Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Y_RNA.68-201ENST00000362881 102 ntBASIC0.82□□□□□ -2.28
LDLRP01130 RNU4-32P-201ENST00000363404 141 ntBASIC0.82□□□□□ -2.28
LDLRP01130 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
LDLRP01130 RNU6-291P-201ENST00000384720 107 ntBASIC0.82□□□□□ -2.28
LDLRP01130 RNA5SP292-201ENST00000390974 118 ntBASIC0.82□□□□□ -2.28
LDLRP01130 RNU6-243P-201ENST00000391140 107 ntBASIC0.82□□□□□ -2.28
LDLRP01130 MIR938-201ENST00000401216 83 ntBASIC0.82□□□□□ -2.28
LDLRP01130 AC093729.1-201ENST00000513074 128 ntBASIC0.82□□□□□ -2.28
LDLRP01130 Y_RNA.681-201ENST00000516445 113 ntBASIC0.82□□□□□ -2.28
LDLRP01130 Y_RNA.697-201ENST00000516776 113 ntBASIC0.82□□□□□ -2.28
LDLRP01130 MIR548H5-201ENST00000580314 60 ntBASIC0.82□□□□□ -2.28
LDLRP01130 Y_RNA.94-201ENST00000363068 106 ntBASIC0.81□□□□□ -2.28
LDLRP01130 Y_RNA.316-201ENST00000365118 111 ntBASIC0.81□□□□□ -2.28
LDLRP01130 MIR1827-201ENST00000408549 66 ntBASIC0.81□□□□□ -2.28
LDLRP01130 Y_RNA.607-201ENST00000410597 98 ntBASIC0.81□□□□□ -2.28
LDLRP01130 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.81□□□□□ -2.28
LDLRP01130 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
LDLRP01130 RNU6-638P-201ENST00000516582 104 ntBASIC0.81□□□□□ -2.28
LDLRP01130 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
LDLRP01130 AL136317.1-201ENST00000612653 226 ntBASIC0.81□□□□□ -2.28
LDLRP01130 RNU6-1260P-201ENST00000362944 107 ntBASIC0.8□□□□□ -2.28
LDLRP01130 RNU6-652P-201ENST00000365488 107 ntBASIC0.8□□□□□ -2.28
LDLRP01130 SNORD90-201ENST00000391145 111 ntBASIC0.8□□□□□ -2.28
LDLRP01130 RNU6-279P-201ENST00000391297 101 ntBASIC0.8□□□□□ -2.28
LDLRP01130 MIR1236-201ENST00000408340 102 ntBASIC0.8□□□□□ -2.28
LDLRP01130 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
LDLRP01130 Y_RNA.809-201ENST00000516058 95 ntBASIC0.8□□□□□ -2.28
LDLRP01130 SNORA25.13-201ENST00000516395 103 ntBASIC0.8□□□□□ -2.28
LDLRP01130 RNU6-977P-201ENST00000516411 103 ntBASIC0.8□□□□□ -2.28
LDLRP01130 MIR3064-201ENST00000581130 66 ntBASIC0.8□□□□□ -2.28
LDLRP01130 MIR4536-1-201ENST00000583537 88 ntBASIC0.8□□□□□ -2.28
LDLRP01130 MIR924-201ENST00000638017 53 ntBASIC0.8□□□□□ -2.28
LDLRP01130 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LDLRP01130 RNU6-624P-201ENST00000363411 107 ntBASIC0.79□□□□□ -2.28
LDLRP01130 SNORD114-23-201ENST00000363536 72 ntBASIC0.79□□□□□ -2.28
LDLRP01130 RNU6-364P-201ENST00000384387 107 ntBASIC0.79□□□□□ -2.28
LDLRP01130 RNU6-535P-201ENST00000384722 107 ntBASIC0.79□□□□□ -2.28
LDLRP01130 MIR936-201ENST00000401264 98 ntBASIC0.79□□□□□ -2.28
LDLRP01130 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
LDLRP01130 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
LDLRP01130 RNA5SP330-201ENST00000517096 96 ntBASIC0.79□□□□□ -2.28
LDLRP01130 uc_338.16-201ENST00000621804 95 ntBASIC0.79□□□□□ -2.28
LDLRP01130 AC010487.4-201ENST00000637027 61 ntBASIC0.79□□□□□ -2.28
LDLRP01130 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.79□□□□□ -2.28
LDLRP01130 MIRLET7F1-201ENST00000362202 87 ntBASIC0.78□□□□□ -2.28
LDLRP01130 Y_RNA.32-201ENST00000362589 110 ntBASIC0.78□□□□□ -2.28
LDLRP01130 RNU6-478P-201ENST00000363904 110 ntBASIC0.78□□□□□ -2.28
LDLRP01130 MIR520F-201ENST00000384824 87 ntBASIC0.78□□□□□ -2.28
LDLRP01130 RNU6-65P-201ENST00000516332 98 ntBASIC0.78□□□□□ -2.28
LDLRP01130 SNORA18.5-201ENST00000516616 101 ntBASIC0.78□□□□□ -2.28
LDLRP01130 SNORA31.14-201ENST00000516728 116 ntBASIC0.78□□□□□ -2.28
LDLRP01130 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.78□□□□□ -2.28
LDLRP01130 AC025627.3-201ENST00000582078 182 ntBASIC0.78□□□□□ -2.28
LDLRP01130 AC104996.3-201ENST00000590718 94 ntBASIC0.78□□□□□ -2.28
LDLRP01130 RNU7-10P-201ENST00000607194 63 ntBASIC0.78□□□□□ -2.28
LDLRP01130 TRDV1-202ENST00000621643 102 ntBASIC0.78□□□□□ -2.28
LDLRP01130 U6.100-201ENST00000636230 99 ntBASIC0.78□□□□□ -2.28
LDLRP01130 RNU6-811P-201ENST00000384069 107 ntBASIC0.77□□□□□ -2.29
LDLRP01130 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
LDLRP01130 MIR599-201ENST00000385069 95 ntBASIC0.77□□□□□ -2.29
LDLRP01130 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
LDLRP01130 SNORD105-201ENST00000386910 85 ntBASIC0.77□□□□□ -2.29
LDLRP01130 RNU6-466P-201ENST00000391224 103 ntBASIC0.77□□□□□ -2.29
LDLRP01130 AL450471.1-201ENST00000447509 127 ntBASIC0.77□□□□□ -2.29
LDLRP01130 AC097635.1-201ENST00000450678 155 ntBASIC0.77□□□□□ -2.29
LDLRP01130 AC244505.6-201ENST00000452829 130 ntBASIC0.77□□□□□ -2.29
LDLRP01130 RNU6-857P-201ENST00000515893 110 ntBASIC0.77□□□□□ -2.29
LDLRP01130 RNU6-1265P-201ENST00000516342 103 ntBASIC0.77□□□□□ -2.29
LDLRP01130 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
LDLRP01130 AC138869.1-201ENST00000568623 124 ntBASIC0.77□□□□□ -2.29
LDLRP01130 MIR4796-201ENST00000580742 81 ntBASIC0.77□□□□□ -2.29
LDLRP01130 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
LDLRP01130 MTRNR2L2-201ENST00000604882 87 ntBASIC0.77□□□□□ -2.29
LDLRP01130 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
LDLRP01130 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
LDLRP01130 Y_RNA.258-201ENST00000364613 105 ntBASIC0.76□□□□□ -2.29
LDLRP01130 Y_RNA.433-201ENST00000384089 102 ntBASIC0.76□□□□□ -2.29
LDLRP01130 RNU1-119P-201ENST00000391122 165 ntBASIC0.76□□□□□ -2.29
LDLRP01130 MIR4696-201ENST00000581431 70 ntBASIC0.76□□□□□ -2.29
LDLRP01130 MIR4712-201ENST00000583750 82 ntBASIC0.76□□□□□ -2.29
LDLRP01130 AL353765.1-201ENST00000605514 183 ntBASIC0.76□□□□□ -2.29
LDLRP01130 AL109933.3-201ENST00000619095 188 ntBASIC0.76□□□□□ -2.29
LDLRP01130 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
LDLRP01130 Y_RNA.221-201ENST00000364248 96 ntBASIC0.75□□□□□ -2.29
LDLRP01130 Y_RNA.244-201ENST00000364484 109 ntBASIC0.75□□□□□ -2.29
LDLRP01130 Y_RNA.491-201ENST00000384417 107 ntBASIC0.75□□□□□ -2.29
LDLRP01130 MIR520H-201ENST00000385126 88 ntBASIC0.75□□□□□ -2.29
LDLRP01130 AC011195.1-201ENST00000578177 177 ntBASIC0.75□□□□□ -2.29
LDLRP01130 RNA5SP257-201ENST00000363023 116 ntBASIC0.74□□□□□ -2.29
LDLRP01130 SNORD115-37-201ENST00000363768 82 ntBASIC0.74□□□□□ -2.29
LDLRP01130 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LDLRP01130 AC002350.1-201ENST00000490759 375 ntBASIC0.74□□□□□ -2.29
LDLRP01130 RNU6-664P-201ENST00000362381 107 ntBASIC0.73□□□□□ -2.29
LDLRP01130 SNORA63.2-201ENST00000362603 126 ntBASIC0.73□□□□□ -2.29
LDLRP01130 RNU6-24P-201ENST00000384440 107 ntBASIC0.73□□□□□ -2.29
LDLRP01130 RNU6-129P-201ENST00000391022 107 ntBASIC0.73□□□□□ -2.29
LDLRP01130 snoU13.17-201ENST00000458802 104 ntBASIC0.73□□□□□ -2.29
LDLRP01130 RNA5SP121-201ENST00000516537 101 ntBASIC0.73□□□□□ -2.29
LDLRP01130 RNU6-557P-201ENST00000516842 110 ntBASIC0.73□□□□□ -2.29
LDLRP01130 RNU7-161P-201ENST00000517289 62 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 771.6 ms