Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AL354695.1-201ENST00000427935 228 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 FABP5P4-201ENST00000437203 171 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 Y_RNA.809-201ENST00000516058 95 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 AC022709.1-201ENST00000615967 87 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 AC006160.2-201ENST00000637708 154 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 RNA5SP245-201ENST00000364239 121 ntBASIC1.19□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-1276P-201ENST00000365372 104 ntBASIC1.19□□□□□ -2.22
CDC42EP3Q9UKI2 MIR519C-201ENST00000385053 87 ntBASIC1.19□□□□□ -2.22
CDC42EP3Q9UKI2 AC244505.6-201ENST00000452829 130 ntBASIC1.19□□□□□ -2.22
CDC42EP3Q9UKI2 AL136317.1-201ENST00000612653 226 ntBASIC1.19□□□□□ -2.22
CDC42EP3Q9UKI2 uc_338.16-201ENST00000621804 95 ntBASIC1.19□□□□□ -2.22
CDC42EP3Q9UKI2 Y_RNA.219-201ENST00000364232 113 ntBASIC1.18□□□□□ -2.22
CDC42EP3Q9UKI2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CDC42EP3Q9UKI2 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
CDC42EP3Q9UKI2 MIR4536-1-201ENST00000583537 88 ntBASIC1.18□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-957P-201ENST00000363652 99 ntBASIC1.17□□□□□ -2.22
CDC42EP3Q9UKI2 Y_RNA.426-201ENST00000384068 113 ntBASIC1.17□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-242P-201ENST00000384359 107 ntBASIC1.17□□□□□ -2.22
CDC42EP3Q9UKI2 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-466P-201ENST00000391224 103 ntBASIC1.17□□□□□ -2.22
CDC42EP3Q9UKI2 MIR1304-201ENST00000408243 91 ntBASIC1.17□□□□□ -2.22
CDC42EP3Q9UKI2 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
CDC42EP3Q9UKI2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.17□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-787P-201ENST00000384032 107 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-524P-201ENST00000384270 107 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 MIR599-201ENST00000385069 95 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 MIR1236-201ENST00000408340 102 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 Y_RNA.611-201ENST00000410682 108 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 MIR4666B-201ENST00000578142 81 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 MIR1245B-201ENST00000636115 69 ntBASIC1.16□□□□□ -2.22
CDC42EP3Q9UKI2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.15□□□□□ -2.23
CDC42EP3Q9UKI2 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
CDC42EP3Q9UKI2 SNORD89-201ENST00000390981 114 ntBASIC1.15□□□□□ -2.23
CDC42EP3Q9UKI2 AC093729.1-201ENST00000513074 128 ntBASIC1.15□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6-65P-201ENST00000516332 98 ntBASIC1.15□□□□□ -2.23
CDC42EP3Q9UKI2 PVT1_3.1-201ENST00000620853 95 ntBASIC1.15□□□□□ -2.23
CDC42EP3Q9UKI2 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 MIR520H-201ENST00000385126 88 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 RPS29P1-201ENST00000465274 159 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 AC002350.1-201ENST00000490759 375 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6-1265P-201ENST00000516342 103 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 SNORA31.14-201ENST00000516728 116 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 MTRNR2L2-201ENST00000604882 87 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 TRDV1-202ENST00000621643 102 ntBASIC1.14□□□□□ -2.23
CDC42EP3Q9UKI2 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 SNORD78.1-201ENST00000390866 65 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 Y_RNA.607-201ENST00000410597 98 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 AL606490.4-201ENST00000423117 127 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 RNA5SP61-201ENST00000516453 100 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 Y_RNA.685-201ENST00000516532 108 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 AC140658.3-201ENST00000567603 271 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 MIR151B-201ENST00000584249 96 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 MIR3202-2-201ENST00000635980 79 ntBASIC1.13□□□□□ -2.23
CDC42EP3Q9UKI2 MIR96-201ENST00000362288 78 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 RNU4-32P-201ENST00000363404 141 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6-132P-201ENST00000383863 107 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6-811P-201ENST00000384069 107 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6-1275P-201ENST00000391087 107 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 MIR942-201ENST00000401111 86 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 RNU7-153P-201ENST00000516455 62 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 MIR3064-201ENST00000581130 66 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 AC025627.3-201ENST00000582078 182 ntBASIC1.12□□□□□ -2.23
CDC42EP3Q9UKI2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
CDC42EP3Q9UKI2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.11□□□□□ -2.23
CDC42EP3Q9UKI2 RNA5SP255-201ENST00000516370 107 ntBASIC1.11□□□□□ -2.23
CDC42EP3Q9UKI2 RNA5SP395-201ENST00000516567 118 ntBASIC1.11□□□□□ -2.23
CDC42EP3Q9UKI2 AC104996.3-201ENST00000590718 94 ntBASIC1.11□□□□□ -2.23
CDC42EP3Q9UKI2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.11□□□□□ -2.23
CDC42EP3Q9UKI2 MIR6788-201ENST00000618842 66 ntBASIC1.11□□□□□ -2.23
CDC42EP3Q9UKI2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6-228P-201ENST00000362700 106 ntBASIC1.1□□□□□ -2.23
CDC42EP3Q9UKI2 SNORD114-27-201ENST00000363766 70 ntBASIC1.1□□□□□ -2.23
CDC42EP3Q9UKI2 SNORD115-37-201ENST00000363768 82 ntBASIC1.1□□□□□ -2.23
CDC42EP3Q9UKI2 RNU1-93P-201ENST00000364704 169 ntBASIC1.1□□□□□ -2.23
CDC42EP3Q9UKI2 RNA5SP292-201ENST00000390974 118 ntBASIC1.1□□□□□ -2.23
CDC42EP3Q9UKI2 RNA5SP403-201ENST00000363598 108 ntBASIC1.09□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
CDC42EP3Q9UKI2 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
CDC42EP3Q9UKI2 MIR548U-201ENST00000390728 81 ntBASIC1.09□□□□□ -2.23
CDC42EP3Q9UKI2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.09□□□□□ -2.23
CDC42EP3Q9UKI2 SNORA25.13-201ENST00000516395 103 ntBASIC1.09□□□□□ -2.23
CDC42EP3Q9UKI2 RNU6-624P-201ENST00000363411 107 ntBASIC1.08□□□□□ -2.24
CDC42EP3Q9UKI2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.08□□□□□ -2.24
CDC42EP3Q9UKI2 RNU6-1124P-201ENST00000384169 107 ntBASIC1.08□□□□□ -2.24
CDC42EP3Q9UKI2 MIR573-201ENST00000384964 99 ntBASIC1.08□□□□□ -2.24
CDC42EP3Q9UKI2 SNORA18.5-201ENST00000516616 101 ntBASIC1.08□□□□□ -2.24
CDC42EP3Q9UKI2 MIR4696-201ENST00000581431 70 ntBASIC1.08□□□□□ -2.24
CDC42EP3Q9UKI2 U6.100-201ENST00000636230 99 ntBASIC1.08□□□□□ -2.24
CDC42EP3Q9UKI2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 RNU6-664P-201ENST00000362381 107 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.221-201ENST00000364248 96 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms