Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
FOXN1O15353 snoU13.17-201ENST00000458802 104 ntBASIC1.32□□□□□ -2.2
FOXN1O15353 Y_RNA.697-201ENST00000516776 113 ntBASIC1.32□□□□□ -2.2
FOXN1O15353 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.32□□□□□ -2.2
FOXN1O15353 TRDV1-202ENST00000621643 102 ntBASIC1.32□□□□□ -2.2
FOXN1O15353 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
FOXN1O15353 RNU6-208P-201ENST00000362431 107 ntBASIC1.31□□□□□ -2.2
FOXN1O15353 Y_RNA.363-201ENST00000365529 113 ntBASIC1.31□□□□□ -2.2
FOXN1O15353 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
FOXN1O15353 MIR519A1-201ENST00000385257 85 ntBASIC1.31□□□□□ -2.2
FOXN1O15353 MIR4771-2-201ENST00000577758 74 ntBASIC1.31□□□□□ -2.2
FOXN1O15353 MIR3973-201ENST00000579824 107 ntBASIC1.31□□□□□ -2.2
FOXN1O15353 MIR4771-1-201ENST00000582617 74 ntBASIC1.31□□□□□ -2.2
FOXN1O15353 RNU6-1260P-201ENST00000362944 107 ntBASIC1.3□□□□□ -2.2
FOXN1O15353 MIR125B2-201ENST00000385128 89 ntBASIC1.3□□□□□ -2.2
FOXN1O15353 RNU6-448P-201ENST00000517052 107 ntBASIC1.3□□□□□ -2.2
FOXN1O15353 MIR4714-201ENST00000580728 77 ntBASIC1.3□□□□□ -2.2
FOXN1O15353 RNU7-10P-201ENST00000607194 63 ntBASIC1.3□□□□□ -2.2
FOXN1O15353 MIR6513-201ENST00000621188 64 ntBASIC1.3□□□□□ -2.2
FOXN1O15353 Y_RNA.42-201ENST00000362660 108 ntBASIC1.29□□□□□ -2.2
FOXN1O15353 RNU6-1051P-201ENST00000365471 102 ntBASIC1.29□□□□□ -2.2
FOXN1O15353 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
FOXN1O15353 RNU6-765P-201ENST00000516916 99 ntBASIC1.29□□□□□ -2.2
FOXN1O15353 RNU7-156P-201ENST00000517214 74 ntBASIC1.29□□□□□ -2.2
FOXN1O15353 AC023827.1-201ENST00000569247 97 ntBASIC1.29□□□□□ -2.2
FOXN1O15353 U6.100-201ENST00000636230 99 ntBASIC1.29□□□□□ -2.2
FOXN1O15353 RNA5SP245-201ENST00000364239 121 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 Y_RNA.264-201ENST00000364665 102 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 MIR936-201ENST00000401264 98 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 MIR1197-201ENST00000408818 88 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 AC114801.3-201ENST00000510231 177 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 RN7SKP88-201ENST00000516847 250 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 MIR4696-201ENST00000581431 70 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 7SK.8-201ENST00000612110 250 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 7SK.11-201ENST00000615477 250 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 7SK.13-201ENST00000622040 250 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 MIR664A-201ENST00000626086 82 ntBASIC1.28□□□□□ -2.2
FOXN1O15353 MIR330-201ENST00000362196 94 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 RNU6-664P-201ENST00000362381 107 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 Y_RNA.12-201ENST00000362393 112 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 Y_RNA.239-201ENST00000364444 113 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 RNU6-411P-201ENST00000384451 107 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 RPS26P5-201ENST00000418544 335 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 RNU6-70P-201ENST00000516438 60 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 RNU6-807P-201ENST00000516805 107 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 RNU6-1015P-201ENST00000517121 99 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 MIR4676-201ENST00000583078 72 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 MIR3140-201ENST00000583685 90 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
FOXN1O15353 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
FOXN1O15353 Y_RNA.207-201ENST00000364142 106 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 VTRNA1-3-201ENST00000365645 89 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 SNORD101-201ENST00000384027 73 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 MIR599-201ENST00000385069 95 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
FOXN1O15353 AC074348.1-201ENST00000426503 132 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 AC097635.1-201ENST00000450678 155 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 RNU6-303P-201ENST00000517091 106 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 YWHAEP2-201ENST00000580066 112 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 YWHAEP3-201ENST00000582767 121 ntBASIC1.26□□□□□ -2.21
FOXN1O15353 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
FOXN1O15353 RNU6-369P-201ENST00000362515 102 ntBASIC1.25□□□□□ -2.21
FOXN1O15353 RNU6-291P-201ENST00000384720 107 ntBASIC1.25□□□□□ -2.21
FOXN1O15353 RNU6-535P-201ENST00000384722 107 ntBASIC1.25□□□□□ -2.21
FOXN1O15353 AC138907.6-201ENST00000568401 126 ntBASIC1.25□□□□□ -2.21
FOXN1O15353 AC138869.1-201ENST00000568623 124 ntBASIC1.25□□□□□ -2.21
FOXN1O15353 MTRNR2L2-201ENST00000604882 87 ntBASIC1.25□□□□□ -2.21
FOXN1O15353 MIR1297-201ENST00000637311 77 ntBASIC1.25□□□□□ -2.21
FOXN1O15353 RNU6-364P-201ENST00000384387 107 ntBASIC1.24□□□□□ -2.21
FOXN1O15353 RNU6-1052P-201ENST00000411398 104 ntBASIC1.24□□□□□ -2.21
FOXN1O15353 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.24□□□□□ -2.21
FOXN1O15353 RNU7-21P-201ENST00000459430 62 ntBASIC1.24□□□□□ -2.21
FOXN1O15353 RNU6-687P-201ENST00000516443 89 ntBASIC1.24□□□□□ -2.21
FOXN1O15353 RNU6-719P-201ENST00000516671 104 ntBASIC1.24□□□□□ -2.21
FOXN1O15353 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.24□□□□□ -2.21
FOXN1O15353 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
FOXN1O15353 RNU6-330P-201ENST00000363015 107 ntBASIC1.23□□□□□ -2.21
FOXN1O15353 Y_RNA.371-201ENST00000365591 113 ntBASIC1.23□□□□□ -2.21
FOXN1O15353 RNU6-910P-201ENST00000390844 107 ntBASIC1.23□□□□□ -2.21
FOXN1O15353 MIR938-201ENST00000401216 83 ntBASIC1.23□□□□□ -2.21
FOXN1O15353 Y_RNA.596-201ENST00000410462 109 ntBASIC1.23□□□□□ -2.21
FOXN1O15353 RNU7-102P-201ENST00000458948 62 ntBASIC1.23□□□□□ -2.21
FOXN1O15353 AC008608.1-201ENST00000603910 127 ntBASIC1.23□□□□□ -2.21
FOXN1O15353 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
FOXN1O15353 RNU5F-1-201ENST00000362507 117 ntBASIC1.22□□□□□ -2.21
FOXN1O15353 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
FOXN1O15353 MIR4804-201ENST00000581683 73 ntBASIC1.22□□□□□ -2.21
FOXN1O15353 RNU6-340P-201ENST00000364005 107 ntBASIC1.21□□□□□ -2.22
FOXN1O15353 RNY4P3-201ENST00000365254 95 ntBASIC1.21□□□□□ -2.22
FOXN1O15353 SNORA80D-201ENST00000384488 135 ntBASIC1.21□□□□□ -2.22
FOXN1O15353 RNU7-56P-201ENST00000458744 62 ntBASIC1.21□□□□□ -2.22
FOXN1O15353 RNU6-1265P-201ENST00000516342 103 ntBASIC1.21□□□□□ -2.22
FOXN1O15353 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
FOXN1O15353 MIR6857-201ENST00000613267 93 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms