Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 MIR7107-201ENST00000611489 80 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 uc_338.28-201ENST00000612082 187 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 AC022709.1-201ENST00000615967 87 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.44□□□□□ -2.34
LIMA1Q9UHB6 RNU6-1260P-201ENST00000362944 107 ntBASIC0.43□□□□□ -2.34
LIMA1Q9UHB6 RNU6-1244P-201ENST00000363614 108 ntBASIC0.43□□□□□ -2.34
LIMA1Q9UHB6 RNU6-215P-201ENST00000365169 102 ntBASIC0.43□□□□□ -2.34
LIMA1Q9UHB6 AC109327.2-201ENST00000448339 378 ntBASIC0.43□□□□□ -2.34
LIMA1Q9UHB6 Y_RNA.809-201ENST00000516058 95 ntBASIC0.43□□□□□ -2.34
LIMA1Q9UHB6 RNU6-904P-201ENST00000516206 101 ntBASIC0.43□□□□□ -2.34
LIMA1Q9UHB6 MIR548Z-201ENST00000584743 97 ntBASIC0.43□□□□□ -2.34
LIMA1Q9UHB6 MIR6513-201ENST00000621188 64 ntBASIC0.43□□□□□ -2.34
LIMA1Q9UHB6 SNORD36A-201ENST00000362874 73 ntBASIC0.42□□□□□ -2.34
LIMA1Q9UHB6 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
LIMA1Q9UHB6 SNORD20-201ENST00000384550 80 ntBASIC0.42□□□□□ -2.34
LIMA1Q9UHB6 MIR7-2-201ENST00000384970 110 ntBASIC0.42□□□□□ -2.34
LIMA1Q9UHB6 MIR216A-201ENST00000385063 110 ntBASIC0.42□□□□□ -2.34
LIMA1Q9UHB6 Y_RNA.659-201ENST00000515994 113 ntBASIC0.42□□□□□ -2.34
LIMA1Q9UHB6 RNU6-1265P-201ENST00000516342 103 ntBASIC0.42□□□□□ -2.34
LIMA1Q9UHB6 RNA5SP268-201ENST00000516828 124 ntBASIC0.42□□□□□ -2.34
LIMA1Q9UHB6 Y_RNA.57-201ENST00000362806 113 ntBASIC0.41□□□□□ -2.34
LIMA1Q9UHB6 Y_RNA.221-201ENST00000364248 96 ntBASIC0.41□□□□□ -2.34
LIMA1Q9UHB6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.41□□□□□ -2.34
LIMA1Q9UHB6 MIR4777-201ENST00000583710 86 ntBASIC0.41□□□□□ -2.34
LIMA1Q9UHB6 AC096720.1-201ENST00000604441 183 ntBASIC0.41□□□□□ -2.34
LIMA1Q9UHB6 AC012531.4-201ENST00000616509 177 ntBASIC0.41□□□□□ -2.34
LIMA1Q9UHB6 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
LIMA1Q9UHB6 Y_RNA.78-201ENST00000362970 110 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 Y_RNA.95-201ENST00000363079 95 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 SNORD114-26-201ENST00000363543 72 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 RNU6-726P-201ENST00000364680 107 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 RNU6-524P-201ENST00000384270 107 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 Y_RNA.467-201ENST00000384297 102 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 MIR590-201ENST00000385008 97 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 Y_RNA.601-201ENST00000410500 113 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 RNU7-104P-201ENST00000459398 79 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 RNU6-795P-201ENST00000516323 103 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 RNU6-86P-201ENST00000606534 107 ntBASIC0.4□□□□□ -2.35
LIMA1Q9UHB6 SNORD45B-201ENST00000364617 72 ntBASIC0.39□□□□□ -2.35
LIMA1Q9UHB6 MIR181B2-201ENST00000385004 89 ntBASIC0.39□□□□□ -2.35
LIMA1Q9UHB6 RNU6-1254P-201ENST00000391266 104 ntBASIC0.39□□□□□ -2.35
LIMA1Q9UHB6 MIR548AI-201ENST00000579940 88 ntBASIC0.39□□□□□ -2.35
LIMA1Q9UHB6 RN7SL793P-201ENST00000583259 296 ntBASIC0.39□□□□□ -2.35
LIMA1Q9UHB6 AC025521.1-201ENST00000621624 286 ntBASIC0.39□□□□□ -2.35
LIMA1Q9UHB6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.39□□□□□ -2.35
LIMA1Q9UHB6 RNU4-36P-201ENST00000364294 144 ntBASIC0.38□□□□□ -2.35
LIMA1Q9UHB6 RNU6-716P-201ENST00000365621 103 ntBASIC0.38□□□□□ -2.35
LIMA1Q9UHB6 RNY1P4-201ENST00000384595 115 ntBASIC0.38□□□□□ -2.35
LIMA1Q9UHB6 AL161932.1-201ENST00000437408 146 ntBASIC0.38□□□□□ -2.35
LIMA1Q9UHB6 RNA5SP227-201ENST00000516184 113 ntBASIC0.38□□□□□ -2.35
LIMA1Q9UHB6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.38□□□□□ -2.35
LIMA1Q9UHB6 MIR4439-201ENST00000583746 80 ntBASIC0.38□□□□□ -2.35
LIMA1Q9UHB6 RNU1-29P-201ENST00000606574 126 ntBASIC0.38□□□□□ -2.35
LIMA1Q9UHB6 RNU6-755P-201ENST00000364400 103 ntBASIC0.37□□□□□ -2.35
LIMA1Q9UHB6 RNU6-1126P-201ENST00000384002 107 ntBASIC0.37□□□□□ -2.35
LIMA1Q9UHB6 SNORD41.1-201ENST00000391000 69 ntBASIC0.37□□□□□ -2.35
LIMA1Q9UHB6 MIR936-201ENST00000401264 98 ntBASIC0.37□□□□□ -2.35
LIMA1Q9UHB6 MIR1302-5-201ENST00000408164 150 ntBASIC0.37□□□□□ -2.35
LIMA1Q9UHB6 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 MIR103A1-201ENST00000362165 78 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 Y_RNA.10-201ENST00000362371 110 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 SNORA63.4-201ENST00000362763 126 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 RNU6-957P-201ENST00000363652 99 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 SNORA51.5-201ENST00000384126 131 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 MIR193B-201ENST00000384907 83 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 AC069271.1-201ENST00000445577 156 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 SCARNA23-201ENST00000516060 130 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 RNU6-109P-201ENST00000516364 107 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 RNU6-184P-201ENST00000516514 107 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 RNU6-919P-201ENST00000516731 104 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 MIR3920-201ENST00000581751 86 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 MIR6755-201ENST00000619993 66 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 AL162376.1-201ENST00000624117 175 ntBASIC0.36□□□□□ -2.35
LIMA1Q9UHB6 MIR450A1-201ENST00000362262 91 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 RNU6-766P-201ENST00000362478 107 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 RNU6-1125P-201ENST00000363601 107 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 RNU6-756P-201ENST00000383997 107 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 RNU6-480P-201ENST00000384332 107 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 RNU6-813P-201ENST00000384691 107 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 RNU6-243P-201ENST00000391140 107 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 snoU13.11-201ENST00000459219 104 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 RNA5SP436-201ENST00000516020 115 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 AL513043.2-201ENST00000573941 143 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 MIR548AG2-201ENST00000581228 64 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 AC103810.7-201ENST00000607821 91 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 TRDV1-202ENST00000621643 102 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 U6.100-201ENST00000636230 99 ntBASIC0.35□□□□□ -2.35
LIMA1Q9UHB6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.34□□□□□ -2.36
LIMA1Q9UHB6 MIR4711-201ENST00000578274 70 ntBASIC0.34□□□□□ -2.36
LIMA1Q9UHB6 MIR4752-201ENST00000579672 72 ntBASIC0.34□□□□□ -2.36
LIMA1Q9UHB6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.34□□□□□ -2.36
LIMA1Q9UHB6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
LIMA1Q9UHB6 RNU6-44P-201ENST00000384045 107 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms