Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU7-4P-201ENST00000516961 62 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 AL138825.1-201ENST00000618587 192 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 MT-TI-201ENST00000387365 69 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 FGF7P7-201ENST00000514120 227 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-382P-201ENST00000365181 106 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-132P-201ENST00000383863 107 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU2-38P-201ENST00000410856 79 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 MTND1P1-201ENST00000445453 368 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 MIR4748-201ENST00000578076 82 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 RNU6-363P-201ENST00000362895 105 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 MTATP6P21-201ENST00000440681 189 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 MIR4790-201ENST00000577799 79 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 AC073869.6-201ENST00000640656 341 ntBASIC-1.71□□□□□ -2.68
SPTA1P02549 SNORD115-19-201ENST00000363098 82 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 SNORD115-18-201ENST00000363293 82 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 SNORD115-17-201ENST00000364612 82 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 RNU6-246P-201ENST00000384702 107 ntBASIC-1.72□□□□□ -2.68
SPTA1P02549 RNY4P9-201ENST00000363194 97 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 SNORA26.8-201ENST00000391306 124 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 MIR513C-201ENST00000401352 84 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 AC099799.1-201ENST00000439809 192 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 RNU6-264P-201ENST00000517134 104 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.72□□□□□ -2.69
SPTA1P02549 RNU6-106P-201ENST00000384405 107 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 SNORD116-6-201ENST00000384711 96 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
SPTA1P02549 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 RNU6-807P-201ENST00000516805 107 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 MIR3064-201ENST00000581130 66 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 MIR3170-201ENST00000582699 77 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 AC093424.1-201ENST00000604999 338 ntBASIC-1.73□□□□□ -2.69
SPTA1P02549 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 RNU6-259P-201ENST00000383999 107 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
SPTA1P02549 MTND3P10-201ENST00000450967 341 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 RNY4P20-201ENST00000516678 93 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 AL442128.1-201ENST00000615151 90 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 RNU7-169P-201ENST00000459456 61 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 RNU6-120P-201ENST00000516077 103 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 SNORD116-25-201ENST00000516517 92 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 Z69908.1-201ENST00000622603 247 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 AC138305.3-201ENST00000624988 240 ntBASIC-1.74□□□□□ -2.69
SPTA1P02549 MIR548A3-201ENST00000385297 97 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 MTND4LP30-201ENST00000454092 297 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 AC009094.1-201ENST00000564443 426 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 AC037487.3-201ENST00000606668 112 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 snoU18.1-201ENST00000629629 71 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 AL606534.2-204ENST00000635008 178 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 MIR1255B1-201ENST00000636325 63 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 MIR548W-201ENST00000581970 74 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 MIR1321-201ENST00000637766 79 ntBASIC-1.75□□□□□ -2.69
SPTA1P02549 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 MIR548G-201ENST00000408442 89 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 AL118496.2-201ENST00000448300 230 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 SNORD116-1-201ENST00000384335 95 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 AL691482.2-201ENST00000457453 84 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 RNU6-307P-201ENST00000516743 106 ntBASIC-1.76□□□□□ -2.69
SPTA1P02549 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU6-101P-201ENST00000410323 104 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU6-248P-201ENST00000410720 107 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.77□□□□□ -2.69
SPTA1P02549 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU7-6P-201ENST00000516845 62 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 AL137067.1-201ENST00000615933 120 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU5F-1-201ENST00000362507 117 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms