000629629 71 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 AL606534.2-204ENST00000635008 178 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 MIR1255B1-201ENST00000636325 63 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 MIR548W-201ENST00000581970 74 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 MIR1321-201ENST00000637766 79 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 MIR548G-201ENST00000408442 89 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 AL118496.2-201ENST00000448300 230 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 SNORD116-1-201ENST00000384335 95 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 AL691482.2-201ENST00000457453 84 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 RNU6-307P-201ENST00000516743 106 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU6-101P-201ENST00000410323 104 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU6-248P-201ENST00000410720 107 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.77□□□□□ -2.69
SPTA1P02549 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU7-6P-201ENST00000516845 62 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 AL137067.1-201ENST00000615933 120 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU5F-1-201ENST00000362507 117 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 247.5 ms