Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
PALM3A6NDB9 MIR451A-201ENST00000385059 72 ntBASIC1.58□□□□□ -2.16
PALM3A6NDB9 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
PALM3A6NDB9 RNU6-287P-201ENST00000516230 98 ntBASIC1.58□□□□□ -2.16
PALM3A6NDB9 MIR3140-201ENST00000583685 90 ntBASIC1.58□□□□□ -2.16
PALM3A6NDB9 MIR644A-201ENST00000385262 94 ntBASIC1.57□□□□□ -2.16
PALM3A6NDB9 snoU13.17-201ENST00000458802 104 ntBASIC1.57□□□□□ -2.16
PALM3A6NDB9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.57□□□□□ -2.16
PALM3A6NDB9 RNU6-469P-201ENST00000516253 101 ntBASIC1.57□□□□□ -2.16
PALM3A6NDB9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.57□□□□□ -2.16
PALM3A6NDB9 RNA5SP403-201ENST00000363598 108 ntBASIC1.56□□□□□ -2.16
PALM3A6NDB9 MIR499A-201ENST00000384903 122 ntBASIC1.56□□□□□ -2.16
PALM3A6NDB9 RNU6-1052P-201ENST00000411398 104 ntBASIC1.56□□□□□ -2.16
PALM3A6NDB9 RNU7-104P-201ENST00000459398 79 ntBASIC1.56□□□□□ -2.16
PALM3A6NDB9 RNU6-719P-201ENST00000516671 104 ntBASIC1.56□□□□□ -2.16
PALM3A6NDB9 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
PALM3A6NDB9 AC004223.1-201ENST00000479840 271 ntBASIC1.55□□□□□ -2.16
PALM3A6NDB9 RNU7-161P-201ENST00000517289 62 ntBASIC1.55□□□□□ -2.16
PALM3A6NDB9 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
PALM3A6NDB9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
PALM3A6NDB9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
PALM3A6NDB9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
PALM3A6NDB9 Y_RNA.12-201ENST00000362393 112 ntBASIC1.54□□□□□ -2.16
PALM3A6NDB9 RNA5SP255-201ENST00000516370 107 ntBASIC1.54□□□□□ -2.16
PALM3A6NDB9 RNU6-807P-201ENST00000516805 107 ntBASIC1.54□□□□□ -2.16
PALM3A6NDB9 MIR8070-201ENST00000616510 88 ntBASIC1.54□□□□□ -2.16
PALM3A6NDB9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.54□□□□□ -2.16
PALM3A6NDB9 MIR573-201ENST00000384964 99 ntBASIC1.53□□□□□ -2.16
PALM3A6NDB9 YWHAEP2-201ENST00000580066 112 ntBASIC1.53□□□□□ -2.16
PALM3A6NDB9 YWHAEP3-201ENST00000582767 121 ntBASIC1.53□□□□□ -2.16
PALM3A6NDB9 MIR4484-201ENST00000582855 83 ntBASIC1.53□□□□□ -2.16
PALM3A6NDB9 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
PALM3A6NDB9 RNU6-1229P-201ENST00000364295 107 ntBASIC1.52□□□□□ -2.17
PALM3A6NDB9 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
PALM3A6NDB9 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
PALM3A6NDB9 AL353770.2-201ENST00000620024 78 ntBASIC1.52□□□□□ -2.17
PALM3A6NDB9 AC067863.3-201ENST00000624172 122 ntBASIC1.52□□□□□ -2.17
PALM3A6NDB9 MIR1297-201ENST00000637311 77 ntBASIC1.52□□□□□ -2.17
PALM3A6NDB9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.51□□□□□ -2.17
PALM3A6NDB9 SNORA40.6-201ENST00000391153 128 ntBASIC1.51□□□□□ -2.17
PALM3A6NDB9 MIR2113-201ENST00000459007 91 ntBASIC1.51□□□□□ -2.17
PALM3A6NDB9 RNU6-303P-201ENST00000517091 106 ntBASIC1.51□□□□□ -2.17
PALM3A6NDB9 MIR3920-201ENST00000581751 86 ntBASIC1.51□□□□□ -2.17
PALM3A6NDB9 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.51□□□□□ -2.17
PALM3A6NDB9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.5□□□□□ -2.17
PALM3A6NDB9 RNU6-392P-201ENST00000364926 101 ntBASIC1.5□□□□□ -2.17
PALM3A6NDB9 Y_RNA.371-201ENST00000365591 113 ntBASIC1.5□□□□□ -2.17
PALM3A6NDB9 SCARNA18B-201ENST00000458806 135 ntBASIC1.5□□□□□ -2.17
PALM3A6NDB9 MIR3612-201ENST00000579753 87 ntBASIC1.5□□□□□ -2.17
PALM3A6NDB9 MIR4639-201ENST00000584938 69 ntBASIC1.5□□□□□ -2.17
PALM3A6NDB9 MIR6078-201ENST00000611069 100 ntBASIC1.5□□□□□ -2.17
PALM3A6NDB9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PALM3A6NDB9 RNU6-1126P-201ENST00000384002 107 ntBASIC1.49□□□□□ -2.17
PALM3A6NDB9 U3.27-201ENST00000391237 200 ntBASIC1.49□□□□□ -2.17
PALM3A6NDB9 AC244669.1-204ENST00000621564 178 ntBASIC1.49□□□□□ -2.17
PALM3A6NDB9 Y_RNA.788-201ENST00000622394 112 ntBASIC1.49□□□□□ -2.17
PALM3A6NDB9 Y_RNA.532-201ENST00000384590 113 ntBASIC1.48□□□□□ -2.17
PALM3A6NDB9 RNU6-939P-201ENST00000384634 107 ntBASIC1.48□□□□□ -2.17
PALM3A6NDB9 SNORD28-201ENST00000384706 75 ntBASIC1.48□□□□□ -2.17
PALM3A6NDB9 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
PALM3A6NDB9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
PALM3A6NDB9 AC097510.1-201ENST00000510945 133 ntBASIC1.47□□□□□ -2.17
PALM3A6NDB9 MIR3678-201ENST00000578455 94 ntBASIC1.47□□□□□ -2.17
PALM3A6NDB9 MIR548AG2-201ENST00000581228 64 ntBASIC1.47□□□□□ -2.17
PALM3A6NDB9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
PALM3A6NDB9 Y_RNA.545-201ENST00000384652 105 ntBASIC1.46□□□□□ -2.18
PALM3A6NDB9 Y_RNA.565-201ENST00000384719 101 ntBASIC1.46□□□□□ -2.18
PALM3A6NDB9 MIR617-201ENST00000385030 97 ntBASIC1.46□□□□□ -2.18
PALM3A6NDB9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PALM3A6NDB9 MIR548L-201ENST00000408303 86 ntBASIC1.46□□□□□ -2.18
PALM3A6NDB9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.46□□□□□ -2.18
PALM3A6NDB9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.46□□□□□ -2.18
PALM3A6NDB9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.46□□□□□ -2.18
PALM3A6NDB9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PALM3A6NDB9 RNU6-340P-201ENST00000364005 107 ntBASIC1.45□□□□□ -2.18
PALM3A6NDB9 SNORA24B-201ENST00000384176 131 ntBASIC1.45□□□□□ -2.18
PALM3A6NDB9 RNU2-59P-201ENST00000410482 191 ntBASIC1.45□□□□□ -2.18
PALM3A6NDB9 SNORD18A-201ENST00000363753 72 ntBASIC1.44□□□□□ -2.18
PALM3A6NDB9 RNU6-681P-201ENST00000364012 104 ntBASIC1.44□□□□□ -2.18
PALM3A6NDB9 RNU4-45P-201ENST00000365469 141 ntBASIC1.44□□□□□ -2.18
PALM3A6NDB9 SNORD99-201ENST00000408612 74 ntBASIC1.44□□□□□ -2.18
PALM3A6NDB9 MIR3134-201ENST00000579433 74 ntBASIC1.44□□□□□ -2.18
PALM3A6NDB9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.43□□□□□ -2.18
PALM3A6NDB9 MIR216B-201ENST00000390186 82 ntBASIC1.43□□□□□ -2.18
PALM3A6NDB9 AC074348.1-201ENST00000426503 132 ntBASIC1.43□□□□□ -2.18
PALM3A6NDB9 AC073261.1-201ENST00000429409 121 ntBASIC1.43□□□□□ -2.18
PALM3A6NDB9 AC011195.1-201ENST00000578177 177 ntBASIC1.43□□□□□ -2.18
PALM3A6NDB9 MIR4661-201ENST00000582720 75 ntBASIC1.43□□□□□ -2.18
PALM3A6NDB9 RNU6-1177P-201ENST00000391058 104 ntBASIC1.42□□□□□ -2.18
PALM3A6NDB9 Y_RNA.681-201ENST00000516445 113 ntBASIC1.42□□□□□ -2.18
PALM3A6NDB9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.42□□□□□ -2.18
PALM3A6NDB9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.42□□□□□ -2.18
PALM3A6NDB9 MIR6504-201ENST00000613520 61 ntBASIC1.42□□□□□ -2.18
PALM3A6NDB9 RNU6-824P-201ENST00000363724 104 ntBASIC1.41□□□□□ -2.18
PALM3A6NDB9 Y_RNA.606-201ENST00000410579 103 ntBASIC1.41□□□□□ -2.18
PALM3A6NDB9 RNU7-74P-201ENST00000459104 62 ntBASIC1.41□□□□□ -2.18
PALM3A6NDB9 RNU6-70P-201ENST00000516438 60 ntBASIC1.41□□□□□ -2.18
PALM3A6NDB9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.4□□□□□ -2.19
PALM3A6NDB9 RNU6-411P-201ENST00000384451 107 ntBASIC1.4□□□□□ -2.19
PALM3A6NDB9 MIR519E-201ENST00000385075 84 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms