Protein–RNA interactions for Protein: Q9UK41

VPS28, Vacuolar protein sorting-associated protein 28 homolog, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28Q9UK41 RNU6-363P-201ENST00000362895 105 ntBASIC-0.32□□□□□ -2.46
VPS28Q9UK41 MIR617-201ENST00000385030 97 ntBASIC-0.32□□□□□ -2.46
VPS28Q9UK41 SPINT5P-201ENST00000448174 155 ntBASIC-0.32□□□□□ -2.46
VPS28Q9UK41 RNU6-243P-201ENST00000391140 107 ntBASIC-0.33□□□□□ -2.46
VPS28Q9UK41 MIR876-201ENST00000401147 81 ntBASIC-0.33□□□□□ -2.46
VPS28Q9UK41 RNU6-781P-201ENST00000516377 101 ntBASIC-0.33□□□□□ -2.46
VPS28Q9UK41 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.33□□□□□ -2.46
VPS28Q9UK41 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.33□□□□□ -2.46
VPS28Q9UK41 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.33□□□□□ -2.46
VPS28Q9UK41 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.34□□□□□ -2.46
VPS28Q9UK41 SNORD38.1-201ENST00000363863 68 ntBASIC-0.34□□□□□ -2.46
VPS28Q9UK41 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.34□□□□□ -2.46
VPS28Q9UK41 MIR519E-201ENST00000385075 84 ntBASIC-0.34□□□□□ -2.46
VPS28Q9UK41 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.34□□□□□ -2.46
VPS28Q9UK41 CR383656.4-201ENST00000546909 122 ntBASIC-0.34□□□□□ -2.46
VPS28Q9UK41 RNU6-90P-201ENST00000606352 106 ntBASIC-0.34□□□□□ -2.46
VPS28Q9UK41 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 RNY4P6-201ENST00000363667 96 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 RNU6-46P-201ENST00000383860 107 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 RNU6-409P-201ENST00000384114 104 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 RNU6-886P-201ENST00000384319 105 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 MIR516B1-201ENST00000385211 90 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 MIR214-201ENST00000385214 110 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 MIR548G-201ENST00000408442 89 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 MIR548AG2-201ENST00000581228 64 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.35□□□□□ -2.47
VPS28Q9UK41 AC069503.3-201ENST00000618674 145 ntBASIC-0.35□□□□□ -2.47
VPS28Q9UK41 MIR148A-201ENST00000362215 68 ntBASIC-0.36□□□□□ -2.47
VPS28Q9UK41 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.36□□□□□ -2.47
VPS28Q9UK41 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.36□□□□□ -2.47
VPS28Q9UK41 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.36□□□□□ -2.47
VPS28Q9UK41 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.37□□□□□ -2.47
VPS28Q9UK41 TRDV1-202ENST00000621643 102 ntBASIC-0.37□□□□□ -2.47
VPS28Q9UK41 SNORA18.1-201ENST00000363418 128 ntBASIC-0.38□□□□□ -2.47
VPS28Q9UK41 AC093423.1-201ENST00000440817 142 ntBASIC-0.38□□□□□ -2.47
VPS28Q9UK41 MIR2113-201ENST00000459007 91 ntBASIC-0.38□□□□□ -2.47
VPS28Q9UK41 MTND5P41-201ENST00000517498 206 ntBASIC-0.38□□□□□ -2.47
VPS28Q9UK41 MIR4473-201ENST00000583731 91 ntBASIC-0.38□□□□□ -2.47
VPS28Q9UK41 AC025166.1-201ENST00000612411 163 ntBASIC-0.38□□□□□ -2.47
VPS28Q9UK41 MIR6759-201ENST00000638110 65 ntBASIC-0.38□□□□□ -2.47
VPS28Q9UK41 SNORD36A-201ENST00000362874 73 ntBASIC-0.39□□□□□ -2.47
VPS28Q9UK41 SNORD58C-201ENST00000365223 64 ntBASIC-0.39□□□□□ -2.47
VPS28Q9UK41 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.39□□□□□ -2.47
VPS28Q9UK41 RNU6-426P-201ENST00000516464 97 ntBASIC-0.39□□□□□ -2.47
VPS28Q9UK41 RNU6-235P-201ENST00000362644 107 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 AC109327.2-201ENST00000448339 378 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 SNORD4A-201ENST00000459174 72 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.4□□□□□ -2.47
VPS28Q9UK41 RNU6-287P-201ENST00000516230 98 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 IGLVI-20-201ENST00000519296 130 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 MIR4460-201ENST00000577862 86 ntBASIC-0.4□□□□□ -2.47
VPS28Q9UK41 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.41□□□□□ -2.48
VPS28Q9UK41 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.41□□□□□ -2.48
VPS28Q9UK41 SNORA51.5-201ENST00000384126 131 ntBASIC-0.41□□□□□ -2.48
VPS28Q9UK41 AL353813.1-201ENST00000440700 253 ntBASIC-0.41□□□□□ -2.48
VPS28Q9UK41 YWHAEP2-201ENST00000580066 112 ntBASIC-0.41□□□□□ -2.48
VPS28Q9UK41 uc_338.10-201ENST00000621872 182 ntBASIC-0.41□□□□□ -2.48
VPS28Q9UK41 MTND5P18-201ENST00000445624 1801 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 SNORD114-31-201ENST00000363219 75 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 SNORD114-12-201ENST00000365400 75 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 RNU6-816P-201ENST00000390914 107 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 RNA5SP272-201ENST00000516095 111 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 AL442128.1-201ENST00000615151 90 ntBASIC-0.42□□□□□ -2.48
VPS28Q9UK41 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.43□□□□□ -2.48
VPS28Q9UK41 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.43□□□□□ -2.48
VPS28Q9UK41 MIR1912-201ENST00000410389 80 ntBASIC-0.43□□□□□ -2.48
VPS28Q9UK41 U6.100-201ENST00000636230 99 ntBASIC-0.43□□□□□ -2.48
VPS28Q9UK41 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.44□□□□□ -2.48
VPS28Q9UK41 AL161932.1-201ENST00000437408 146 ntBASIC-0.44□□□□□ -2.48
VPS28Q9UK41 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
VPS28Q9UK41 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.44□□□□□ -2.48
VPS28Q9UK41 AL162726.3-218ENST00000636401 95 ntBASIC-0.44□□□□□ -2.48
VPS28Q9UK41 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.45□□□□□ -2.48
VPS28Q9UK41 MIR181B2-201ENST00000385004 89 ntBASIC-0.45□□□□□ -2.48
VPS28Q9UK41 MTND4LP9-201ENST00000427694 174 ntBASIC-0.45□□□□□ -2.48
VPS28Q9UK41 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.46□□□□□ -2.48
VPS28Q9UK41 SNORA40-201ENST00000388090 126 ntBASIC-0.46□□□□□ -2.48
VPS28Q9UK41 RNU6-466P-201ENST00000391224 103 ntBASIC-0.46□□□□□ -2.48
VPS28Q9UK41 RNU7-188P-201ENST00000517063 64 ntBASIC-0.46□□□□□ -2.48
VPS28Q9UK41 AC096720.1-201ENST00000604441 183 ntBASIC-0.46□□□□□ -2.48
VPS28Q9UK41 RNU6-957P-201ENST00000363652 99 ntBASIC-0.47□□□□□ -2.48
VPS28Q9UK41 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.47□□□□□ -2.48
VPS28Q9UK41 MIR106A-201ENST00000384870 81 ntBASIC-0.47□□□□□ -2.48
VPS28Q9UK41 RNU7-200P-201ENST00000516105 62 ntBASIC-0.47□□□□□ -2.48
VPS28Q9UK41 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 RNA5SP275-201ENST00000363936 118 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 SNORD114-29-201ENST00000364819 70 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 SNORD49B-201ENST00000365172 72 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 MT-TY-201ENST00000387409 66 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 AC096531.1-201ENST00000419107 107 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.48□□□□□ -2.49
VPS28Q9UK41 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms