Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MIR644A-201ENST00000385262 94 ntBASIC1.14□□□□□ -2.23
SHOXO15266 MIR1255A-201ENST00000408338 113 ntBASIC1.14□□□□□ -2.23
SHOXO15266 RNU7-104P-201ENST00000459398 79 ntBASIC1.14□□□□□ -2.23
SHOXO15266 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.14□□□□□ -2.23
SHOXO15266 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
SHOXO15266 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.14□□□□□ -2.23
SHOXO15266 SNORA7.1-201ENST00000363750 139 ntBASIC1.13□□□□□ -2.23
SHOXO15266 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
SHOXO15266 RNU6-1335P-201ENST00000365426 107 ntBASIC1.13□□□□□ -2.23
SHOXO15266 RNU6-787P-201ENST00000384032 107 ntBASIC1.13□□□□□ -2.23
SHOXO15266 MIR1276-201ENST00000408707 83 ntBASIC1.13□□□□□ -2.23
SHOXO15266 RNU7-74P-201ENST00000459104 62 ntBASIC1.13□□□□□ -2.23
SHOXO15266 RNU7-95P-201ENST00000459222 64 ntBASIC1.13□□□□□ -2.23
SHOXO15266 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.13□□□□□ -2.23
SHOXO15266 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.13□□□□□ -2.23
SHOXO15266 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.13□□□□□ -2.23
SHOXO15266 AC067863.3-201ENST00000624172 122 ntBASIC1.13□□□□□ -2.23
SHOXO15266 RNU6-315P-201ENST00000362666 107 ntBASIC1.12□□□□□ -2.23
SHOXO15266 RNU6-624P-201ENST00000363411 107 ntBASIC1.12□□□□□ -2.23
SHOXO15266 SNORD114-26-201ENST00000363543 72 ntBASIC1.12□□□□□ -2.23
SHOXO15266 Y_RNA.264-201ENST00000364665 102 ntBASIC1.12□□□□□ -2.23
SHOXO15266 Y_RNA.313-201ENST00000365095 103 ntBASIC1.12□□□□□ -2.23
SHOXO15266 RNU6-279P-201ENST00000391297 101 ntBASIC1.12□□□□□ -2.23
SHOXO15266 SNORD99-201ENST00000408612 74 ntBASIC1.12□□□□□ -2.23
SHOXO15266 RNU6-557P-201ENST00000516842 110 ntBASIC1.12□□□□□ -2.23
SHOXO15266 RNU7-161P-201ENST00000517289 62 ntBASIC1.12□□□□□ -2.23
SHOXO15266 AC011195.1-201ENST00000578177 177 ntBASIC1.12□□□□□ -2.23
SHOXO15266 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.12□□□□□ -2.23
SHOXO15266 ZNF209P-201ENST00000593450 2304 ntBASIC1.12□□□□□ -2.23
SHOXO15266 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SHOXO15266 Y_RNA.207-201ENST00000364142 106 ntBASIC1.11□□□□□ -2.23
SHOXO15266 SNORD28-201ENST00000384706 75 ntBASIC1.11□□□□□ -2.23
SHOXO15266 MIR216B-201ENST00000390186 82 ntBASIC1.11□□□□□ -2.23
SHOXO15266 MIR548L-201ENST00000408303 86 ntBASIC1.11□□□□□ -2.23
SHOXO15266 RNU6-638P-201ENST00000516582 104 ntBASIC1.11□□□□□ -2.23
SHOXO15266 MIR3678-201ENST00000578455 94 ntBASIC1.11□□□□□ -2.23
SHOXO15266 MIR6515-201ENST00000619843 57 ntBASIC1.11□□□□□ -2.23
SHOXO15266 SNORD77.2-201ENST00000391045 68 ntBASIC1.1□□□□□ -2.23
SHOXO15266 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.1□□□□□ -2.23
SHOXO15266 RNU6-287P-201ENST00000516230 98 ntBASIC1.1□□□□□ -2.23
SHOXO15266 AC244669.1-204ENST00000621564 178 ntBASIC1.1□□□□□ -2.23
SHOXO15266 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.1□□□□□ -2.23
SHOXO15266 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
SHOXO15266 SNORA63.2-201ENST00000362603 126 ntBASIC1.09□□□□□ -2.23
SHOXO15266 SNORD18A-201ENST00000363753 72 ntBASIC1.09□□□□□ -2.23
SHOXO15266 RNU6-1051P-201ENST00000365471 102 ntBASIC1.09□□□□□ -2.23
SHOXO15266 MIR451A-201ENST00000385059 72 ntBASIC1.09□□□□□ -2.23
SHOXO15266 U3.27-201ENST00000391237 200 ntBASIC1.09□□□□□ -2.23
SHOXO15266 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
SHOXO15266 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
SHOXO15266 MIR4303-201ENST00000581299 66 ntBASIC1.09□□□□□ -2.23
SHOXO15266 MIR4712-201ENST00000583750 82 ntBASIC1.09□□□□□ -2.23
SHOXO15266 RNU6-1126P-201ENST00000384002 107 ntBASIC1.08□□□□□ -2.24
SHOXO15266 RNU6-24P-201ENST00000384440 107 ntBASIC1.08□□□□□ -2.24
SHOXO15266 AC244098.3-201ENST00000424803 96 ntBASIC1.08□□□□□ -2.24
SHOXO15266 AL450471.1-201ENST00000447509 127 ntBASIC1.08□□□□□ -2.24
SHOXO15266 RNU1-123P-201ENST00000458950 160 ntBASIC1.08□□□□□ -2.24
SHOXO15266 AL353765.1-201ENST00000605514 183 ntBASIC1.08□□□□□ -2.24
SHOXO15266 RNU6-686P-201ENST00000364839 107 ntBASIC1.07□□□□□ -2.24
SHOXO15266 RNA5SP225-201ENST00000410874 135 ntBASIC1.07□□□□□ -2.24
SHOXO15266 MIR2113-201ENST00000459007 91 ntBASIC1.07□□□□□ -2.24
SHOXO15266 RNU6-857P-201ENST00000515893 110 ntBASIC1.07□□□□□ -2.24
SHOXO15266 SCARNA16.5-201ENST00000517114 183 ntBASIC1.07□□□□□ -2.24
SHOXO15266 RNA5SP47-201ENST00000517230 109 ntBASIC1.07□□□□□ -2.24
SHOXO15266 MIR3920-201ENST00000581751 86 ntBASIC1.07□□□□□ -2.24
SHOXO15266 MIR18A-201ENST00000362310 71 ntBASIC1.06□□□□□ -2.24
SHOXO15266 RNU6-1094P-201ENST00000362416 104 ntBASIC1.06□□□□□ -2.24
SHOXO15266 RNU6-208P-201ENST00000362431 107 ntBASIC1.06□□□□□ -2.24
SHOXO15266 MIR617-201ENST00000385030 97 ntBASIC1.06□□□□□ -2.24
SHOXO15266 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
SHOXO15266 AL353770.2-201ENST00000620024 78 ntBASIC1.06□□□□□ -2.24
SHOXO15266 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
SHOXO15266 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
SHOXO15266 MIR4421-201ENST00000578133 69 ntBASIC1.05□□□□□ -2.24
SHOXO15266 RNU6-161P-201ENST00000363051 106 ntBASIC1.04□□□□□ -2.24
SHOXO15266 SNORD41.1-201ENST00000391000 69 ntBASIC1.04□□□□□ -2.24
SHOXO15266 RNU6-1108P-201ENST00000516308 104 ntBASIC1.04□□□□□ -2.24
SHOXO15266 RNA5SP395-201ENST00000516567 118 ntBASIC1.04□□□□□ -2.24
SHOXO15266 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
SHOXO15266 RNA5SP325-201ENST00000363756 130 ntBASIC1.03□□□□□ -2.24
SHOXO15266 RNA5SP222-201ENST00000411039 105 ntBASIC1.03□□□□□ -2.24
SHOXO15266 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.03□□□□□ -2.24
SHOXO15266 MIR6779-201ENST00000617283 64 ntBASIC1.03□□□□□ -2.24
SHOXO15266 RNU6-478P-201ENST00000363904 110 ntBASIC1.02□□□□□ -2.25
SHOXO15266 AC004223.1-201ENST00000479840 271 ntBASIC1.02□□□□□ -2.25
SHOXO15266 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SHOXO15266 MIRLET7A1-201ENST00000362295 80 ntBASIC1.01□□□□□ -2.25
SHOXO15266 Y_RNA.94-201ENST00000363068 106 ntBASIC1.01□□□□□ -2.25
SHOXO15266 SNORD114-22-201ENST00000365423 72 ntBASIC1.01□□□□□ -2.25
SHOXO15266 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
SHOXO15266 RNU6-807P-201ENST00000516805 107 ntBASIC1.01□□□□□ -2.25
SHOXO15266 RNU6-1223P-201ENST00000517124 104 ntBASIC1.01□□□□□ -2.25
SHOXO15266 SNORA40.6-201ENST00000391153 128 ntBASIC1□□□□□ -2.25
SHOXO15266 RNA5SP227-201ENST00000516184 113 ntBASIC1□□□□□ -2.25
SHOXO15266 MIR1297-201ENST00000637311 77 ntBASIC1□□□□□ -2.25
SHOXO15266 RNU6-726P-201ENST00000364680 107 ntBASIC0.99□□□□□ -2.25
SHOXO15266 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
SHOXO15266 RNU6-716P-201ENST00000365621 103 ntBASIC0.99□□□□□ -2.25
SHOXO15266 SNORD90-201ENST00000391145 111 ntBASIC0.99□□□□□ -2.25
SHOXO15266 RNU2-59P-201ENST00000410482 191 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms