Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL161932.1-201ENST00000437408 146 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 snoU13.11-201ENST00000459219 104 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 SNORA72.7-201ENST00000516349 94 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-765P-201ENST00000516916 99 ntBASIC1.08□□□□□ -2.24
PCDHB1Q9Y5F3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-573P-201ENST00000383938 106 ntBASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-480P-201ENST00000384332 107 ntBASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 MIR450A2-201ENST00000385022 100 ntBASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 SNORD105-201ENST00000386910 85 ntBASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 RNU7-195P-201ENST00000458793 62 ntBASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 RNU7-85P-201ENST00000458851 63 ntBASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.07□□□□□ -2.24
PCDHB1Q9Y5F3 MIR101-2-201ENST00000362195 79 ntBASIC1.06□□□□□ -2.24
PCDHB1Q9Y5F3 SNORD36A-201ENST00000362874 73 ntBASIC1.06□□□□□ -2.24
PCDHB1Q9Y5F3 SNORD116-22-201ENST00000384430 92 ntBASIC1.06□□□□□ -2.24
PCDHB1Q9Y5F3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.06□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-291P-201ENST00000384720 107 ntBASIC1.06□□□□□ -2.24
PCDHB1Q9Y5F3 Y_RNA.620-201ENST00000411009 88 ntBASIC1.06□□□□□ -2.24
PCDHB1Q9Y5F3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.06□□□□□ -2.24
PCDHB1Q9Y5F3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
PCDHB1Q9Y5F3 RNY1P1-201ENST00000364372 112 ntBASIC1.05□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.05□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-675P-201ENST00000384236 104 ntBASIC1.05□□□□□ -2.24
PCDHB1Q9Y5F3 MIR1302-4-201ENST00000408701 150 ntBASIC1.05□□□□□ -2.24
PCDHB1Q9Y5F3 AC092628.1-201ENST00000436250 252 ntBASIC1.05□□□□□ -2.24
PCDHB1Q9Y5F3 AC022137.1-201ENST00000483735 151 ntBASIC1.05□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-448P-201ENST00000517052 107 ntBASIC1.05□□□□□ -2.24
PCDHB1Q9Y5F3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.05□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-497P-201ENST00000365316 104 ntBASIC1.04□□□□□ -2.24
PCDHB1Q9Y5F3 MIR520H-201ENST00000385126 88 ntBASIC1.04□□□□□ -2.24
PCDHB1Q9Y5F3 AL606490.4-201ENST00000423117 127 ntBASIC1.04□□□□□ -2.24
PCDHB1Q9Y5F3 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-957P-201ENST00000363652 99 ntBASIC1.03□□□□□ -2.24
PCDHB1Q9Y5F3 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
PCDHB1Q9Y5F3 IGLL4P-201ENST00000614590 133 ntBASIC1.03□□□□□ -2.24
PCDHB1Q9Y5F3 RNU6-535P-201ENST00000384722 107 ntBASIC1.02□□□□□ -2.25
PCDHB1Q9Y5F3 MIR635-201ENST00000384830 98 ntBASIC1.02□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.02□□□□□ -2.25
PCDHB1Q9Y5F3 SNORD4B-201ENST00000459083 72 ntBASIC1.02□□□□□ -2.25
PCDHB1Q9Y5F3 AP003327.1-201ENST00000529684 127 ntBASIC1.02□□□□□ -2.25
PCDHB1Q9Y5F3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-243P-201ENST00000391140 107 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-519P-201ENST00000410590 108 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 RNU7-153P-201ENST00000516455 62 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 MIR548BB-201ENST00000626714 66 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 MIR1245B-201ENST00000636115 69 ntBASIC1.01□□□□□ -2.25
PCDHB1Q9Y5F3 RNU4-32P-201ENST00000363404 141 ntBASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-509P-201ENST00000363519 107 ntBASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-1152P-201ENST00000384576 107 ntBASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 Y_RNA.648-201ENST00000459455 110 ntBASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-75P-201ENST00000515944 104 ntBASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 SNORA31.14-201ENST00000516728 116 ntBASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 MIR5000-201ENST00000577717 103 ntBASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 MIR548H5-201ENST00000580314 60 ntBASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
PCDHB1Q9Y5F3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-633P-201ENST00000362612 103 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 Y_RNA.283-201ENST00000364798 112 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-132P-201ENST00000383863 107 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-820P-201ENST00000384273 107 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 Y_RNA.809-201ENST00000516058 95 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 MIR5588-201ENST00000581890 63 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 RNU7-10P-201ENST00000607194 63 ntBASIC0.99□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-979P-201ENST00000383896 107 ntBASIC0.98□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-524P-201ENST00000384270 107 ntBASIC0.98□□□□□ -2.25
PCDHB1Q9Y5F3 RNA5SP292-201ENST00000390974 118 ntBASIC0.98□□□□□ -2.25
PCDHB1Q9Y5F3 SNORD99-201ENST00000408612 74 ntBASIC0.98□□□□□ -2.25
PCDHB1Q9Y5F3 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
PCDHB1Q9Y5F3 uc_338.16-201ENST00000621804 95 ntBASIC0.98□□□□□ -2.25
PCDHB1Q9Y5F3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.98□□□□□ -2.25
PCDHB1Q9Y5F3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.98□□□□□ -2.25
PCDHB1Q9Y5F3 MIRLET7F1-201ENST00000362202 87 ntBASIC0.97□□□□□ -2.25
PCDHB1Q9Y5F3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.97□□□□□ -2.25
PCDHB1Q9Y5F3 RNA5SP117-201ENST00000365294 118 ntBASIC0.97□□□□□ -2.25
PCDHB1Q9Y5F3 MIR573-201ENST00000384964 99 ntBASIC0.97□□□□□ -2.25
PCDHB1Q9Y5F3 MIR599-201ENST00000385069 95 ntBASIC0.97□□□□□ -2.25
PCDHB1Q9Y5F3 AL353765.1-201ENST00000605514 183 ntBASIC0.97□□□□□ -2.25
PCDHB1Q9Y5F3 AC006160.2-201ENST00000637708 154 ntBASIC0.97□□□□□ -2.25
PCDHB1Q9Y5F3 RNU6-787P-201ENST00000384032 107 ntBASIC0.96□□□□□ -2.26
PCDHB1Q9Y5F3 MIR644A-201ENST00000385262 94 ntBASIC0.96□□□□□ -2.26
PCDHB1Q9Y5F3 AC002350.1-201ENST00000490759 375 ntBASIC0.96□□□□□ -2.26
PCDHB1Q9Y5F3 CYP3A137P-201ENST00000562436 69 ntBASIC0.96□□□□□ -2.26
PCDHB1Q9Y5F3 TRDV1-202ENST00000621643 102 ntBASIC0.96□□□□□ -2.26
PCDHB1Q9Y5F3 U6.100-201ENST00000636230 99 ntBASIC0.96□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 RNU6-1276P-201ENST00000365372 104 ntBASIC0.95□□□□□ -2.26
PCDHB1Q9Y5F3 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms